RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 COL15A1P39059 1388 aa24.19■■□□□ 1.46
RAB28-202ENST00000330852 ZBTB1Q9Y2K1 713 aa24.18■■□□□ 1.46
RAB28-202ENST00000330852 HEG1Q9ULI3 1381 aa24.18■■□□□ 1.46
RAB28-202ENST00000330852 A0A0G2JLW4 131 aa24.18■■□□□ 1.46
RAB28-202ENST00000330852 GIGYF1O75420 1035 aaPredicted RBP24.18■■□□□ 1.46
RAB28-202ENST00000330852 C1QTNF8P60827 252 aa24.18■■□□□ 1.46
RAB28-202ENST00000330852 DDR1Q08345 913 aa24.17■■□□□ 1.46
RAB28-202ENST00000330852 USPL1Q5W0Q7 1092 aa24.17■■□□□ 1.46
RAB28-202ENST00000330852 ZNF496Q96IT1 587 aaPredicted RBP24.17■■□□□ 1.46
RAB28-202ENST00000330852 ADCY9O60503 1353 aa24.17■■□□□ 1.46
RAB28-202ENST00000330852 A0A087WZG4 1122 aa24.16■■□□□ 1.46
RAB28-202ENST00000330852 DPEP1P16444 411 aa24.16■■□□□ 1.46
RAB28-202ENST00000330852 FMNL2Q96PY5 1086 aa24.16■■□□□ 1.46
RAB28-202ENST00000330852 ARFGEF1Q9Y6D6 1849 aa24.16■■□□□ 1.46
RAB28-202ENST00000330852 ATP10DQ9P241 1426 aa24.16■■□□□ 1.46
RAB28-202ENST00000330852 HTATSF1O43719 755 aaKnown RBP24.15■■□□□ 1.46
RAB28-202ENST00000330852 WWC3Q9ULE0 1092 aa24.15■■□□□ 1.46
RAB28-202ENST00000330852 POLRMTO00411 1230 aaKnown RBP24.15■■□□□ 1.46
RAB28-202ENST00000330852 RTF1Q92541 710 aaKnown RBP24.15■■□□□ 1.46
RAB28-202ENST00000330852 BCS1LQ9Y276 419 aa24.15■■□□□ 1.46
RAB28-202ENST00000330852 EIF5P55010 431 aaKnown RBP24.14■■□□□ 1.45
RAB28-202ENST00000330852 AFDNP55196 1824 aaKnown RBP24.14■■□□□ 1.45
RAB28-202ENST00000330852 BTBD11A6QL63 1104 aa24.13■■□□□ 1.45
RAB28-202ENST00000330852 CANXP27824 592 aaKnown RBP24.13■■□□□ 1.45
RAB28-202ENST00000330852 PIM2Q9P1W9 311 aa24.13■■□□□ 1.45
RAB28-202ENST00000330852 KCNA3P22001 575 aa24.13■■□□□ 1.45
RAB28-202ENST00000330852 NRXN2Q9P2S2 1712 aa24.12■■□□□ 1.45
RAB28-202ENST00000330852 NEFMP07197 916 aa24.11■■□□□ 1.45
RAB28-202ENST00000330852 NFIXQ14938 502 aa24.11■■□□□ 1.45
RAB28-202ENST00000330852 IL6STP40189 918 aaPredicted RBP24.1■■□□□ 1.45
RAB28-202ENST00000330852 GPBP1L1Q9HC44 474 aaPredicted RBP24.1■■□□□ 1.45
RAB28-202ENST00000330852 BCL2L12Q9HB09 334 aa24.1■■□□□ 1.45
RAB28-202ENST00000330852 DALRD3Q5D0E6 543 aaKnown RBP24.08■■□□□ 1.45
RAB28-202ENST00000330852 NPM2Q86SE8 214 aaKnown RBP24.08■■□□□ 1.45
RAB28-202ENST00000330852 ARHGAP27Q6ZUM4 889 aa24.07■■□□□ 1.44
RAB28-202ENST00000330852 PNNQ9H307 717 aaKnown RBP24.07■■□□□ 1.44
RAB28-202ENST00000330852 SERPINB2P05120 415 aa24.07■■□□□ 1.44
RAB28-202ENST00000330852 DLG5Q8TDM6 1919 aa24.06■■□□□ 1.44
RAB28-202ENST00000330852 MCM10Q7L590 875 aa24.06■■□□□ 1.44
RAB28-202ENST00000330852 SCN7AQ01118 1682 aa24.05■■□□□ 1.44
RAB28-202ENST00000330852 KCNQ3O43525 872 aa24.04■■□□□ 1.44
RAB28-202ENST00000330852 SNRPA1P09661 255 aaKnown RBP24.04■■□□□ 1.44
RAB28-202ENST00000330852 TAF7Q15545 349 aaPredicted RBP24.04■■□□□ 1.44
RAB28-202ENST00000330852 DLEC1Q9Y238 1755 aa24.04■■□□□ 1.44
RAB28-202ENST00000330852 A1BGP04217 495 aa24.03■■□□□ 1.44
RAB28-202ENST00000330852 CHRNA5P30532 468 aa24.03■■□□□ 1.44
RAB28-202ENST00000330852 RALBP1Q15311 655 aa24.03■■□□□ 1.44
RAB28-202ENST00000330852 PDZRN3Q9UPQ7 1066 aa24.02■■□□□ 1.44
RAB28-202ENST00000330852 SENP3-EIF4A1A0A087X0R7 540 aa24.01■■□□□ 1.43
RAB28-202ENST00000330852 PNISRQ8TF01 805 aaKnown RBP24.01■■□□□ 1.43
RAB28-202ENST00000330852 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
RAB28-202ENST00000330852 TBC1D2BQ9UPU7 963 aa24.01■■□□□ 1.43
RAB28-202ENST00000330852 ZNF330Q9Y3S2 320 aaPredicted RBP24.01■■□□□ 1.43
RAB28-202ENST00000330852 USP16Q9Y5T5 823 aa24.01■■□□□ 1.43
RAB28-202ENST00000330852 DCTN1Q14203 1278 aa24■■□□□ 1.43
RAB28-202ENST00000330852 TBC1D9BQ66K14 1250 aa23.99■■□□□ 1.43
RAB28-202ENST00000330852 ZNF526Q8TF50 670 aaPredicted RBP23.99■■□□□ 1.43
RAB28-202ENST00000330852 SBF1O95248 1867 aa23.99■■□□□ 1.43
RAB28-202ENST00000330852 CARMIL3Q8ND23 1372 aa23.99■■□□□ 1.43
RAB28-202ENST00000330852 BCORQ6W2J9 1755 aa23.99■■□□□ 1.43
RAB28-202ENST00000330852 BICDL1Q6ZP65 573 aa23.98■■□□□ 1.43
RAB28-202ENST00000330852 H0YIN7 160 aa23.98■■□□□ 1.43
RAB28-202ENST00000330852 RGL2O15211 777 aa23.98■■□□□ 1.43
RAB28-202ENST00000330852 CAMTA2O94983 1202 aa23.98■■□□□ 1.43
RAB28-202ENST00000330852 NFE2L2Q16236 605 aa23.98■■□□□ 1.43
RAB28-202ENST00000330852 CLEC4GQ6UXB4 293 aa23.97■■□□□ 1.43
RAB28-202ENST00000330852 DZIP3Q86Y13 1208 aaKnown RBP23.97■■□□□ 1.43
RAB28-202ENST00000330852 SETDB2Q96T68 719 aa23.97■■□□□ 1.43
RAB28-202ENST00000330852 TTLL6Q8N841 843 aa23.96■■□□□ 1.43
RAB28-202ENST00000330852 BRIP1Q9BX63 1249 aa23.96■■□□□ 1.43
RAB28-202ENST00000330852 MAPK8IP3Q9UPT6 1336 aa23.96■■□□□ 1.43
RAB28-202ENST00000330852 KDM3BQ7LBC6 1761 aa23.96■■□□□ 1.43
RAB28-202ENST00000330852 PDE6BP35913 854 aa23.96■■□□□ 1.43
RAB28-202ENST00000330852 C9orf131Q5VYM1 1079 aa23.96■■□□□ 1.43
RAB28-202ENST00000330852 C2CD5Q86YS7 1000 aa23.96■■□□□ 1.43
RAB28-202ENST00000330852 ANKRD31Q8N7Z5 1873 aa23.95■■□□□ 1.43
RAB28-202ENST00000330852 ZNF652Q9Y2D9 606 aa23.95■■□□□ 1.42
RAB28-202ENST00000330852 LAMB4A4D0S4 1761 aa23.94■■□□□ 1.42
RAB28-202ENST00000330852 PRAMEF22A3QJZ6 481 aa23.93■■□□□ 1.42
RAB28-202ENST00000330852 KIF3CO14782 793 aa23.93■■□□□ 1.42
RAB28-202ENST00000330852 PRR5LQ6MZQ0 368 aa23.93■■□□□ 1.42
RAB28-202ENST00000330852 CNBD1Q8NA66 436 aa23.91■■□□□ 1.42
RAB28-202ENST00000330852 ZC3H4Q9UPT8 1303 aaKnown RBP23.9■■□□□ 1.42
RAB28-202ENST00000330852 DDX10Q13206 875 aaKnown RBP23.9■■□□□ 1.42
RAB28-202ENST00000330852 RNF181Q9P0P0 153 aa23.9■■□□□ 1.42
RAB28-202ENST00000330852 NBPF26B4DH59 902 aa23.9■■□□□ 1.42
RAB28-202ENST00000330852 ST5P78524 1137 aa23.9■■□□□ 1.42
RAB28-202ENST00000330852 NBPF10Q6P3W6 841 aaKnown RBP23.9■■□□□ 1.42
RAB28-202ENST00000330852 NBPF15Q8N660 670 aa23.9■■□□□ 1.42
RAB28-202ENST00000330852 MIS18AQ9NYP9 233 aa23.9■■□□□ 1.42
RAB28-202ENST00000330852 MYBBP1AQ9BQG0 1328 aaKnown RBP23.89■■□□□ 1.42
RAB28-202ENST00000330852 NPHP1O15259 732 aa23.89■■□□□ 1.41
RAB28-202ENST00000330852 CCDC88AQ3V6T2 1871 aa23.88■■□□□ 1.41
RAB28-202ENST00000330852 KDM2BQ8NHM5 1336 aa23.88■■□□□ 1.41
RAB28-202ENST00000330852 PIP4K2AP48426 406 aaPredicted RBP23.88■■□□□ 1.41
RAB28-202ENST00000330852 EIF4A1P60842 406 aaKnown RBP23.87■■□□□ 1.41
RAB28-202ENST00000330852 TOMM70O94826 608 aa23.87■■□□□ 1.41
RAB28-202ENST00000330852 LMNB1P20700 586 aa23.87■■□□□ 1.41
RAB28-202ENST00000330852 BABAM1Q9NWV8 329 aa23.87■■□□□ 1.41
RAB28-202ENST00000330852 HSPA6P17066 643 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms