RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
TRAK1-202ENST00000341421 CCDC73Q6ZRK6 1079 aa13.94□□□□□ -0.18
TRAK1-202ENST00000341421 LIMCH1Q9UPQ0 1083 aa13.94□□□□□ -0.18
TRAK1-202ENST00000341421 TBX22Q9Y458 520 aa13.94□□□□□ -0.18
TRAK1-202ENST00000341421 NRXN1Q9ULB1 1477 aa13.94□□□□□ -0.18
TRAK1-202ENST00000341421 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
TRAK1-202ENST00000341421 HYPKQ9NX55 129 aa13.94□□□□□ -0.18
TRAK1-202ENST00000341421 CCDC9Q9Y3X0 531 aaKnown RBP13.94□□□□□ -0.18
TRAK1-202ENST00000341421 PPP4R3BQ5MIZ7 849 aa13.94□□□□□ -0.18
TRAK1-202ENST00000341421 LARP1Q6PKG0 1096 aaKnown RBP13.94□□□□□ -0.18
TRAK1-202ENST00000341421 TMX3Q96JJ7 454 aa13.94□□□□□ -0.18
TRAK1-202ENST00000341421 KRT24Q2M2I5 525 aa13.93□□□□□ -0.18
TRAK1-202ENST00000341421 NEUROD6Q96NK8 337 aa13.93□□□□□ -0.18
TRAK1-202ENST00000341421 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
TRAK1-202ENST00000341421 CEBPAP49715 358 aaPredicted RBP13.93□□□□□ -0.18
TRAK1-202ENST00000341421 KIF20AO95235 890 aa13.93□□□□□ -0.18
TRAK1-202ENST00000341421 CCDC192P0DO97 292 aa13.93□□□□□ -0.18
TRAK1-202ENST00000341421 CASTP20810 708 aaKnown RBP13.93□□□□□ -0.18
TRAK1-202ENST00000341421 ZNF445P59923 1031 aa13.93□□□□□ -0.18
TRAK1-202ENST00000341421 LARP1BQ659C4 914 aaKnown RBP13.93□□□□□ -0.18
TRAK1-202ENST00000341421 EYA1Q99502 592 aa13.93□□□□□ -0.18
TRAK1-202ENST00000341421 ECHDC1Q9NTX5 307 aa13.93□□□□□ -0.18
TRAK1-202ENST00000341421 CPLX1O14810 134 aa13.92□□□□□ -0.18
TRAK1-202ENST00000341421 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
TRAK1-202ENST00000341421 ARHGEF10O15013 1369 aa13.92□□□□□ -0.18
TRAK1-202ENST00000341421 MAP3K5Q99683 1374 aa13.92□□□□□ -0.18
TRAK1-202ENST00000341421 CDK12Q9NYV4 1490 aaPredicted RBP13.92□□□□□ -0.18
TRAK1-202ENST00000341421 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
TRAK1-202ENST00000341421 TRDNQ13061 729 aa13.92□□□□□ -0.18
TRAK1-202ENST00000341421 MPNDQ8N594 471 aa13.92□□□□□ -0.18
TRAK1-202ENST00000341421 USHBP1Q8N6Y0 703 aa13.92□□□□□ -0.18
TRAK1-202ENST00000341421 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
TRAK1-202ENST00000341421 TMEM2Q9UHN6 1383 aa13.91□□□□□ -0.18
TRAK1-202ENST00000341421 ZNF853P0CG23 659 aa13.91□□□□□ -0.18
TRAK1-202ENST00000341421 EVI5LQ96CN4 794 aa13.91□□□□□ -0.18
TRAK1-202ENST00000341421 INTS4Q96HW7 963 aaKnown RBP13.91□□□□□ -0.18
TRAK1-202ENST00000341421 VWDEQ8N2E2 1590 aa13.91□□□□□ -0.18
TRAK1-202ENST00000341421 PI4KAP2A4QPH2 592 aa13.91□□□□□ -0.18
TRAK1-202ENST00000341421 CCDC183Q5T5S1 534 aa13.91□□□□□ -0.18
TRAK1-202ENST00000341421 PI4KAP1Q8N8J0 262 aa13.91□□□□□ -0.18
TRAK1-202ENST00000341421 DNAJC2Q99543 621 aaKnown RBP13.9□□□□□ -0.18
TRAK1-202ENST00000341421 SIL1Q9H173 461 aa13.9□□□□□ -0.18
TRAK1-202ENST00000341421 DEPDC5O75140 1603 aa13.9□□□□□ -0.18
TRAK1-202ENST00000341421 ALDH1L1O75891 902 aa13.9□□□□□ -0.18
TRAK1-202ENST00000341421 EVA1CP58658 441 aa13.9□□□□□ -0.18
TRAK1-202ENST00000341421 PNPLA6Q8IY17 1366 aa13.9□□□□□ -0.18
TRAK1-202ENST00000341421 RALYLQ86SE5 291 aaKnown RBP13.89□□□□□ -0.19
TRAK1-202ENST00000341421 RBSNQ9H1K0 784 aa13.89□□□□□ -0.19
TRAK1-202ENST00000341421 RBM27Q9P2N5 1060 aaKnown RBP13.89□□□□□ -0.19
TRAK1-202ENST00000341421 AOX1Q06278 1338 aa13.89□□□□□ -0.19
TRAK1-202ENST00000341421 PTCH1Q13635 1447 aa13.89□□□□□ -0.19
TRAK1-202ENST00000341421 TULP4Q9NRJ4 1543 aa13.89□□□□□ -0.19
TRAK1-202ENST00000341421 FOXO3O43524 673 aa13.89□□□□□ -0.19
TRAK1-202ENST00000341421 UTP14CQ5TAP6 766 aaKnown RBP13.89□□□□□ -0.19
TRAK1-202ENST00000341421 PRPF40BQ6NWY9 871 aaKnown RBP13.89□□□□□ -0.19
TRAK1-202ENST00000341421 MPRIPQ6WCQ1 1025 aa13.89□□□□□ -0.19
TRAK1-202ENST00000341421 SYNE3Q6ZMZ3 975 aa13.89□□□□□ -0.19
TRAK1-202ENST00000341421 CABP4P57796 275 aa13.88□□□□□ -0.19
TRAK1-202ENST00000341421 TSHZ3Q63HK5 1081 aa13.88□□□□□ -0.19
TRAK1-202ENST00000341421 HOXB7P09629 217 aa13.88□□□□□ -0.19
TRAK1-202ENST00000341421 TRIM29Q14134 588 aa13.88□□□□□ -0.19
TRAK1-202ENST00000341421 ZNF396Q96N95 335 aaPredicted RBP13.88□□□□□ -0.19
TRAK1-202ENST00000341421 NAT10Q9H0A0 1025 aaKnown RBP13.88□□□□□ -0.19
TRAK1-202ENST00000341421 EPB41L2O43491 1005 aaKnown RBP13.88□□□□□ -0.19
TRAK1-202ENST00000341421 DHX16O60231 1041 aaKnown RBP13.88□□□□□ -0.19
TRAK1-202ENST00000341421 MYL6BP14649 208 aa13.88□□□□□ -0.19
TRAK1-202ENST00000341421 AKAP4Q5JQC9 854 aa13.88□□□□□ -0.19
TRAK1-202ENST00000341421 CGNQ9P2M7 1197 aaKnown RBP13.88□□□□□ -0.19
TRAK1-202ENST00000341421 IQSEC2Q5JU85 1478 aa13.88□□□□□ -0.19
TRAK1-202ENST00000341421 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
TRAK1-202ENST00000341421 TTC41PQ6P2S7 1318 aa13.87□□□□□ -0.19
TRAK1-202ENST00000341421 CHMLP26374 656 aa13.87□□□□□ -0.19
TRAK1-202ENST00000341421 HOXC9P31274 260 aa13.87□□□□□ -0.19
TRAK1-202ENST00000341421 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
TRAK1-202ENST00000341421 MYRIPQ8NFW9 859 aa13.87□□□□□ -0.19
TRAK1-202ENST00000341421 RTL1A6NKG5 1358 aa13.87□□□□□ -0.19
TRAK1-202ENST00000341421 DMTNQ08495 405 aa13.87□□□□□ -0.19
TRAK1-202ENST00000341421 CAMSAP1Q5T5Y3 1602 aa13.87□□□□□ -0.19
TRAK1-202ENST00000341421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
TRAK1-202ENST00000341421 MAP3K2Q9Y2U5 619 aa13.87□□□□□ -0.19
TRAK1-202ENST00000341421 STX6O43752 255 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 WASHC4Q2M389 1173 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 G2E3Q7L622 706 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 SCAND2PQ9GZW5 306 aaPredicted RBP13.86□□□□□ -0.19
TRAK1-202ENST00000341421 TNMDQ9H2S6 317 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 CFAP45Q9UL16 551 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 KINO60870 393 aaKnown RBP13.86□□□□□ -0.19
TRAK1-202ENST00000341421 NOLC1Q14978 699 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRAK1-202ENST00000341421 METP08581 1390 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 KIDINS220Q9ULH0 1771 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 CREBRFQ8IUR6 639 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 NUP62CLQ9H1M0 184 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 UVSSAQ2YD98 709 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 TOMM22Q9NS69 142 aa13.86□□□□□ -0.19
TRAK1-202ENST00000341421 OTUD7AQ8TE49 926 aaPredicted RBP13.85□□□□□ -0.19
TRAK1-202ENST00000341421 SPATA32Q96LK8 384 aa13.85□□□□□ -0.19
TRAK1-202ENST00000341421 TRIM5Q9C035 493 aa13.85□□□□□ -0.19
TRAK1-202ENST00000341421 CPSF1Q10570 1443 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms