RNA–Protein interactions for RNA: ENST00000339697.4

SERINC1-201, Transcript of serine incorporator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERINC1, Length 3,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERINC1-201ENST00000339697 LGR6Q9HBX8 967 aa12.71□□□□□ -0.38
SERINC1-201ENST00000339697 GIGYF1O75420 1035 aaPredicted RBP12.7□□□□□ -0.38
SERINC1-201ENST00000339697 FLIIQ13045 1269 aa12.7□□□□□ -0.38
SERINC1-201ENST00000339697 POLA2Q14181 598 aa12.7□□□□□ -0.38
SERINC1-201ENST00000339697 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
SERINC1-201ENST00000339697 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
SERINC1-201ENST00000339697 DDRGK1Q96HY6 314 aa12.7□□□□□ -0.38
SERINC1-201ENST00000339697 AOX1Q06278 1338 aa12.7□□□□□ -0.38
SERINC1-201ENST00000339697 PDIA6Q15084 440 aa12.69□□□□□ -0.38
SERINC1-201ENST00000339697 USP42Q9H9J4 1324 aaKnown RBP12.69□□□□□ -0.38
SERINC1-201ENST00000339697 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
SERINC1-201ENST00000339697 HSP90AB1P08238 724 aaKnown RBP12.69□□□□□ -0.38
SERINC1-201ENST00000339697 G2E3Q7L622 706 aa12.69□□□□□ -0.38
SERINC1-201ENST00000339697 DCAF5Q96JK2 942 aa12.69□□□□□ -0.38
SERINC1-201ENST00000339697 TBC1D32Q96NH3 1257 aa12.69□□□□□ -0.38
SERINC1-201ENST00000339697 PDCL3Q9H2J4 239 aa12.69□□□□□ -0.38
SERINC1-201ENST00000339697 NAP1L2Q9ULW6 460 aaPredicted RBP12.69□□□□□ -0.38
SERINC1-201ENST00000339697 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
SERINC1-201ENST00000339697 ARAP2Q8WZ64 1704 aa12.68□□□□□ -0.38
SERINC1-201ENST00000339697 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
SERINC1-201ENST00000339697 C14orf37Q86TY3 774 aa12.68□□□□□ -0.38
SERINC1-201ENST00000339697 SPG7Q9UQ90 795 aa12.68□□□□□ -0.38
SERINC1-201ENST00000339697 LRP5O75197 1615 aa12.68□□□□□ -0.38
SERINC1-201ENST00000339697 SLIT2O94813 1529 aa12.68□□□□□ -0.38
SERINC1-201ENST00000339697 SPEF2Q9C093 1822 aa12.68□□□□□ -0.38
SERINC1-201ENST00000339697 CLCN1P35523 988 aa12.67□□□□□ -0.38
SERINC1-201ENST00000339697 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
SERINC1-201ENST00000339697 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
SERINC1-201ENST00000339697 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
SERINC1-201ENST00000339697 BEND3Q5T5X7 828 aa12.67□□□□□ -0.38
SERINC1-201ENST00000339697 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
SERINC1-201ENST00000339697 SEC24BO95487 1268 aa12.66□□□□□ -0.38
SERINC1-201ENST00000339697 PCDH11XQ9BZA7 1347 aa12.66□□□□□ -0.38
SERINC1-201ENST00000339697 PCDH11YQ9BZA8 1340 aa12.66□□□□□ -0.38
SERINC1-201ENST00000339697 CYP27B1O15528 508 aa12.66□□□□□ -0.38
SERINC1-201ENST00000339697 ALDH1L1O75891 902 aa12.66□□□□□ -0.38
SERINC1-201ENST00000339697 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
SERINC1-201ENST00000339697 SSH3Q8TE77 659 aa12.66□□□□□ -0.38
SERINC1-201ENST00000339697 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
SERINC1-201ENST00000339697 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
SERINC1-201ENST00000339697 GNAI3P08754 354 aa12.65□□□□□ -0.38
SERINC1-201ENST00000339697 ATP8B2P98198 1209 aa12.65□□□□□ -0.38
SERINC1-201ENST00000339697 STAP2Q9UGK3 403 aa12.65□□□□□ -0.38
SERINC1-201ENST00000339697 MYH3P11055 1940 aa12.65□□□□□ -0.38
SERINC1-201ENST00000339697 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
SERINC1-201ENST00000339697 STK31Q9BXU1 1019 aa12.65□□□□□ -0.38
SERINC1-201ENST00000339697 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.38
SERINC1-201ENST00000339697 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
SERINC1-201ENST00000339697 C1orf141Q5JVX7 400 aa12.64□□□□□ -0.39
SERINC1-201ENST00000339697 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
SERINC1-201ENST00000339697 A0A1B0GUL6 1792 aa12.64□□□□□ -0.39
SERINC1-201ENST00000339697 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
SERINC1-201ENST00000339697 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
SERINC1-201ENST00000339697 MEIS3Q99687 375 aa12.64□□□□□ -0.39
SERINC1-201ENST00000339697 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
SERINC1-201ENST00000339697 HYPKQ9NX55 129 aa12.64□□□□□ -0.39
SERINC1-201ENST00000339697 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
SERINC1-201ENST00000339697 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
SERINC1-201ENST00000339697 BCL9O00512 1426 aa12.63□□□□□ -0.39
SERINC1-201ENST00000339697 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
SERINC1-201ENST00000339697 DDX21Q9NR30 783 aaKnown RBP eCLIP12.63□□□□□ -0.39
SERINC1-201ENST00000339697 LY75O60449 1722 aa12.63□□□□□ -0.39
SERINC1-201ENST00000339697 FRAT2O75474 233 aaPredicted RBP12.62□□□□□ -0.39
SERINC1-201ENST00000339697 GNAI2P04899 355 aa12.62□□□□□ -0.39
SERINC1-201ENST00000339697 L1TD1Q5T7N2 865 aaKnown RBP12.62□□□□□ -0.39
SERINC1-201ENST00000339697 DDX17Q92841 729 aaKnown RBP12.62□□□□□ -0.39
SERINC1-201ENST00000339697 DDX60Q8IY21 1712 aaKnown RBP12.62□□□□□ -0.39
SERINC1-201ENST00000339697 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
SERINC1-201ENST00000339697 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
SERINC1-201ENST00000339697 NUP98P52948 1817 aa12.61□□□□□ -0.39
SERINC1-201ENST00000339697 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
SERINC1-201ENST00000339697 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
SERINC1-201ENST00000339697 KCNQ3O43525 872 aa12.61□□□□□ -0.39
SERINC1-201ENST00000339697 SLC4A3P48751 1232 aa12.6□□□□□ -0.39
SERINC1-201ENST00000339697 KSR2Q6VAB6 950 aa12.6□□□□□ -0.39
SERINC1-201ENST00000339697 RAPGEF4Q8WZA2 1011 aa12.6□□□□□ -0.39
SERINC1-201ENST00000339697 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
SERINC1-201ENST00000339697 TTC22Q5TAA0 569 aa12.6□□□□□ -0.39
SERINC1-201ENST00000339697 MPRIPQ6WCQ1 1025 aa12.6□□□□□ -0.39
SERINC1-201ENST00000339697 HMMRO75330 724 aa12.6□□□□□ -0.39
SERINC1-201ENST00000339697 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
SERINC1-201ENST00000339697 TEFQ10587 303 aa12.6□□□□□ -0.39
SERINC1-201ENST00000339697 RAB11FIP3O75154 756 aa12.59□□□□□ -0.39
SERINC1-201ENST00000339697 SNX21Q969T3 373 aa12.59□□□□□ -0.39
SERINC1-201ENST00000339697 CHPF2Q9P2E5 772 aa12.59□□□□□ -0.39
SERINC1-201ENST00000339697 DDIT3P35638 169 aa12.59□□□□□ -0.39
SERINC1-201ENST00000339697 DNAAF4Q8WXU2 420 aa12.59□□□□□ -0.39
SERINC1-201ENST00000339697 ZBTB7CA1YPR0 619 aa12.58□□□□□ -0.4
SERINC1-201ENST00000339697 ZC3H6P61129 1189 aaKnown RBP12.58□□□□□ -0.4
SERINC1-201ENST00000339697 TICAM2Q86XR7 235 aa12.58□□□□□ -0.4
SERINC1-201ENST00000339697 TPM2P07951 284 aa12.58□□□□□ -0.4
SERINC1-201ENST00000339697 PHAXQ9H814 394 aaKnown RBP12.58□□□□□ -0.4
SERINC1-201ENST00000339697 THRAP3Q9Y2W1 955 aaKnown RBP12.58□□□□□ -0.4
SERINC1-201ENST00000339697 LNPKQ9C0E8 428 aa12.57□□□□□ -0.4
SERINC1-201ENST00000339697 TAF1LQ8IZX4 1826 aa12.57□□□□□ -0.4
SERINC1-201ENST00000339697 KIF2CQ99661 725 aa12.57□□□□□ -0.4
SERINC1-201ENST00000339697 IL2RBP14784 551 aa12.57□□□□□ -0.4
SERINC1-201ENST00000339697 LINS1Q8NG48 757 aa12.57□□□□□ -0.4
SERINC1-201ENST00000339697 CASP7P55210 303 aa12.56□□□□□ -0.4
SERINC1-201ENST00000339697 RABL6Q3YEC7 729 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms