RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 WNK3Q9BYP7 1800 aa21.03■□□□□ 0.96
PDCD1-201ENST00000334409 TRAK2O60296 914 aa21.03■□□□□ 0.96
PDCD1-201ENST00000334409 PLEKHG2Q9H7P9 1386 aa21.03■□□□□ 0.96
PDCD1-201ENST00000334409 MVPQ14764 893 aaKnown RBP21.02■□□□□ 0.96
PDCD1-201ENST00000334409 GJD4Q96KN9 370 aaPredicted RBP21.02■□□□□ 0.96
PDCD1-201ENST00000334409 TBC1D32Q96NH3 1257 aa21.02■□□□□ 0.96
PDCD1-201ENST00000334409 QTRT2Q9H974 415 aaKnown RBP21.02■□□□□ 0.96
PDCD1-201ENST00000334409 NKX1-1Q15270 411 aaPredicted RBP21.02■□□□□ 0.96
PDCD1-201ENST00000334409 CDCA7Q9BWT1 371 aaPredicted RBP21.02■□□□□ 0.96
PDCD1-201ENST00000334409 ADAMTS7Q9UKP4 1686 aa21.01■□□□□ 0.95
PDCD1-201ENST00000334409 ZKSCAN2Q63HK3 967 aa21.01■□□□□ 0.95
PDCD1-201ENST00000334409 TNNQ9UQP3 1299 aa21.01■□□□□ 0.95
PDCD1-201ENST00000334409 EIF4A1P60842 406 aaKnown RBP21.01■□□□□ 0.95
PDCD1-201ENST00000334409 MARCH10Q8NA82 808 aaPredicted RBP21.01■□□□□ 0.95
PDCD1-201ENST00000334409 PDZRN3Q9UPQ7 1066 aa21.01■□□□□ 0.95
PDCD1-201ENST00000334409 SEC24BO95487 1268 aa21■□□□□ 0.95
PDCD1-201ENST00000334409 TBC1D2Q9BYX2 928 aa21■□□□□ 0.95
PDCD1-201ENST00000334409 TRPC5Q9UL62 973 aaPredicted RBP21■□□□□ 0.95
PDCD1-201ENST00000334409 TNS2Q63HR2 1409 aa21■□□□□ 0.95
PDCD1-201ENST00000334409 PTMSP20962 102 aa20.99■□□□□ 0.95
PDCD1-201ENST00000334409 SYTL4Q96C24 671 aaPredicted RBP20.99■□□□□ 0.95
PDCD1-201ENST00000334409 SIPA1L3O60292 1781 aaPredicted RBP20.99■□□□□ 0.95
PDCD1-201ENST00000334409 PRAMEF22A3QJZ6 481 aa20.99■□□□□ 0.95
PDCD1-201ENST00000334409 BABAM1Q9NWV8 329 aa20.99■□□□□ 0.95
PDCD1-201ENST00000334409 FAM182BQ5T319 152 aa20.98■□□□□ 0.95
PDCD1-201ENST00000334409 ZNF790Q6PG37 636 aa20.98■□□□□ 0.95
PDCD1-201ENST00000334409 DZIP1LQ8IYY4 767 aaKnown RBP20.98■□□□□ 0.95
PDCD1-201ENST00000334409 ACSBG1Q96GR2 724 aa20.98■□□□□ 0.95
PDCD1-201ENST00000334409 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.98■□□□□ 0.95
PDCD1-201ENST00000334409 ERVV-2B6SEH9 535 aa20.97■□□□□ 0.95
PDCD1-201ENST00000334409 EIF2S2P20042 333 aaKnown RBP20.97■□□□□ 0.95
PDCD1-201ENST00000334409 PRDM4Q9UKN5 801 aa20.97■□□□□ 0.95
PDCD1-201ENST00000334409 NOB1Q9ULX3 412 aaKnown RBP20.97■□□□□ 0.95
PDCD1-201ENST00000334409 GLI3P10071 1580 aa20.97■□□□□ 0.95
PDCD1-201ENST00000334409 KDM3BQ7LBC6 1761 aa20.97■□□□□ 0.95
PDCD1-201ENST00000334409 TOGARAM1Q9Y4F4 1720 aa20.96■□□□□ 0.95
PDCD1-201ENST00000334409 ATRNO75882 1429 aa20.96■□□□□ 0.95
PDCD1-201ENST00000334409 ERBB4Q15303 1308 aa20.96■□□□□ 0.95
PDCD1-201ENST00000334409 FTSJ3Q8IY81 847 aaKnown RBP20.95■□□□□ 0.94
PDCD1-201ENST00000334409 MRPL50Q8N5N7 158 aaKnown RBP20.95■□□□□ 0.94
PDCD1-201ENST00000334409 PIGBQ92521 554 aa20.95■□□□□ 0.94
PDCD1-201ENST00000334409 TMOD3Q9NYL9 352 aa20.95■□□□□ 0.94
PDCD1-201ENST00000334409 PRIM1P49642 420 aaKnown RBP20.95■□□□□ 0.94
PDCD1-201ENST00000334409 MTERF4Q7Z6M4 381 aaKnown RBP20.95■□□□□ 0.94
PDCD1-201ENST00000334409 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
PDCD1-201ENST00000334409 ZNF496Q96IT1 587 aaPredicted RBP20.95■□□□□ 0.94
PDCD1-201ENST00000334409 ALDH1L2Q3SY69 923 aa20.94■□□□□ 0.94
PDCD1-201ENST00000334409 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.94■□□□□ 0.94
PDCD1-201ENST00000334409 MRC1P22897 1456 aa20.94■□□□□ 0.94
PDCD1-201ENST00000334409 ARXQ96QS3 562 aa20.93■□□□□ 0.94
PDCD1-201ENST00000334409 GZF1Q9H116 711 aaPredicted RBP20.93■□□□□ 0.94
PDCD1-201ENST00000334409 PTCD1O75127 700 aaKnown RBP20.93■□□□□ 0.94
PDCD1-201ENST00000334409 SLC4A2P04920 1241 aa20.92■□□□□ 0.94
PDCD1-201ENST00000334409 HDAC1Q13547 482 aaPredicted RBP20.92■□□□□ 0.94
PDCD1-201ENST00000334409 KIAA1211Q6ZU35 1233 aa20.92■□□□□ 0.94
PDCD1-201ENST00000334409 SEPT12Q8IYM1 358 aa20.92■□□□□ 0.94
PDCD1-201ENST00000334409 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
PDCD1-201ENST00000334409 GIGYF1O75420 1035 aaPredicted RBP20.92■□□□□ 0.94
PDCD1-201ENST00000334409 CCDC173Q0VFZ6 552 aa20.92■□□□□ 0.94
PDCD1-201ENST00000334409 SKOR2Q2VWA4 1001 aaPredicted RBP20.92■□□□□ 0.94
PDCD1-201ENST00000334409 DDX19BQ9UMR2 479 aa20.92■□□□□ 0.94
PDCD1-201ENST00000334409 OFD1O75665 1012 aa20.91■□□□□ 0.94
PDCD1-201ENST00000334409 HDGFL1Q5TGJ6 251 aa20.91■□□□□ 0.94
PDCD1-201ENST00000334409 ZNF428Q96B54 188 aa20.91■□□□□ 0.94
PDCD1-201ENST00000334409 TRIM27P14373 513 aa20.9■□□□□ 0.94
PDCD1-201ENST00000334409 KCNQ2O43526 872 aa20.9■□□□□ 0.94
PDCD1-201ENST00000334409 ANXA1P04083 346 aa20.9■□□□□ 0.94
PDCD1-201ENST00000334409 ATF7IPQ6VMQ6 1270 aa20.9■□□□□ 0.94
PDCD1-201ENST00000334409 G2E3Q7L622 706 aa20.9■□□□□ 0.94
PDCD1-201ENST00000334409 ITGB4P16144 1822 aa20.9■□□□□ 0.94
PDCD1-201ENST00000334409 SMAP1Q8IYB5 467 aaPredicted RBP20.89■□□□□ 0.94
PDCD1-201ENST00000334409 CCDC30Q5VVM6 783 aa20.89■□□□□ 0.93
PDCD1-201ENST00000334409 ZSCAN30Q86W11 494 aa20.88■□□□□ 0.93
PDCD1-201ENST00000334409 DOT1LQ8TEK3 1739 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 RBM10P98175 930 aaKnown RBP20.87■□□□□ 0.93
PDCD1-201ENST00000334409 PTF1AQ7RTS3 328 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 FMNL2Q96PY5 1086 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 PPP1R9BQ96SB3 815 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 STK31Q9BXU1 1019 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 ATG3Q9NT62 314 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 USP16Q9Y5T5 823 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 HEG1Q9ULI3 1381 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 PIP4K2AP48426 406 aaPredicted RBP20.87■□□□□ 0.93
PDCD1-201ENST00000334409 ZNF772Q68DY9 489 aaPredicted RBP20.87■□□□□ 0.93
PDCD1-201ENST00000334409 CHPF2Q9P2E5 772 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 THSD7AQ9UPZ6 1657 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 KIF16BQ96L93 1317 aa20.87■□□□□ 0.93
PDCD1-201ENST00000334409 ONECUT3O60422 494 aaPredicted RBP20.86■□□□□ 0.93
PDCD1-201ENST00000334409 RBM42Q9BTD8 480 aaKnown RBP20.86■□□□□ 0.93
PDCD1-201ENST00000334409 BCL9O00512 1426 aa20.85■□□□□ 0.93
PDCD1-201ENST00000334409 PHAXQ9H814 394 aaKnown RBP20.85■□□□□ 0.93
PDCD1-201ENST00000334409 CIZ1Q9ULV3 898 aaPredicted RBP20.85■□□□□ 0.93
PDCD1-201ENST00000334409 IPO8O15397 1037 aaKnown RBP20.84■□□□□ 0.93
PDCD1-201ENST00000334409 PROSER3Q2NL68 480 aa20.84■□□□□ 0.93
PDCD1-201ENST00000334409 SMC5Q8IY18 1101 aa20.84■□□□□ 0.93
PDCD1-201ENST00000334409 RGS17Q9UGC6 210 aaPredicted RBP20.84■□□□□ 0.93
PDCD1-201ENST00000334409 SNRPA1P09661 255 aaKnown RBP20.84■□□□□ 0.93
PDCD1-201ENST00000334409 BRPF1P55201 1214 aaPredicted RBP20.84■□□□□ 0.93
PDCD1-201ENST00000334409 HS1BP3Q53T59 392 aa20.84■□□□□ 0.93
PDCD1-201ENST00000334409 ITPRIPQ8IWB1 547 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms