RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ADCY9O60503 1353 aa10.87□□□□□ -0.67
SNCA-201ENST00000336904 KIF24Q5T7B8 1368 aa10.87□□□□□ -0.67
SNCA-201ENST00000336904 BEND3Q5T5X7 828 aa10.87□□□□□ -0.67
SNCA-201ENST00000336904 RAPGEF4Q8WZA2 1011 aa10.87□□□□□ -0.67
SNCA-201ENST00000336904 C19orf44Q9H6X5 657 aa10.87□□□□□ -0.67
SNCA-201ENST00000336904 ERBB3P21860 1342 aa10.87□□□□□ -0.67
SNCA-201ENST00000336904 GIGYF1O75420 1035 aaPredicted RBP10.87□□□□□ -0.67
SNCA-201ENST00000336904 CASC1Q6TDU7 716 aa10.86□□□□□ -0.67
SNCA-201ENST00000336904 C1orf167Q5SNV9 1468 aa10.86□□□□□ -0.67
SNCA-201ENST00000336904 LRRC37A3O60309 1634 aa10.86□□□□□ -0.67
SNCA-201ENST00000336904 ERC2O15083 957 aa10.86□□□□□ -0.67
SNCA-201ENST00000336904 NEK4P51957 841 aa10.86□□□□□ -0.67
SNCA-201ENST00000336904 IBTKQ9P2D0 1353 aaPredicted RBP10.86□□□□□ -0.67
SNCA-201ENST00000336904 NDUFB9Q9Y6M9 179 aa10.85□□□□□ -0.67
SNCA-201ENST00000336904 ATP5J2-PTCD1G3V325 749 aa10.85□□□□□ -0.67
SNCA-201ENST00000336904 PTCD1O75127 700 aaKnown RBP10.85□□□□□ -0.67
SNCA-201ENST00000336904 CPA1P15085 419 aa10.85□□□□□ -0.67
SNCA-201ENST00000336904 RHPN1Q8TCX5 695 aa10.85□□□□□ -0.67
SNCA-201ENST00000336904 SNX21Q969T3 373 aa10.85□□□□□ -0.67
SNCA-201ENST00000336904 SPG7Q9UQ90 795 aa10.85□□□□□ -0.67
SNCA-201ENST00000336904 ZNF330Q9Y3S2 320 aaPredicted RBP10.85□□□□□ -0.67
SNCA-201ENST00000336904 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
SNCA-201ENST00000336904 ZNF496Q96IT1 587 aaPredicted RBP10.84□□□□□ -0.67
SNCA-201ENST00000336904 ADAMTSL3P82987 1691 aa10.84□□□□□ -0.67
SNCA-201ENST00000336904 NCLP19338 710 aaKnown RBP10.84□□□□□ -0.67
SNCA-201ENST00000336904 CWC27Q6UX04 472 aaKnown RBP10.84□□□□□ -0.67
SNCA-201ENST00000336904 STRN4Q9NRL3 753 aa10.84□□□□□ -0.67
SNCA-201ENST00000336904 DBF4Q9UBU7 674 aaPredicted RBP10.84□□□□□ -0.67
SNCA-201ENST00000336904 CHMLP26374 656 aa10.84□□□□□ -0.67
SNCA-201ENST00000336904 DDIT3P35638 169 aa10.84□□□□□ -0.67
SNCA-201ENST00000336904 ESYT1Q9BSJ8 1104 aa10.84□□□□□ -0.67
SNCA-201ENST00000336904 SALL3Q9BXA9 1300 aa10.83□□□□□ -0.68
SNCA-201ENST00000336904 RIC3Q7Z5B4 369 aa10.83□□□□□ -0.68
SNCA-201ENST00000336904 SUCLG2Q96I99 432 aa10.83□□□□□ -0.68
SNCA-201ENST00000336904 CCDC8Q9H0W5 538 aaPredicted RBP10.83□□□□□ -0.68
SNCA-201ENST00000336904 AMOTQ4VCS5 1084 aa10.83□□□□□ -0.68
SNCA-201ENST00000336904 MCTP1Q6DN14 999 aa10.83□□□□□ -0.68
SNCA-201ENST00000336904 SSH3Q8TE77 659 aa10.83□□□□□ -0.68
SNCA-201ENST00000336904 XAGE3Q8WTP9 111 aa10.83□□□□□ -0.68
SNCA-201ENST00000336904 TLR7Q9NYK1 1049 aaKnown RBP10.83□□□□□ -0.68
SNCA-201ENST00000336904 MEGF6O75095 1541 aa10.83□□□□□ -0.68
SNCA-201ENST00000336904 CYP27B1O15528 508 aa10.82□□□□□ -0.68
SNCA-201ENST00000336904 CHGBP05060 677 aa10.82□□□□□ -0.68
SNCA-201ENST00000336904 RABEP1Q15276 862 aa10.82□□□□□ -0.68
SNCA-201ENST00000336904 ZNF790Q6PG37 636 aa10.82□□□□□ -0.68
SNCA-201ENST00000336904 COPS6Q7L5N1 327 aa10.82□□□□□ -0.68
SNCA-201ENST00000336904 MYD88Q99836 296 aa10.82□□□□□ -0.68
SNCA-201ENST00000336904 BICC1Q9H694 974 aaKnown RBP10.82□□□□□ -0.68
SNCA-201ENST00000336904 REC8O95072 547 aa10.82□□□□□ -0.68
SNCA-201ENST00000336904 EDC3Q96F86 508 aaKnown RBP10.82□□□□□ -0.68
SNCA-201ENST00000336904 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
SNCA-201ENST00000336904 TATP17735 454 aaPredicted RBP10.82□□□□□ -0.68
SNCA-201ENST00000336904 RAB3GAP1Q15042 981 aa10.82□□□□□ -0.68
SNCA-201ENST00000336904 EPHA10Q5JZY3 1008 aa10.82□□□□□ -0.68
SNCA-201ENST00000336904 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
SNCA-201ENST00000336904 ZNF142P52746 1687 aaPredicted RBP10.81□□□□□ -0.68
SNCA-201ENST00000336904 NCOA3Q9Y6Q9 1424 aa10.81□□□□□ -0.68
SNCA-201ENST00000336904 PHKG2P15735 406 aa10.81□□□□□ -0.68
SNCA-201ENST00000336904 KDM6AO15550 1401 aaPredicted RBP10.81□□□□□ -0.68
SNCA-201ENST00000336904 IGKV5-2P06315 115 aa10.81□□□□□ -0.68
SNCA-201ENST00000336904 COL9A3Q14050 684 aaPredicted RBP10.81□□□□□ -0.68
SNCA-201ENST00000336904 PDIA6Q15084 440 aa10.81□□□□□ -0.68
SNCA-201ENST00000336904 AACSQ86V21 672 aa10.81□□□□□ -0.68
SNCA-201ENST00000336904 KAZALD1Q96I82 304 aa10.81□□□□□ -0.68
SNCA-201ENST00000336904 KAT6BQ8WYB5 2073 aa10.8□□□□□ -0.68
SNCA-201ENST00000336904 PI4K2BQ8TCG2 481 aa10.8□□□□□ -0.68
SNCA-201ENST00000336904 CHMP3Q9Y3E7 222 aa10.8□□□□□ -0.68
SNCA-201ENST00000336904 A0A0G2JS52 829 aa10.8□□□□□ -0.68
SNCA-201ENST00000336904 XRCC6P12956 609 aaKnown RBP eCLIP10.8□□□□□ -0.68
SNCA-201ENST00000336904 KSR2Q6VAB6 950 aa10.8□□□□□ -0.68
SNCA-201ENST00000336904 SLC52A2Q9HAB3 445 aa10.8□□□□□ -0.68
SNCA-201ENST00000336904 ST18O60284 1047 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 POLA2Q14181 598 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 TOM1L2Q6ZVM7 507 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 GAS2L3Q86XJ1 694 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 TTC5Q8N0Z6 440 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 CCDC85AQ96PX6 553 aaPredicted RBP10.79□□□□□ -0.68
SNCA-201ENST00000336904 OSBPL3Q9H4L5 887 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 PRDM11Q9NQV5 511 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 MST1RQ04912 1400 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 ZNF335Q9H4Z2 1342 aaPredicted RBP10.79□□□□□ -0.68
SNCA-201ENST00000336904 STRCP1A6NGW2 1772 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.79□□□□□ -0.68
SNCA-201ENST00000336904 GOLGA6L3A6NEY3 463 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 UBE3BQ7Z3V4 1068 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 KIF1BPQ96EK5 621 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 TMX3Q96JJ7 454 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 TCEANC2Q96MN5 208 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 BOLA2Q9H3K6 86 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 GDPD2Q9HCC8 539 aa10.79□□□□□ -0.68
SNCA-201ENST00000336904 GRM8O00222 908 aa10.78□□□□□ -0.68
SNCA-201ENST00000336904 BAG4O95429 457 aaKnown RBP10.78□□□□□ -0.68
SNCA-201ENST00000336904 CABP4P57796 275 aa10.78□□□□□ -0.68
SNCA-201ENST00000336904 RASEFQ8IZ41 740 aa10.78□□□□□ -0.68
SNCA-201ENST00000336904 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
SNCA-201ENST00000336904 KDM3BQ7LBC6 1761 aa10.78□□□□□ -0.68
SNCA-201ENST00000336904 IFIT2P09913 472 aaKnown RBP10.78□□□□□ -0.68
SNCA-201ENST00000336904 GBP4Q96PP9 640 aa10.78□□□□□ -0.68
SNCA-201ENST00000336904 SLFNL1Q499Z3 407 aa10.77□□□□□ -0.68
SNCA-201ENST00000336904 BRINP3Q76B58 766 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms