RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 MXRA7P84157 204 aa14.66□□□□□ -0.06
KPNA4-201ENST00000334256 TSTA3Q13630 321 aaPredicted RBP14.66□□□□□ -0.06
KPNA4-201ENST00000334256 TCIRG1Q13488 830 aa14.66□□□□□ -0.06
KPNA4-201ENST00000334256 RASA3Q14644 834 aa14.66□□□□□ -0.06
KPNA4-201ENST00000334256 PPP2R5DQ14738 602 aa14.66□□□□□ -0.06
KPNA4-201ENST00000334256 ACBD5Q5T8D3 534 aaPredicted RBP14.65□□□□□ -0.06
KPNA4-201ENST00000334256 ANKRD18BA2A2Z9 1011 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 HMGB2P26583 209 aaKnown RBP14.65□□□□□ -0.06
KPNA4-201ENST00000334256 TAF4BQ92750 862 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 PRDM2Q13029 1718 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 ME1P48163 572 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 GSDMBQ8TAX9 411 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 NBPF3Q9H094 633 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 PDE1CQ14123 709 aaPredicted RBP14.65□□□□□ -0.06
KPNA4-201ENST00000334256 ZKSCAN2Q63HK3 967 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 SMC1BQ8NDV3 1235 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 TRIM6Q9C030 488 aaPredicted RBP14.65□□□□□ -0.06
KPNA4-201ENST00000334256 PARD3BQ8TEW8 1205 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 TSPY26PQ9H489 355 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 TPD52P55327 224 aaPredicted RBP14.65□□□□□ -0.06
KPNA4-201ENST00000334256 ATF7IPQ6VMQ6 1270 aa14.65□□□□□ -0.06
KPNA4-201ENST00000334256 HARSP12081 509 aaKnown RBP14.65□□□□□ -0.07
KPNA4-201ENST00000334256 NLRP13Q86W25 1043 aa14.64□□□□□ -0.07
KPNA4-201ENST00000334256 ZHX1Q9UKY1 873 aaPredicted RBP14.64□□□□□ -0.07
KPNA4-201ENST00000334256 CGNQ9P2M7 1197 aaKnown RBP14.64□□□□□ -0.07
KPNA4-201ENST00000334256 ANKFY1Q9P2R3 1169 aa14.64□□□□□ -0.07
KPNA4-201ENST00000334256 CCDC63Q8NA47 563 aa14.64□□□□□ -0.07
KPNA4-201ENST00000334256 ARID4AP29374 1257 aaPredicted RBP14.64□□□□□ -0.07
KPNA4-201ENST00000334256 CCDC129Q6ZRS4 1044 aa14.64□□□□□ -0.07
KPNA4-201ENST00000334256 CCDC144CPQ8IYA2 1237 aa14.64□□□□□ -0.07
KPNA4-201ENST00000334256 IVNS1ABPQ9Y6Y0 642 aa14.64□□□□□ -0.07
KPNA4-201ENST00000334256 MICAL1Q8TDZ2 1067 aa14.64□□□□□ -0.07
KPNA4-201ENST00000334256 CCDC174Q6PII3 467 aa14.63□□□□□ -0.07
KPNA4-201ENST00000334256 WRNQ14191 1432 aaPredicted RBP eCLIP14.63□□□□□ -0.075e-6■■■■■ 29.2
KPNA4-201ENST00000334256 HLA-DOAP06340 250 aa14.63□□□□□ -0.07
KPNA4-201ENST00000334256 C1orf115Q9H7X2 142 aa14.63□□□□□ -0.07
KPNA4-201ENST00000334256 CEP126Q9P2H0 1117 aa14.63□□□□□ -0.07
KPNA4-201ENST00000334256 ZSCAN25Q6NSZ9 544 aa14.63□□□□□ -0.07
KPNA4-201ENST00000334256 GTPBP4Q9BZE4 634 aaKnown RBP14.63□□□□□ -0.07
KPNA4-201ENST00000334256 CACYBPQ9HB71 228 aaKnown RBP14.63□□□□□ -0.07
KPNA4-201ENST00000334256 FILIP1Q7Z7B0 1213 aa14.63□□□□□ -0.07
KPNA4-201ENST00000334256 RBM46Q8TBY0 533 aaKnown RBP14.63□□□□□ -0.07
KPNA4-201ENST00000334256 TTLL3Q9Y4R7 772 aa14.63□□□□□ -0.07
KPNA4-201ENST00000334256 TRMT112Q9UI30 125 aaKnown RBP14.62□□□□□ -0.07
KPNA4-201ENST00000334256 GOLGA6CA6NDK9 693 aa14.62□□□□□ -0.07
KPNA4-201ENST00000334256 GOLGA6BA6NDN3 693 aa14.62□□□□□ -0.07
KPNA4-201ENST00000334256 GOLGA6DP0CG33 693 aa14.62□□□□□ -0.07
KPNA4-201ENST00000334256 THEMISQ8N1K5 641 aaPredicted RBP14.62□□□□□ -0.07
KPNA4-201ENST00000334256 GOLGA6AQ9NYA3 693 aa14.62□□□□□ -0.07
KPNA4-201ENST00000334256 SHTN1A0MZ66 631 aa14.62□□□□□ -0.07
KPNA4-201ENST00000334256 PPARDQ03181 441 aa14.62□□□□□ -0.07
KPNA4-201ENST00000334256 LRRC43Q8N309 656 aa14.62□□□□□ -0.07
KPNA4-201ENST00000334256 GANCQ8TET4 914 aa14.62□□□□□ -0.07
KPNA4-201ENST00000334256 WHAMMQ8TF30 809 aa14.62□□□□□ -0.07
KPNA4-201ENST00000334256 IFRD2Q12894 506 aaPredicted RBP14.62□□□□□ -0.07
KPNA4-201ENST00000334256 HDGFL1Q5TGJ6 251 aa14.61□□□□□ -0.07
KPNA4-201ENST00000334256 RPUSD2Q8IZ73 545 aaKnown RBP14.61□□□□□ -0.07
KPNA4-201ENST00000334256 WDR48Q8TAF3 677 aa14.61□□□□□ -0.07
KPNA4-201ENST00000334256 ACTN2P35609 894 aa14.61□□□□□ -0.07
KPNA4-201ENST00000334256 IRX5P78411 483 aaPredicted RBP14.61□□□□□ -0.07
KPNA4-201ENST00000334256 SLF2Q8IX21 1173 aa14.61□□□□□ -0.07
KPNA4-201ENST00000334256 STX6O43752 255 aa14.61□□□□□ -0.07
KPNA4-201ENST00000334256 CHMP6Q96FZ7 201 aa14.61□□□□□ -0.07
KPNA4-201ENST00000334256 PKD2L1Q9P0L9 805 aa14.61□□□□□ -0.07
KPNA4-201ENST00000334256 BAG4O95429 457 aaKnown RBP14.61□□□□□ -0.07
KPNA4-201ENST00000334256 TSG101Q99816 390 aa14.61□□□□□ -0.07
KPNA4-201ENST00000334256 GTF2F1P35269 517 aaKnown RBP eCLIP14.6□□□□□ -0.078e-10■■■■■ 30.9
KPNA4-201ENST00000334256 FAM160A1Q05DH4 1040 aa14.6□□□□□ -0.07
KPNA4-201ENST00000334256 FNBP4Q8N3X1 1017 aaPredicted RBP14.6□□□□□ -0.07
KPNA4-201ENST00000334256 CCP110O43303 1012 aa14.6□□□□□ -0.07
KPNA4-201ENST00000334256 CAMK4Q16566 473 aa14.6□□□□□ -0.07
KPNA4-201ENST00000334256 INTS3Q68E01 1043 aaKnown RBP14.6□□□□□ -0.07
KPNA4-201ENST00000334256 CRCPO75575 148 aa14.6□□□□□ -0.07
KPNA4-201ENST00000334256 CEP135Q66GS9 1140 aa14.6□□□□□ -0.07
KPNA4-201ENST00000334256 ATP6V1E1P36543 226 aa14.6□□□□□ -0.07
KPNA4-201ENST00000334256 ZYXQ15942 572 aaKnown RBP14.6□□□□□ -0.07
KPNA4-201ENST00000334256 TMCO5AQ8N6Q1 288 aa14.6□□□□□ -0.07
KPNA4-201ENST00000334256 ZNF397Q8NF99 534 aaPredicted RBP14.6□□□□□ -0.07
KPNA4-201ENST00000334256 MKRN3Q13064 507 aaKnown RBP14.6□□□□□ -0.07
KPNA4-201ENST00000334256 JAG2Q9Y219 1238 aa14.6□□□□□ -0.07
KPNA4-201ENST00000334256 TMEM110-MUSTN1A8MSY1 372 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 SPECC1Q5M775 1068 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 CCDC65Q8IXS2 484 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 PICK1Q9NRD5 415 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.59□□□□□ -0.07
KPNA4-201ENST00000334256 NBPF6Q5VWK0 638 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 NBPF5PQ86XG9 351 aaPredicted RBP14.59□□□□□ -0.07
KPNA4-201ENST00000334256 NBPF4Q96M43 638 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 AFG3L2Q9Y4W6 797 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 SRGAP3O43295 1099 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 SMCR8Q8TEV9 937 aaPredicted RBP14.59□□□□□ -0.07
KPNA4-201ENST00000334256 CRACR2AQ9BSW2 395 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 ERLIN1O75477 346 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 CCT6BQ92526 530 aa14.59□□□□□ -0.07
KPNA4-201ENST00000334256 IFIT1P09914 478 aaKnown RBP14.58□□□□□ -0.07
KPNA4-201ENST00000334256 DACT3Q96B18 629 aaPredicted RBP14.58□□□□□ -0.08
KPNA4-201ENST00000334256 SEPT10Q9P0V9 454 aa14.58□□□□□ -0.08
KPNA4-201ENST00000334256 DIXDC1Q155Q3 683 aa14.58□□□□□ -0.08
KPNA4-201ENST00000334256 SEPT14Q6ZU15 432 aa14.58□□□□□ -0.08
KPNA4-201ENST00000334256 CHST3Q7LGC8 479 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms