RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 VIRMAQ69YN4 1812 aaKnown RBP22.64■■□□□ 1.21
NECTIN1-202ENST00000340882 ZC3H4Q9UPT8 1303 aaKnown RBP22.63■■□□□ 1.21
NECTIN1-202ENST00000340882 LMNB1P20700 586 aa22.63■■□□□ 1.21
NECTIN1-202ENST00000340882 NFIXQ14938 502 aa22.62■■□□□ 1.21
NECTIN1-202ENST00000340882 DNAJC10Q8IXB1 793 aa22.62■■□□□ 1.21
NECTIN1-202ENST00000340882 AMOTQ4VCS5 1084 aa22.61■■□□□ 1.21
NECTIN1-202ENST00000340882 DICER1Q9UPY3 1922 aaKnown RBP22.61■■□□□ 1.21
NECTIN1-202ENST00000340882 SOS1Q07889 1333 aaPredicted RBP22.6■■□□□ 1.21
NECTIN1-202ENST00000340882 NFKBIEO00221 500 aa22.6■■□□□ 1.21
NECTIN1-202ENST00000340882 ZPR1O75312 459 aa22.59■■□□□ 1.21
NECTIN1-202ENST00000340882 BCL2L12Q9HB09 334 aa22.59■■□□□ 1.21
NECTIN1-202ENST00000340882 ANKRD31Q8N7Z5 1873 aa22.59■■□□□ 1.21
NECTIN1-202ENST00000340882 CARMIL3Q8ND23 1372 aa22.59■■□□□ 1.21
NECTIN1-202ENST00000340882 C1orf141Q5JVX7 400 aa22.58■■□□□ 1.21
NECTIN1-202ENST00000340882 TTLL6Q8N841 843 aa22.57■■□□□ 1.2
NECTIN1-202ENST00000340882 FER1L6Q2WGJ9 1857 aa22.56■■□□□ 1.2
NECTIN1-202ENST00000340882 SERPINB2P05120 415 aa22.56■■□□□ 1.2
NECTIN1-202ENST00000340882 CYP19A1P11511 503 aaPredicted RBP22.56■■□□□ 1.2
NECTIN1-202ENST00000340882 NARFQ9UHQ1 456 aa22.56■■□□□ 1.2
NECTIN1-202ENST00000340882 C2CD5Q86YS7 1000 aa22.55■■□□□ 1.2
NECTIN1-202ENST00000340882 COL15A1P39059 1388 aa22.54■■□□□ 1.2
NECTIN1-202ENST00000340882 SLC39A6Q13433 755 aa22.54■■□□□ 1.2
NECTIN1-202ENST00000340882 POLR3GLQ9BT43 218 aa22.54■■□□□ 1.2
NECTIN1-202ENST00000340882 LGR6Q9HBX8 967 aa22.54■■□□□ 1.2
NECTIN1-202ENST00000340882 ZBTB1Q9Y2K1 713 aa22.54■■□□□ 1.2
NECTIN1-202ENST00000340882 COL11A2P13942 1736 aaPredicted RBP22.54■■□□□ 1.2
NECTIN1-202ENST00000340882 POTEIP0CG38 1075 aa22.53■■□□□ 1.2
NECTIN1-202ENST00000340882 POTEJP0CG39 1038 aa22.53■■□□□ 1.2
NECTIN1-202ENST00000340882 SULT6B1Q6IMI4 303 aa22.53■■□□□ 1.2
NECTIN1-202ENST00000340882 MKRN1Q9UHC7 482 aaKnown RBP22.53■■□□□ 1.2
NECTIN1-202ENST00000340882 CACNA1SQ13698 1873 aa22.53■■□□□ 1.2
NECTIN1-202ENST00000340882 SLC52A2Q9HAB3 445 aa22.51■■□□□ 1.19
NECTIN1-202ENST00000340882 ZNF219Q9P2Y4 722 aaPredicted RBP22.5■■□□□ 1.19
NECTIN1-202ENST00000340882 MRC1P22897 1456 aa22.49■■□□□ 1.19
NECTIN1-202ENST00000340882 H0YIN7 160 aa22.49■■□□□ 1.19
NECTIN1-202ENST00000340882 FOXN1O15353 648 aa22.49■■□□□ 1.19
NECTIN1-202ENST00000340882 BICDL1Q6ZP65 573 aa22.49■■□□□ 1.19
NECTIN1-202ENST00000340882 UBR2Q8IWV8 1755 aa22.48■■□□□ 1.19
NECTIN1-202ENST00000340882 C21orf2O43822 256 aa22.48■■□□□ 1.19
NECTIN1-202ENST00000340882 DPY19L2Q6NUT2 758 aa22.48■■□□□ 1.19
NECTIN1-202ENST00000340882 CCDC24Q8N4L8 307 aa22.48■■□□□ 1.19
NECTIN1-202ENST00000340882 CREBZFQ9NS37 354 aa22.48■■□□□ 1.19
NECTIN1-202ENST00000340882 SLX4Q8IY92 1834 aa22.47■■□□□ 1.19
NECTIN1-202ENST00000340882 ERFEQ4G0M1 354 aa22.47■■□□□ 1.19
NECTIN1-202ENST00000340882 AKAP4Q5JQC9 854 aa22.47■■□□□ 1.19
NECTIN1-202ENST00000340882 CHADLQ6NUI6 762 aa22.47■■□□□ 1.19
NECTIN1-202ENST00000340882 RNMTO43148 476 aaKnown RBP22.46■■□□□ 1.19
NECTIN1-202ENST00000340882 IL13P35225 146 aa22.46■■□□□ 1.19
NECTIN1-202ENST00000340882 ZNF622Q969S3 477 aaKnown RBP eCLIP22.46■■□□□ 1.19
NECTIN1-202ENST00000340882 PANK3Q9H999 370 aa22.46■■□□□ 1.19
NECTIN1-202ENST00000340882 DDNO94850 711 aaPredicted RBP22.45■■□□□ 1.18
NECTIN1-202ENST00000340882 CANXP27824 592 aaKnown RBP22.45■■□□□ 1.18
NECTIN1-202ENST00000340882 TBC1D9BQ66K14 1250 aa22.44■■□□□ 1.18
NECTIN1-202ENST00000340882 SCN7AQ01118 1682 aa22.43■■□□□ 1.18
NECTIN1-202ENST00000340882 CNTNAP1P78357 1384 aa22.42■■□□□ 1.18
NECTIN1-202ENST00000340882 MORC1Q86VD1 984 aa22.42■■□□□ 1.18
NECTIN1-202ENST00000340882 ARFGEF2Q9Y6D5 1785 aa22.41■■□□□ 1.18
NECTIN1-202ENST00000340882 EIF5P55010 431 aaKnown RBP22.41■■□□□ 1.18
NECTIN1-202ENST00000340882 PRR5LQ6MZQ0 368 aa22.41■■□□□ 1.18
NECTIN1-202ENST00000340882 PASKQ96RG2 1323 aa22.4■■□□□ 1.18
NECTIN1-202ENST00000340882 SCN4AP35499 1836 aa22.39■■□□□ 1.17
NECTIN1-202ENST00000340882 VSIG10Q8N0Z9 540 aa22.39■■□□□ 1.17
NECTIN1-202ENST00000340882 BRIP1Q9BX63 1249 aa22.39■■□□□ 1.17
NECTIN1-202ENST00000340882 PRDM10Q9NQV6 1147 aa22.39■■□□□ 1.17
NECTIN1-202ENST00000340882 LTBP3Q9NS15 1303 aa22.38■■□□□ 1.17
NECTIN1-202ENST00000340882 HMOX1P09601 288 aa22.38■■□□□ 1.17
NECTIN1-202ENST00000340882 VEGFBP49765 207 aa22.38■■□□□ 1.17
NECTIN1-202ENST00000340882 TAOK3Q9H2K8 898 aa22.38■■□□□ 1.17
NECTIN1-202ENST00000340882 PDE6BP35913 854 aa22.37■■□□□ 1.17
NECTIN1-202ENST00000340882 MTHFSDQ2M296 383 aaKnown RBP22.37■■□□□ 1.17
NECTIN1-202ENST00000340882 TBC1D2BQ9UPU7 963 aa22.37■■□□□ 1.17
NECTIN1-202ENST00000340882 ITGBL1O95965 494 aaPredicted RBP22.35■■□□□ 1.17
NECTIN1-202ENST00000340882 SLC34A2O95436 690 aa22.34■■□□□ 1.17
NECTIN1-202ENST00000340882 CTCFP49711 727 aaPredicted RBP22.34■■□□□ 1.17
NECTIN1-202ENST00000340882 TAF1DQ9H5J8 278 aaPredicted RBP22.34■■□□□ 1.17
NECTIN1-202ENST00000340882 SIPA1L3O60292 1781 aaPredicted RBP22.34■■□□□ 1.17
NECTIN1-202ENST00000340882 ADAMTSL1Q8N6G6 1762 aa22.34■■□□□ 1.17
NECTIN1-202ENST00000340882 BCORQ6W2J9 1755 aa22.33■■□□□ 1.17
NECTIN1-202ENST00000340882 A0A087WZG4 1122 aa22.33■■□□□ 1.17
NECTIN1-202ENST00000340882 LBX1P52954 281 aa22.33■■□□□ 1.17
NECTIN1-202ENST00000340882 PRPF40BQ6NWY9 871 aaKnown RBP22.33■■□□□ 1.17
NECTIN1-202ENST00000340882 LDHDQ86WU2 507 aa22.33■■□□□ 1.17
NECTIN1-202ENST00000340882 WBP1LQ9NX94 342 aa22.33■■□□□ 1.17
NECTIN1-202ENST00000340882 PDZRN3Q9UPQ7 1066 aa22.33■■□□□ 1.17
NECTIN1-202ENST00000340882 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.17
NECTIN1-202ENST00000340882 STARD3NLO95772 234 aa22.32■■□□□ 1.16
NECTIN1-202ENST00000340882 SRGNP10124 158 aa22.32■■□□□ 1.16
NECTIN1-202ENST00000340882 ZNF496Q96IT1 587 aaPredicted RBP22.32■■□□□ 1.16
NECTIN1-202ENST00000340882 L3MBTL3Q96JM7 780 aaPredicted RBP22.32■■□□□ 1.16
NECTIN1-202ENST00000340882 TMEM88BA6NKF7 163 aa22.31■■□□□ 1.16
NECTIN1-202ENST00000340882 STYK1Q6J9G0 422 aa22.3■■□□□ 1.16
NECTIN1-202ENST00000340882 C7orf43Q8WVR3 580 aa22.3■■□□□ 1.16
NECTIN1-202ENST00000340882 CNKSR1Q969H4 720 aa22.3■■□□□ 1.16
NECTIN1-202ENST00000340882 AIDAQ96BJ3 306 aa22.3■■□□□ 1.16
NECTIN1-202ENST00000340882 ZNF541Q9H0D2 1346 aa22.3■■□□□ 1.16
NECTIN1-202ENST00000340882 HEG1Q9ULI3 1381 aa22.29■■□□□ 1.16
NECTIN1-202ENST00000340882 IQCA1LA6NCM1 817 aa22.29■■□□□ 1.16
NECTIN1-202ENST00000340882 CAMTA2O94983 1202 aa22.29■■□□□ 1.16
NECTIN1-202ENST00000340882 HSPA5P11021 654 aaKnown RBP22.29■■□□□ 1.16
NECTIN1-202ENST00000340882 CNBD1Q8NA66 436 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms