RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 SOS1Q07889 1333 aaPredicted RBP17.55■□□□□ 0.4
NECTIN1-203ENST00000341398 MRC1P22897 1456 aa17.55■□□□□ 0.4
NECTIN1-203ENST00000341398 KCNA3P22001 575 aa17.54■□□□□ 0.4
NECTIN1-203ENST00000341398 DDR1Q08345 913 aa17.54■□□□□ 0.4
NECTIN1-203ENST00000341398 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
NECTIN1-203ENST00000341398 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
NECTIN1-203ENST00000341398 HSPA6P17066 643 aa17.53■□□□□ 0.4
NECTIN1-203ENST00000341398 A0A087WZG4 1122 aa17.53■□□□□ 0.4
NECTIN1-203ENST00000341398 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
NECTIN1-203ENST00000341398 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
NECTIN1-203ENST00000341398 ZBTB1Q9Y2K1 713 aa17.53■□□□□ 0.4
NECTIN1-203ENST00000341398 COL15A1P39059 1388 aa17.52■□□□□ 0.4
NECTIN1-203ENST00000341398 ADAMTS7Q9UKP4 1686 aa17.52■□□□□ 0.4
NECTIN1-203ENST00000341398 KIF3CO14782 793 aa17.52■□□□□ 0.39
NECTIN1-203ENST00000341398 CANXP27824 592 aaKnown RBP17.52■□□□□ 0.39
NECTIN1-203ENST00000341398 C9orf131Q5VYM1 1079 aa17.51■□□□□ 0.39
NECTIN1-203ENST00000341398 KCPQ6ZWJ8 1503 aa17.51■□□□□ 0.39
NECTIN1-203ENST00000341398 TOMM70O94826 608 aa17.5■□□□□ 0.39
NECTIN1-203ENST00000341398 SERPINB2P05120 415 aa17.5■□□□□ 0.39
NECTIN1-203ENST00000341398 CHRNA5P30532 468 aa17.5■□□□□ 0.39
NECTIN1-203ENST00000341398 NFIXQ14938 502 aa17.5■□□□□ 0.39
NECTIN1-203ENST00000341398 ZNF790Q6PG37 636 aa17.5■□□□□ 0.39
NECTIN1-203ENST00000341398 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
NECTIN1-203ENST00000341398 UBR2Q8IWV8 1755 aa17.49■□□□□ 0.39
NECTIN1-203ENST00000341398 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
NECTIN1-203ENST00000341398 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
NECTIN1-203ENST00000341398 FMNL2Q96PY5 1086 aa17.48■□□□□ 0.39
NECTIN1-203ENST00000341398 COL3A1P02461 1466 aaPredicted RBP17.47■□□□□ 0.39
NECTIN1-203ENST00000341398 HEG1Q9ULI3 1381 aa17.47■□□□□ 0.39
NECTIN1-203ENST00000341398 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
NECTIN1-203ENST00000341398 EIF5P55010 431 aaKnown RBP17.47■□□□□ 0.39
NECTIN1-203ENST00000341398 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
NECTIN1-203ENST00000341398 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
NECTIN1-203ENST00000341398 H0YIN7 160 aa17.46■□□□□ 0.39
NECTIN1-203ENST00000341398 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
NECTIN1-203ENST00000341398 PDZRN3Q9UPQ7 1066 aa17.46■□□□□ 0.39
NECTIN1-203ENST00000341398 SBF1O95248 1867 aa17.45■□□□□ 0.38
NECTIN1-203ENST00000341398 BTBD11A6QL63 1104 aa17.45■□□□□ 0.38
NECTIN1-203ENST00000341398 PRKAR2BP31323 418 aa17.45■□□□□ 0.38
NECTIN1-203ENST00000341398 IL6STP40189 918 aaPredicted RBP17.45■□□□□ 0.38
NECTIN1-203ENST00000341398 APLP1P51693 650 aa17.45■□□□□ 0.38
NECTIN1-203ENST00000341398 BICDL1Q6ZP65 573 aa17.45■□□□□ 0.38
NECTIN1-203ENST00000341398 TTLL6Q8N841 843 aa17.45■□□□□ 0.38
NECTIN1-203ENST00000341398 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
NECTIN1-203ENST00000341398 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
NECTIN1-203ENST00000341398 C2CD5Q86YS7 1000 aa17.44■□□□□ 0.38
NECTIN1-203ENST00000341398 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
NECTIN1-203ENST00000341398 SIPA1L3O60292 1781 aaPredicted RBP17.44■□□□□ 0.38
NECTIN1-203ENST00000341398 NRXN2Q9P2S2 1712 aa17.44■□□□□ 0.38
NECTIN1-203ENST00000341398 U2AF1L5P0DN76 240 aaPredicted RBP17.43■□□□□ 0.38
NECTIN1-203ENST00000341398 U2AF1Q01081 240 aaKnown RBP eCLIP17.43■□□□□ 0.38
NECTIN1-203ENST00000341398 RSPH6AQ9H0K4 717 aa17.43■□□□□ 0.38
NECTIN1-203ENST00000341398 NPHP1O15259 732 aa17.42■□□□□ 0.38
NECTIN1-203ENST00000341398 PDE6BP35913 854 aa17.42■□□□□ 0.38
NECTIN1-203ENST00000341398 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
NECTIN1-203ENST00000341398 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
NECTIN1-203ENST00000341398 TBC1D2BQ9UPU7 963 aa17.42■□□□□ 0.38
NECTIN1-203ENST00000341398 CEMIPQ8WUJ3 1361 aa17.42■□□□□ 0.38
NECTIN1-203ENST00000341398 NEFMP07197 916 aa17.41■□□□□ 0.38
NECTIN1-203ENST00000341398 SETDB2Q96T68 719 aa17.41■□□□□ 0.38
NECTIN1-203ENST00000341398 ZC3H4Q9UPT8 1303 aaKnown RBP17.41■□□□□ 0.38
NECTIN1-203ENST00000341398 LMNB1P20700 586 aa17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 BRIP1Q9BX63 1249 aa17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 DLEC1Q9Y238 1755 aa17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 CCDC88AQ3V6T2 1871 aa17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 A1BGP04217 495 aa17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 ZNF622Q969S3 477 aaKnown RBP eCLIP17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 RRAGCQ9HB90 399 aa17.4■□□□□ 0.38
NECTIN1-203ENST00000341398 CARMIL3Q8ND23 1372 aa17.39■□□□□ 0.38
NECTIN1-203ENST00000341398 FSTL1Q12841 308 aa17.39■□□□□ 0.37
NECTIN1-203ENST00000341398 SNRPA1P09661 255 aaKnown RBP17.38■□□□□ 0.37
NECTIN1-203ENST00000341398 DZIP3Q86Y13 1208 aaKnown RBP17.38■□□□□ 0.37
NECTIN1-203ENST00000341398 KCNQ3O43525 872 aa17.37■□□□□ 0.37
NECTIN1-203ENST00000341398 ST5P78524 1137 aa17.37■□□□□ 0.37
NECTIN1-203ENST00000341398 RASSF7Q02833 373 aa17.37■□□□□ 0.37
NECTIN1-203ENST00000341398 CNBD1Q8NA66 436 aa17.37■□□□□ 0.37
NECTIN1-203ENST00000341398 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
NECTIN1-203ENST00000341398 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
NECTIN1-203ENST00000341398 TNRC6CQ9HCJ0 1690 aaKnown RBP17.36■□□□□ 0.37
NECTIN1-203ENST00000341398 PRR5LQ6MZQ0 368 aa17.36■□□□□ 0.37
NECTIN1-203ENST00000341398 CLEC4GQ6UXB4 293 aa17.36■□□□□ 0.37
NECTIN1-203ENST00000341398 MCM10Q7L590 875 aa17.36■□□□□ 0.37
NECTIN1-203ENST00000341398 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
NECTIN1-203ENST00000341398 GLTPD2A6NH11 291 aa17.35■□□□□ 0.37
NECTIN1-203ENST00000341398 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
NECTIN1-203ENST00000341398 TAF7Q15545 349 aaPredicted RBP17.35■□□□□ 0.37
NECTIN1-203ENST00000341398 DPY19L2Q6NUT2 758 aa17.35■□□□□ 0.37
NECTIN1-203ENST00000341398 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
NECTIN1-203ENST00000341398 VEGFAP15692 232 aaPredicted RBP17.34■□□□□ 0.37
NECTIN1-203ENST00000341398 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
NECTIN1-203ENST00000341398 ANKRD31Q8N7Z5 1873 aa17.33■□□□□ 0.37
NECTIN1-203ENST00000341398 SMC1BQ8NDV3 1235 aa17.33■□□□□ 0.36
NECTIN1-203ENST00000341398 C21orf2O43822 256 aa17.32■□□□□ 0.36
NECTIN1-203ENST00000341398 SOGA3Q5TF21 947 aa17.32■□□□□ 0.36
NECTIN1-203ENST00000341398 STYK1Q6J9G0 422 aa17.32■□□□□ 0.36
NECTIN1-203ENST00000341398 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
NECTIN1-203ENST00000341398 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms