RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
CDK11B-201ENST00000340677 SART3Q15020 963 aaKnown RBP20.44■□□□□ 0.86
CDK11B-201ENST00000340677 SWT1Q5T5J6 900 aaKnown RBP20.44■□□□□ 0.86
CDK11B-201ENST00000340677 AATKQ6ZMQ8 1374 aa20.44■□□□□ 0.86
CDK11B-201ENST00000340677 SCP2P22307 547 aa20.44■□□□□ 0.86
CDK11B-201ENST00000340677 GGNBP2Q9H3C7 697 aa20.44■□□□□ 0.86
CDK11B-201ENST00000340677 CALRP27797 417 aaKnown RBP20.43■□□□□ 0.86
CDK11B-201ENST00000340677 CASQ1P31415 396 aa20.43■□□□□ 0.86
CDK11B-201ENST00000340677 ADAMTS8Q9UP79 889 aa20.43■□□□□ 0.86
CDK11B-201ENST00000340677 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
CDK11B-201ENST00000340677 PDE3BQ13370 1112 aa20.43■□□□□ 0.86
CDK11B-201ENST00000340677 LRRC7Q96NW7 1537 aa20.42■□□□□ 0.86
CDK11B-201ENST00000340677 ACEP12821 1306 aa20.42■□□□□ 0.86
CDK11B-201ENST00000340677 KIF3CO14782 793 aa20.42■□□□□ 0.86
CDK11B-201ENST00000340677 MTHFSP49914 203 aa20.42■□□□□ 0.86
CDK11B-201ENST00000340677 INHBEP58166 350 aa20.42■□□□□ 0.86
CDK11B-201ENST00000340677 JRKLQ9Y4A0 524 aa20.42■□□□□ 0.86
CDK11B-201ENST00000340677 TTC21AQ8NDW8 1320 aa20.41■□□□□ 0.86
CDK11B-201ENST00000340677 GSCP56915 257 aaPredicted RBP20.41■□□□□ 0.86
CDK11B-201ENST00000340677 MAP9Q49MG5 647 aa20.41■□□□□ 0.86
CDK11B-201ENST00000340677 ANKRD7Q92527 254 aa20.41■□□□□ 0.86
CDK11B-201ENST00000340677 PAIP2Q9BPZ3 127 aaKnown RBP20.41■□□□□ 0.86
CDK11B-201ENST00000340677 PNPLA6Q8IY17 1366 aa20.41■□□□□ 0.86
CDK11B-201ENST00000340677 EXOC8Q8IYI6 725 aa20.41■□□□□ 0.86
CDK11B-201ENST00000340677 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
CDK11B-201ENST00000340677 NUTM2GQ5VZR2 741 aa20.4■□□□□ 0.86
CDK11B-201ENST00000340677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.4■□□□□ 0.86
CDK11B-201ENST00000340677 STRCP1A6NGW2 1772 aa20.4■□□□□ 0.86
CDK11B-201ENST00000340677 PAX7P23759 505 aa20.4■□□□□ 0.86
CDK11B-201ENST00000340677 HDAC1Q13547 482 aaPredicted RBP20.4■□□□□ 0.86
CDK11B-201ENST00000340677 CCDC97Q96F63 343 aaPredicted RBP20.4■□□□□ 0.86
CDK11B-201ENST00000340677 TTC21BQ7Z4L5 1316 aa20.39■□□□□ 0.85
CDK11B-201ENST00000340677 OVOS2A0A0J9YW53 1432 aa20.39■□□□□ 0.85
CDK11B-201ENST00000340677 OVOS2Q6IE36 1432 aa20.39■□□□□ 0.85
CDK11B-201ENST00000340677 SOCS7O14512 581 aa20.38■□□□□ 0.85
CDK11B-201ENST00000340677 CTAGE5O15320 804 aa20.38■□□□□ 0.85
CDK11B-201ENST00000340677 RPAINQ86UA6 219 aa20.38■□□□□ 0.85
CDK11B-201ENST00000340677 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.38■□□□□ 0.855e-19■■■■■ 117.4
CDK11B-201ENST00000340677 CCDC91Q7Z6B0 441 aa20.38■□□□□ 0.85
CDK11B-201ENST00000340677 KDM4CQ9H3R0 1056 aa20.38■□□□□ 0.85
CDK11B-201ENST00000340677 IPO7O95373 1038 aaKnown RBP20.37■□□□□ 0.85
CDK11B-201ENST00000340677 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
CDK11B-201ENST00000340677 RBM25P49756 843 aaKnown RBP20.37■□□□□ 0.85
CDK11B-201ENST00000340677 DCCP43146 1447 aa20.37■□□□□ 0.85
CDK11B-201ENST00000340677 USP31Q70CQ4 1352 aa20.36■□□□□ 0.85
CDK11B-201ENST00000340677 KIF1AQ12756 1690 aa20.36■□□□□ 0.85
CDK11B-201ENST00000340677 DDX11L8A8MPP1 907 aa20.35■□□□□ 0.85
CDK11B-201ENST00000340677 H0YHG0 523 aa20.35■□□□□ 0.85
CDK11B-201ENST00000340677 PLIN1O60240 522 aa20.35■□□□□ 0.85
CDK11B-201ENST00000340677 SARNPP82979 210 aaKnown RBP20.35■□□□□ 0.85
CDK11B-201ENST00000340677 DDX46Q7L014 1031 aaKnown RBP20.35■□□□□ 0.85
CDK11B-201ENST00000340677 COG3Q96JB2 828 aa20.35■□□□□ 0.85
CDK11B-201ENST00000340677 DDX49Q9Y6V7 483 aaKnown RBP20.35■□□□□ 0.85
CDK11B-201ENST00000340677 LIG1P18858 919 aa20.34■□□□□ 0.85
CDK11B-201ENST00000340677 CDCA7LQ96GN5 454 aa20.34■□□□□ 0.85
CDK11B-201ENST00000340677 NUCKS1Q9H1E3 243 aaKnown RBP20.34■□□□□ 0.85
CDK11B-201ENST00000340677 PIK3C2AO00443 1686 aa20.34■□□□□ 0.85
CDK11B-201ENST00000340677 NRDCO43847 1150 aa20.34■□□□□ 0.85
CDK11B-201ENST00000340677 ATP2B1P20020 1258 aa20.34■□□□□ 0.85
CDK11B-201ENST00000340677 NME9Q86XW9 330 aa20.34■□□□□ 0.85
CDK11B-201ENST00000340677 FAM184AQ8NB25 1140 aa20.34■□□□□ 0.85
CDK11B-201ENST00000340677 GOLGA6CA6NDK9 693 aa20.33■□□□□ 0.85
CDK11B-201ENST00000340677 GOLGA6BA6NDN3 693 aa20.33■□□□□ 0.85
CDK11B-201ENST00000340677 GOLGA6DP0CG33 693 aa20.33■□□□□ 0.85
CDK11B-201ENST00000340677 SF3A1Q15459 793 aaKnown RBP20.33■□□□□ 0.85
CDK11B-201ENST00000340677 GOLGA6AQ9NYA3 693 aa20.33■□□□□ 0.85
CDK11B-201ENST00000340677 TPM3P06753 285 aa20.33■□□□□ 0.84
CDK11B-201ENST00000340677 C10orf67Q8IYJ2 551 aa20.33■□□□□ 0.84
CDK11B-201ENST00000340677 ATL2Q8NHH9 583 aa20.33■□□□□ 0.84
CDK11B-201ENST00000340677 DDX41Q9UJV9 622 aaKnown RBP20.33■□□□□ 0.84
CDK11B-201ENST00000340677 SETDB1Q15047 1291 aa20.32■□□□□ 0.84
CDK11B-201ENST00000340677 PDLIM2Q96JY6 352 aa20.32■□□□□ 0.84
CDK11B-201ENST00000340677 POLKQ9UBT6 870 aa20.32■□□□□ 0.84
CDK11B-201ENST00000340677 MARF1Q9Y4F3 1742 aaKnown RBP20.32■□□□□ 0.84
CDK11B-201ENST00000340677 USP19O94966 1318 aa20.32■□□□□ 0.84
CDK11B-201ENST00000340677 TRIM66O15016 1216 aa20.32■□□□□ 0.84
CDK11B-201ENST00000340677 CAND2O75155 1236 aa20.32■□□□□ 0.84
CDK11B-201ENST00000340677 MYBPC2Q14324 1141 aa20.32■□□□□ 0.84
CDK11B-201ENST00000340677 PROCA1Q8NCQ7 364 aaPredicted RBP20.32■□□□□ 0.84
CDK11B-201ENST00000340677 SMC3Q9UQE7 1217 aa20.32■□□□□ 0.84
CDK11B-201ENST00000340677 NGDNQ8NEJ9 315 aaKnown RBP20.31■□□□□ 0.84
CDK11B-201ENST00000340677 CTNNA3Q9UI47 895 aa20.31■□□□□ 0.84
CDK11B-201ENST00000340677 MORC2Q9Y6X9 1032 aaPredicted RBP20.31■□□□□ 0.84
CDK11B-201ENST00000340677 CADPS2Q86UW7 1296 aa20.31■□□□□ 0.84
CDK11B-201ENST00000340677 PROSER2Q86WR7 435 aaPredicted RBP20.31■□□□□ 0.84
CDK11B-201ENST00000340677 NFATC2IPQ8NCF5 419 aa20.31■□□□□ 0.84
CDK11B-201ENST00000340677 PAXBP1Q9Y5B6 917 aa20.31■□□□□ 0.84
CDK11B-201ENST00000340677 ATP6V1AP38606 617 aa20.3■□□□□ 0.84
CDK11B-201ENST00000340677 MKL1Q969V6 931 aa20.3■□□□□ 0.84
CDK11B-201ENST00000340677 ZNF521Q96K83 1311 aa20.3■□□□□ 0.84
CDK11B-201ENST00000340677 NUTM2FA1L443 756 aa20.29■□□□□ 0.84
CDK11B-201ENST00000340677 GOLGA6L6A8MZA4 724 aa20.29■□□□□ 0.84
CDK11B-201ENST00000340677 HSP90AB1P08238 724 aaKnown RBP20.29■□□□□ 0.84
CDK11B-201ENST00000340677 CREBRFQ8IUR6 639 aa20.29■□□□□ 0.84
CDK11B-201ENST00000340677 ZNF446Q9NWS9 450 aa20.29■□□□□ 0.84
CDK11B-201ENST00000340677 LTBP4Q8N2S1 1624 aa20.29■□□□□ 0.84
CDK11B-201ENST00000340677 RUNDC1Q96C34 613 aa20.29■□□□□ 0.84
CDK11B-201ENST00000340677 PHF8Q9UPP1 1060 aa20.29■□□□□ 0.84
CDK11B-201ENST00000340677 XIRP1Q702N8 1843 aaKnown RBP20.29■□□□□ 0.84
CDK11B-201ENST00000340677 ZBTB7CA1YPR0 619 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms