RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 G2E3Q7L622 706 aa17.06■□□□□ 0.32
GTF2F2-201ENST00000340473 ANXA1P04083 346 aa17.06■□□□□ 0.32
GTF2F2-201ENST00000340473 PROSER3Q2NL68 480 aa17.06■□□□□ 0.32
GTF2F2-201ENST00000340473 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
GTF2F2-201ENST00000340473 TRIM27P14373 513 aa17.05■□□□□ 0.32
GTF2F2-201ENST00000340473 ATF7IPQ6VMQ6 1270 aa17.05■□□□□ 0.32
GTF2F2-201ENST00000340473 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
GTF2F2-201ENST00000340473 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
GTF2F2-201ENST00000340473 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
GTF2F2-201ENST00000340473 TJP1Q07157 1748 aa17.05■□□□□ 0.32
GTF2F2-201ENST00000340473 CACNA1FO60840 1977 aa17.05■□□□□ 0.32
GTF2F2-201ENST00000340473 PDIA6Q15084 440 aa17.05■□□□□ 0.32
GTF2F2-201ENST00000340473 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
GTF2F2-201ENST00000340473 IPO8O15397 1037 aaKnown RBP17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 CLUAP1Q96AJ1 413 aa17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 LOC102724428A0A0B4J2F2 783 aa17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 TRIM37O94972 964 aa17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 RLBP1P12271 317 aa17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 PIP4K2AP48426 406 aaPredicted RBP17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 SIK1P57059 783 aa17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 PANK1Q8TE04 598 aa17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 ARHGAP45Q92619 1136 aa17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 PHAXQ9H814 394 aaKnown RBP17.04■□□□□ 0.32
GTF2F2-201ENST00000340473 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
GTF2F2-201ENST00000340473 FLIIQ13045 1269 aa17.02■□□□□ 0.32
GTF2F2-201ENST00000340473 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
GTF2F2-201ENST00000340473 ATP6V1AP38606 617 aa17.02■□□□□ 0.32
GTF2F2-201ENST00000340473 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.32
GTF2F2-201ENST00000340473 CICQ96RK0 1608 aaPredicted RBP17.02■□□□□ 0.31
GTF2F2-201ENST00000340473 PTPRCP08575 1304 aa17.02■□□□□ 0.31
GTF2F2-201ENST00000340473 A1BGP04217 495 aa17.01■□□□□ 0.31
GTF2F2-201ENST00000340473 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
GTF2F2-201ENST00000340473 NBPF26B4DH59 902 aa17.01■□□□□ 0.31
GTF2F2-201ENST00000340473 MYL6BP14649 208 aa17.01■□□□□ 0.31
GTF2F2-201ENST00000340473 ITPK1Q13572 414 aa17.01■□□□□ 0.31
GTF2F2-201ENST00000340473 NBPF14Q5TI25 921 aa17.01■□□□□ 0.31
GTF2F2-201ENST00000340473 NBPF10Q6P3W6 841 aaKnown RBP17.01■□□□□ 0.31
GTF2F2-201ENST00000340473 NBPF15Q8N660 670 aa17.01■□□□□ 0.31
GTF2F2-201ENST00000340473 CRBNQ96SW2 442 aa17.01■□□□□ 0.31
GTF2F2-201ENST00000340473 ZNF831Q5JPB2 1677 aa17■□□□□ 0.31
GTF2F2-201ENST00000340473 CYP19A1P11511 503 aaPredicted RBP17■□□□□ 0.31
GTF2F2-201ENST00000340473 LRP10Q7Z4F1 713 aa17■□□□□ 0.31
GTF2F2-201ENST00000340473 FTSJ3Q8IY81 847 aaKnown RBP17■□□□□ 0.31
GTF2F2-201ENST00000340473 API5Q9BZZ5 524 aaKnown RBP17■□□□□ 0.31
GTF2F2-201ENST00000340473 HYPKQ9NX55 129 aa17■□□□□ 0.31
GTF2F2-201ENST00000340473 LY75O60449 1722 aa17■□□□□ 0.31
GTF2F2-201ENST00000340473 ERBB4Q15303 1308 aa17■□□□□ 0.31
GTF2F2-201ENST00000340473 STARD3NLO95772 234 aa17■□□□□ 0.31
GTF2F2-201ENST00000340473 FKBP5Q13451 457 aaPredicted RBP17■□□□□ 0.31
GTF2F2-201ENST00000340473 EXOC6Q8TAG9 804 aa17■□□□□ 0.31
GTF2F2-201ENST00000340473 KCNQ4P56696 695 aa16.99■□□□□ 0.31
GTF2F2-201ENST00000340473 ABCC4O15439 1325 aa16.99■□□□□ 0.31
GTF2F2-201ENST00000340473 COG6Q9Y2V7 657 aa16.98■□□□□ 0.31
GTF2F2-201ENST00000340473 F6X3S4 739 aa16.98■□□□□ 0.31
GTF2F2-201ENST00000340473 MS4A1P11836 297 aa16.98■□□□□ 0.31
GTF2F2-201ENST00000340473 COL5A3P25940 1745 aaPredicted RBP16.98■□□□□ 0.31
GTF2F2-201ENST00000340473 TMEM57Q8N5G2 664 aa16.97■□□□□ 0.31
GTF2F2-201ENST00000340473 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
GTF2F2-201ENST00000340473 XAGE3Q8WTP9 111 aa16.97■□□□□ 0.31
GTF2F2-201ENST00000340473 COPS6Q7L5N1 327 aa16.96■□□□□ 0.31
GTF2F2-201ENST00000340473 LINC00116Q8NCU8 138 aa16.96■□□□□ 0.31
GTF2F2-201ENST00000340473 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.31
GTF2F2-201ENST00000340473 ZBTB1Q9Y2K1 713 aa16.96■□□□□ 0.3
GTF2F2-201ENST00000340473 ADCY9O60503 1353 aa16.96■□□□□ 0.3
GTF2F2-201ENST00000340473 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
GTF2F2-201ENST00000340473 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
GTF2F2-201ENST00000340473 RREB1Q92766 1687 aa16.95■□□□□ 0.3
GTF2F2-201ENST00000340473 TNS1Q9HBL0 1735 aaKnown RBP16.95■□□□□ 0.3
GTF2F2-201ENST00000340473 PI4KAP2A4QPH2 592 aa16.94■□□□□ 0.3
GTF2F2-201ENST00000340473 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
GTF2F2-201ENST00000340473 ITPRIPQ8IWB1 547 aa16.94■□□□□ 0.3
GTF2F2-201ENST00000340473 PI4KAP1Q8N8J0 262 aa16.94■□□□□ 0.3
GTF2F2-201ENST00000340473 MYH14Q7Z406 1995 aaKnown RBP16.94■□□□□ 0.3
GTF2F2-201ENST00000340473 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
GTF2F2-201ENST00000340473 SLC4A10Q6U841 1118 aa16.93■□□□□ 0.3
GTF2F2-201ENST00000340473 TAF1LQ8IZX4 1826 aa16.93■□□□□ 0.3
GTF2F2-201ENST00000340473 ERICH6BQ5W0A0 696 aa16.93■□□□□ 0.3
GTF2F2-201ENST00000340473 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
GTF2F2-201ENST00000340473 KSR2Q6VAB6 950 aa16.93■□□□□ 0.3
GTF2F2-201ENST00000340473 LRRC4BQ9NT99 713 aa16.93■□□□□ 0.3
GTF2F2-201ENST00000340473 ZNF330Q9Y3S2 320 aaPredicted RBP16.93■□□□□ 0.3
GTF2F2-201ENST00000340473 APBA3O96018 575 aa16.92■□□□□ 0.3
GTF2F2-201ENST00000340473 TTLL7Q6ZT98 887 aa16.92■□□□□ 0.3
GTF2F2-201ENST00000340473 MAP3K2Q9Y2U5 619 aa16.92■□□□□ 0.3
GTF2F2-201ENST00000340473 DDX58O95786 925 aaKnown RBP16.92■□□□□ 0.3
GTF2F2-201ENST00000340473 DNAAF4Q8WXU2 420 aa16.92■□□□□ 0.3
GTF2F2-201ENST00000340473 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
GTF2F2-201ENST00000340473 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
GTF2F2-201ENST00000340473 N4BP2Q86UW6 1770 aaPredicted RBP16.91■□□□□ 0.3
GTF2F2-201ENST00000340473 CNTNAP4Q9C0A0 1308 aa16.91■□□□□ 0.3
GTF2F2-201ENST00000340473 IL6STP40189 918 aaPredicted RBP16.9■□□□□ 0.3
GTF2F2-201ENST00000340473 PROM2Q8N271 834 aa16.9■□□□□ 0.3
GTF2F2-201ENST00000340473 DDX19BQ9UMR2 479 aa16.9■□□□□ 0.3
GTF2F2-201ENST00000340473 PLSCR1O15162 318 aa16.9■□□□□ 0.3
GTF2F2-201ENST00000340473 RIC3Q7Z5B4 369 aa16.9■□□□□ 0.3
GTF2F2-201ENST00000340473 NUP188Q5SRE5 1749 aa16.9■□□□□ 0.3
GTF2F2-201ENST00000340473 CCT4P50991 539 aaKnown RBP16.89■□□□□ 0.29
GTF2F2-201ENST00000340473 EIF5P55010 431 aaKnown RBP16.89■□□□□ 0.29
GTF2F2-201ENST00000340473 TXNRD1Q16881 649 aa16.89■□□□□ 0.29
GTF2F2-201ENST00000340473 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms