RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SHANK3Q9BYB0 1731 aa18.77■□□□□ 0.59
BRAT1-201ENST00000340611 ERBB4Q15303 1308 aa18.77■□□□□ 0.59
BRAT1-201ENST00000340611 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
BRAT1-201ENST00000340611 SLC4A10Q6U841 1118 aa18.76■□□□□ 0.59
BRAT1-201ENST00000340611 CHPF2Q9P2E5 772 aa18.76■□□□□ 0.59
BRAT1-201ENST00000340611 EP400Q96L91 3159 aa18.76■□□□□ 0.59
BRAT1-201ENST00000340611 ZNF496Q96IT1 587 aaPredicted RBP18.76■□□□□ 0.59
BRAT1-201ENST00000340611 JCADQ9P266 1359 aa18.75■□□□□ 0.59
BRAT1-201ENST00000340611 LRP6O75581 1613 aa18.75■□□□□ 0.59
BRAT1-201ENST00000340611 ESPNB1AK53 854 aa18.75■□□□□ 0.59
BRAT1-201ENST00000340611 SIPA1L3O60292 1781 aaPredicted RBP18.75■□□□□ 0.59
BRAT1-201ENST00000340611 PROSER3Q2NL68 480 aa18.75■□□□□ 0.59
BRAT1-201ENST00000340611 STK31Q9BXU1 1019 aa18.75■□□□□ 0.59
BRAT1-201ENST00000340611 CHMP4BQ9H444 224 aaKnown RBP18.74■□□□□ 0.59
BRAT1-201ENST00000340611 PTCD1O75127 700 aaKnown RBP18.74■□□□□ 0.59
BRAT1-201ENST00000340611 FAM13BQ9NYF5 915 aa18.74■□□□□ 0.59
BRAT1-201ENST00000340611 GIGYF1O75420 1035 aaPredicted RBP18.73■□□□□ 0.59
BRAT1-201ENST00000340611 CCDC30Q5VVM6 783 aa18.73■□□□□ 0.59
BRAT1-201ENST00000340611 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
BRAT1-201ENST00000340611 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
BRAT1-201ENST00000340611 FAM98CQ17RN3 349 aaKnown RBP18.73■□□□□ 0.59
BRAT1-201ENST00000340611 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
BRAT1-201ENST00000340611 FKBP5Q13451 457 aaPredicted RBP18.73■□□□□ 0.59
BRAT1-201ENST00000340611 BECN1Q14457 450 aa18.73■□□□□ 0.59
BRAT1-201ENST00000340611 KIAA1211Q6ZU35 1233 aa18.72■□□□□ 0.59
BRAT1-201ENST00000340611 SPRYD3Q8NCJ5 442 aa18.72■□□□□ 0.59
BRAT1-201ENST00000340611 RGS12O14924 1447 aa18.72■□□□□ 0.59
BRAT1-201ENST00000340611 ADAMTS7Q9UKP4 1686 aa18.72■□□□□ 0.59
BRAT1-201ENST00000340611 FLIIQ13045 1269 aa18.72■□□□□ 0.59
BRAT1-201ENST00000340611 NRAPQ86VF7 1730 aa18.71■□□□□ 0.59
BRAT1-201ENST00000340611 EXOC5O00471 708 aa18.71■□□□□ 0.59
BRAT1-201ENST00000340611 BABAM1Q9NWV8 329 aa18.71■□□□□ 0.59
BRAT1-201ENST00000340611 USP16Q9Y5T5 823 aa18.71■□□□□ 0.59
BRAT1-201ENST00000340611 MEX3CQ5U5Q3 659 aaKnown RBP18.7■□□□□ 0.58
BRAT1-201ENST00000340611 TTC5Q8N0Z6 440 aa18.7■□□□□ 0.58
BRAT1-201ENST00000340611 TPM2P07951 284 aa18.7■□□□□ 0.58
BRAT1-201ENST00000340611 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
BRAT1-201ENST00000340611 FAM182BQ5T319 152 aa18.7■□□□□ 0.58
BRAT1-201ENST00000340611 ACSBG1Q96GR2 724 aa18.7■□□□□ 0.58
BRAT1-201ENST00000340611 ABCC4O15439 1325 aa18.7■□□□□ 0.58
BRAT1-201ENST00000340611 SLIT2O94813 1529 aa18.7■□□□□ 0.58
BRAT1-201ENST00000340611 MYL6BP14649 208 aa18.7■□□□□ 0.58
BRAT1-201ENST00000340611 DISP2A7MBM2 1401 aa18.69■□□□□ 0.58
BRAT1-201ENST00000340611 UNC5CLQ8IV45 518 aa18.69■□□□□ 0.58
BRAT1-201ENST00000340611 DDX19BQ9UMR2 479 aa18.69■□□□□ 0.58
BRAT1-201ENST00000340611 SPATA31A5Q5VU36 1347 aa18.69■□□□□ 0.58
BRAT1-201ENST00000340611 SPATA31A7Q8IWB4 1347 aa18.69■□□□□ 0.58
BRAT1-201ENST00000340611 TOGARAM1Q9Y4F4 1720 aa18.69■□□□□ 0.58
BRAT1-201ENST00000340611 AIMP1Q12904 312 aaKnown RBP18.69■□□□□ 0.58
BRAT1-201ENST00000340611 ARHGAP45Q92619 1136 aa18.69■□□□□ 0.58
BRAT1-201ENST00000340611 API5Q9BZZ5 524 aaKnown RBP18.69■□□□□ 0.58
BRAT1-201ENST00000340611 ASAP1Q9ULH1 1129 aa18.69■□□□□ 0.58
BRAT1-201ENST00000340611 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
BRAT1-201ENST00000340611 C5P01031 1676 aa18.68■□□□□ 0.58
BRAT1-201ENST00000340611 TRIM44Q96DX7 344 aaPredicted RBP18.68■□□□□ 0.58
BRAT1-201ENST00000340611 USP21Q9UK80 565 aa18.68■□□□□ 0.58
BRAT1-201ENST00000340611 NAP1L2Q9ULW6 460 aaPredicted RBP18.68■□□□□ 0.58
BRAT1-201ENST00000340611 ZBTB7BO15156 539 aaPredicted RBP18.67■□□□□ 0.58
BRAT1-201ENST00000340611 DDB1Q16531 1140 aa18.67■□□□□ 0.58
BRAT1-201ENST00000340611 ZBTB40Q9NUA8 1239 aa18.67■□□□□ 0.58
BRAT1-201ENST00000340611 PIGBQ92521 554 aa18.67■□□□□ 0.58
BRAT1-201ENST00000340611 NKX1-1Q15270 411 aaPredicted RBP18.67■□□□□ 0.58
BRAT1-201ENST00000340611 TMOD3Q9NYL9 352 aa18.66■□□□□ 0.58
BRAT1-201ENST00000340611 MEIS3Q99687 375 aa18.66■□□□□ 0.58
BRAT1-201ENST00000340611 MARCH10Q8NA82 808 aaPredicted RBP18.65■□□□□ 0.58
BRAT1-201ENST00000340611 ANTXR1Q9H6X2 564 aa18.65■□□□□ 0.58
BRAT1-201ENST00000340611 HEG1Q9ULI3 1381 aa18.65■□□□□ 0.58
BRAT1-201ENST00000340611 PRIM1P49642 420 aaKnown RBP18.65■□□□□ 0.58
BRAT1-201ENST00000340611 TBC1D2Q9BYX2 928 aa18.64■□□□□ 0.58
BRAT1-201ENST00000340611 PI4KAP2A4QPH2 592 aa18.64■□□□□ 0.57
BRAT1-201ENST00000340611 ERVV-2B6SEH9 535 aa18.64■□□□□ 0.57
BRAT1-201ENST00000340611 GTF2E1P29083 439 aaPredicted RBP18.64■□□□□ 0.57
BRAT1-201ENST00000340611 PI4KAP1Q8N8J0 262 aa18.64■□□□□ 0.57
BRAT1-201ENST00000340611 MRC1P22897 1456 aa18.64■□□□□ 0.57
BRAT1-201ENST00000340611 PTPRCP08575 1304 aa18.64■□□□□ 0.57
BRAT1-201ENST00000340611 FMNL2Q96PY5 1086 aa18.63■□□□□ 0.57
BRAT1-201ENST00000340611 PDIA6Q15084 440 aa18.63■□□□□ 0.57
BRAT1-201ENST00000340611 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
BRAT1-201ENST00000340611 UPF2Q9HAU5 1272 aaKnown RBP18.63■□□□□ 0.57
BRAT1-201ENST00000340611 AFF2P51816 1311 aa18.62■□□□□ 0.57
BRAT1-201ENST00000340611 SPATA31A6Q5VVP1 1343 aa18.62■□□□□ 0.57
BRAT1-201ENST00000340611 ITGB4P16144 1822 aa18.62■□□□□ 0.57
BRAT1-201ENST00000340611 DBF4Q9UBU7 674 aaPredicted RBP18.62■□□□□ 0.57
BRAT1-201ENST00000340611 WNK3Q9BYP7 1800 aa18.62■□□□□ 0.57
BRAT1-201ENST00000340611 FSD2A1L4K1 749 aa18.61■□□□□ 0.57
BRAT1-201ENST00000340611 KCNQ2O43526 872 aa18.61■□□□□ 0.57
BRAT1-201ENST00000340611 SNRPA1P09661 255 aaKnown RBP18.61■□□□□ 0.57
BRAT1-201ENST00000340611 INTS3Q68E01 1043 aaKnown RBP18.61■□□□□ 0.57
BRAT1-201ENST00000340611 PTF1AQ7RTS3 328 aa18.61■□□□□ 0.57
BRAT1-201ENST00000340611 FNBP4Q8N3X1 1017 aaPredicted RBP18.61■□□□□ 0.57
BRAT1-201ENST00000340611 NWD2Q9ULI1 1742 aa18.61■□□□□ 0.57
BRAT1-201ENST00000340611 A1BGP04217 495 aa18.61■□□□□ 0.57
BRAT1-201ENST00000340611 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
BRAT1-201ENST00000340611 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
BRAT1-201ENST00000340611 HOXB7P09629 217 aa18.6■□□□□ 0.57
BRAT1-201ENST00000340611 TNS2Q63HR2 1409 aa18.6■□□□□ 0.57
BRAT1-201ENST00000340611 TBC1D32Q96NH3 1257 aa18.6■□□□□ 0.57
BRAT1-201ENST00000340611 ATG3Q9NT62 314 aa18.6■□□□□ 0.57
BRAT1-201ENST00000340611 SIRT2Q8IXJ6 389 aa18.6■□□□□ 0.57
BRAT1-201ENST00000340611 VPS72Q15906 364 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms