RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CIZ1Q9ULV3 898 aaPredicted RBP18.25■□□□□ 0.51
CLCNKA-201ENST00000331433 TRIM6-TRIM34B2RNG4 842 aa18.25■□□□□ 0.51
CLCNKA-201ENST00000331433 RILPL2Q969X0 211 aa18.25■□□□□ 0.51
CLCNKA-201ENST00000331433 STRCP1A6NGW2 1772 aa18.24■□□□□ 0.51
CLCNKA-201ENST00000331433 NUTM1Q86Y26 1132 aa18.24■□□□□ 0.51
CLCNKA-201ENST00000331433 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
CLCNKA-201ENST00000331433 UNC5CLQ8IV45 518 aa18.24■□□□□ 0.51
CLCNKA-201ENST00000331433 STAP2Q9UGK3 403 aa18.24■□□□□ 0.51
CLCNKA-201ENST00000331433 MAP3K2Q9Y2U5 619 aa18.24■□□□□ 0.51
CLCNKA-201ENST00000331433 RAB3GAP1Q15042 981 aa18.23■□□□□ 0.51
CLCNKA-201ENST00000331433 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
CLCNKA-201ENST00000331433 GZF1Q9H116 711 aaPredicted RBP18.23■□□□□ 0.51
CLCNKA-201ENST00000331433 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
CLCNKA-201ENST00000331433 TRAK2O60296 914 aa18.22■□□□□ 0.51
CLCNKA-201ENST00000331433 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
CLCNKA-201ENST00000331433 RHPN1Q8TCX5 695 aa18.22■□□□□ 0.51
CLCNKA-201ENST00000331433 ESYT1Q9BSJ8 1104 aa18.22■□□□□ 0.51
CLCNKA-201ENST00000331433 CHRNA2Q15822 529 aa18.21■□□□□ 0.51
CLCNKA-201ENST00000331433 RAB11FIP3O75154 756 aa18.21■□□□□ 0.5
CLCNKA-201ENST00000331433 CHMLP26374 656 aa18.21■□□□□ 0.5
CLCNKA-201ENST00000331433 CWF19L2Q2TBE0 894 aaKnown RBP18.21■□□□□ 0.5
CLCNKA-201ENST00000331433 DDX11L8A8MPP1 907 aa18.2■□□□□ 0.5
CLCNKA-201ENST00000331433 CSB-PGBD3P0DP91 1061 aa18.2■□□□□ 0.5
CLCNKA-201ENST00000331433 KSR2Q6VAB6 950 aa18.2■□□□□ 0.5
CLCNKA-201ENST00000331433 NPHP3Q7Z494 1330 aa18.2■□□□□ 0.5
CLCNKA-201ENST00000331433 MEGF6O75095 1541 aa18.19■□□□□ 0.5
CLCNKA-201ENST00000331433 KDM6AO15550 1401 aaPredicted RBP18.19■□□□□ 0.5
CLCNKA-201ENST00000331433 ADAMTS7Q9UKP4 1686 aa18.19■□□□□ 0.5
CLCNKA-201ENST00000331433 AIMP1Q12904 312 aaKnown RBP18.19■□□□□ 0.5
CLCNKA-201ENST00000331433 C9orf78Q9NZ63 289 aaPredicted RBP18.19■□□□□ 0.5
CLCNKA-201ENST00000331433 MAP4K4O95819 1239 aaPredicted RBP18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 TATP17735 454 aaPredicted RBP18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 SSFA2P28290 1259 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 HSPA2P54652 639 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 KIF1BPQ96EK5 621 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 AK9Q5TCS8 1911 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 ST18O60284 1047 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 PHKG2P15735 406 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 ZNF790Q6PG37 636 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 NFATC2IPQ8NCF5 419 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 SLC52A2Q9HAB3 445 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 HYPKQ9NX55 129 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 AOX1Q06278 1338 aa18.18■□□□□ 0.5
CLCNKA-201ENST00000331433 ARXQ96QS3 562 aa18.17■□□□□ 0.5
CLCNKA-201ENST00000331433 ANO2Q9NQ90 1003 aa18.17■□□□□ 0.5
CLCNKA-201ENST00000331433 DCCP43146 1447 aa18.17■□□□□ 0.5
CLCNKA-201ENST00000331433 ALDH1L1O75891 902 aa18.17■□□□□ 0.5
CLCNKA-201ENST00000331433 PDIA6Q15084 440 aa18.17■□□□□ 0.5
CLCNKA-201ENST00000331433 CADPS2Q86UW7 1296 aa18.17■□□□□ 0.5
CLCNKA-201ENST00000331433 GBP4Q96PP9 640 aa18.17■□□□□ 0.5
CLCNKA-201ENST00000331433 COL18A1P39060 1754 aa18.17■□□□□ 0.5
CLCNKA-201ENST00000331433 PI4K2BQ8TCG2 481 aa18.16■□□□□ 0.5
CLCNKA-201ENST00000331433 IL25Q9H293 177 aa18.16■□□□□ 0.5
CLCNKA-201ENST00000331433 DDX21Q9NR30 783 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLCNKA-201ENST00000331433 TNS3Q68CZ2 1445 aa18.16■□□□□ 0.5
CLCNKA-201ENST00000331433 LMTK3Q96Q04 1460 aa18.16■□□□□ 0.5
CLCNKA-201ENST00000331433 OS9Q13438 667 aaPredicted RBP18.16■□□□□ 0.5
CLCNKA-201ENST00000331433 PALD1Q9ULE6 856 aa18.16■□□□□ 0.5
CLCNKA-201ENST00000331433 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
CLCNKA-201ENST00000331433 SCN11AQ9UI33 1791 aa18.16■□□□□ 0.5
CLCNKA-201ENST00000331433 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
CLCNKA-201ENST00000331433 MYL6BP14649 208 aa18.14■□□□□ 0.5
CLCNKA-201ENST00000331433 MTX1Q13505 466 aa18.14■□□□□ 0.5
CLCNKA-201ENST00000331433 PA2G4Q9UQ80 394 aaKnown RBP18.14■□□□□ 0.5
CLCNKA-201ENST00000331433 NEK4P51957 841 aa18.14■□□□□ 0.49
CLCNKA-201ENST00000331433 IFNL2Q8IZJ0 200 aa18.14■□□□□ 0.49
CLCNKA-201ENST00000331433 C5P01031 1676 aa18.14■□□□□ 0.49
CLCNKA-201ENST00000331433 CYP27B1O15528 508 aa18.13■□□□□ 0.49
CLCNKA-201ENST00000331433 HSP90AB4PQ58FF6 505 aa18.13■□□□□ 0.49
CLCNKA-201ENST00000331433 ZGPATQ8N5A5 531 aaKnown RBP18.13■□□□□ 0.49
CLCNKA-201ENST00000331433 LINS1Q8NG48 757 aa18.13■□□□□ 0.49
CLCNKA-201ENST00000331433 ZNF496Q96IT1 587 aaPredicted RBP18.13■□□□□ 0.49
CLCNKA-201ENST00000331433 RTN4Q9NQC3 1192 aaKnown RBP18.13■□□□□ 0.49
CLCNKA-201ENST00000331433 DDX58O95786 925 aaKnown RBP18.13■□□□□ 0.49
CLCNKA-201ENST00000331433 SPATA31A3Q5VYP0 1347 aa18.13■□□□□ 0.49
CLCNKA-201ENST00000331433 GRM8O00222 908 aa18.12■□□□□ 0.49
CLCNKA-201ENST00000331433 MCCP23508 829 aa18.12■□□□□ 0.49
CLCNKA-201ENST00000331433 PKP1Q13835 747 aa18.12■□□□□ 0.49
CLCNKA-201ENST00000331433 SUCLG2Q96I99 432 aa18.12■□□□□ 0.49
CLCNKA-201ENST00000331433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLCNKA-201ENST00000331433 PIP4K2AP48426 406 aaPredicted RBP18.11■□□□□ 0.49
CLCNKA-201ENST00000331433 RIC3Q7Z5B4 369 aa18.11■□□□□ 0.49
CLCNKA-201ENST00000331433 KAZALD1Q96I82 304 aa18.11■□□□□ 0.49
CLCNKA-201ENST00000331433 IGKV5-2P06315 115 aa18.11■□□□□ 0.49
CLCNKA-201ENST00000331433 XAGE3Q8WTP9 111 aa18.1■□□□□ 0.49
CLCNKA-201ENST00000331433 BICC1Q9H694 974 aaKnown RBP18.1■□□□□ 0.49
CLCNKA-201ENST00000331433 GOLGA6L3A6NEY3 463 aa18.1■□□□□ 0.49
CLCNKA-201ENST00000331433 L1TD1Q5T7N2 865 aaKnown RBP18.1■□□□□ 0.49
CLCNKA-201ENST00000331433 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
CLCNKA-201ENST00000331433 FSD2A1L4K1 749 aa18.09■□□□□ 0.49
CLCNKA-201ENST00000331433 COPS6Q7L5N1 327 aa18.09■□□□□ 0.49
CLCNKA-201ENST00000331433 CLASRPQ8N2M8 674 aaKnown RBP18.09■□□□□ 0.49
CLCNKA-201ENST00000331433 DCAF5Q96JK2 942 aa18.09■□□□□ 0.49
CLCNKA-201ENST00000331433 BAG4O95429 457 aaKnown RBP18.09■□□□□ 0.49
CLCNKA-201ENST00000331433 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
CLCNKA-201ENST00000331433 CNTROBQ8N137 903 aa18.09■□□□□ 0.49
CLCNKA-201ENST00000331433 ANAPC15P60006 121 aa18.08■□□□□ 0.49
CLCNKA-201ENST00000331433 NUCB2P80303 420 aa18.08■□□□□ 0.49
CLCNKA-201ENST00000331433 BRINP3Q76B58 766 aa18.08■□□□□ 0.49
CLCNKA-201ENST00000331433 NOL8Q76FK4 1167 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms