RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
EPHB3-201ENST00000330394 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
EPHB3-201ENST00000330394 FSIP1Q8NA03 581 aa16.48■□□□□ 0.23
EPHB3-201ENST00000330394 RIOK3O14730 519 aaKnown RBP16.48■□□□□ 0.23
EPHB3-201ENST00000330394 F13A1P00488 732 aa16.48■□□□□ 0.23
EPHB3-201ENST00000330394 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
EPHB3-201ENST00000330394 DHX37Q8IY37 1157 aaKnown RBP16.47■□□□□ 0.23
EPHB3-201ENST00000330394 SLC26A8Q96RN1 970 aa16.47■□□□□ 0.23
EPHB3-201ENST00000330394 C14orf93Q9H972 538 aaKnown RBP16.47■□□□□ 0.23
EPHB3-201ENST00000330394 NLRP2Q9NX02 1062 aa16.47■□□□□ 0.23
EPHB3-201ENST00000330394 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
EPHB3-201ENST00000330394 ZNF530Q6P9A1 599 aaPredicted RBP16.47■□□□□ 0.23
EPHB3-201ENST00000330394 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
EPHB3-201ENST00000330394 KIF14Q15058 1648 aa16.47■□□□□ 0.23
EPHB3-201ENST00000330394 DHX16O60231 1041 aaKnown RBP16.47■□□□□ 0.23
EPHB3-201ENST00000330394 SNW1Q13573 536 aaKnown RBP16.47■□□□□ 0.23
EPHB3-201ENST00000330394 PPFIBP1Q86W92 1011 aa16.47■□□□□ 0.23
EPHB3-201ENST00000330394 PPP1R9BQ96SB3 815 aa16.47■□□□□ 0.23
EPHB3-201ENST00000330394 LRRC2Q9BYS8 371 aa16.47■□□□□ 0.23
EPHB3-201ENST00000330394 MTMR7Q9Y216 660 aa16.47■□□□□ 0.23
EPHB3-201ENST00000330394 CTTNBP2Q8WZ74 1663 aa16.46■□□□□ 0.23
EPHB3-201ENST00000330394 SYT1P21579 422 aa16.46■□□□□ 0.23
EPHB3-201ENST00000330394 ZNF692Q9BU19 519 aaPredicted RBP16.46■□□□□ 0.23
EPHB3-201ENST00000330394 TSPYL1Q9H0U9 437 aa16.46■□□□□ 0.23
EPHB3-201ENST00000330394 SLC52A1Q9NWF4 448 aa16.46■□□□□ 0.23
EPHB3-201ENST00000330394 ERICH2A1L162 156 aa16.46■□□□□ 0.22
EPHB3-201ENST00000330394 AK2P54819 239 aa16.46■□□□□ 0.22
EPHB3-201ENST00000330394 TYRO3Q06418 890 aa16.46■□□□□ 0.22
EPHB3-201ENST00000330394 HSP90AA4PQ58FG1 418 aa16.46■□□□□ 0.22
EPHB3-201ENST00000330394 USHBP1Q8N6Y0 703 aa16.46■□□□□ 0.22
EPHB3-201ENST00000330394 JMYQ8N9B5 988 aa16.46■□□□□ 0.22
EPHB3-201ENST00000330394 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.22
EPHB3-201ENST00000330394 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.22
EPHB3-201ENST00000330394 KIF2AO00139 706 aaPredicted RBP16.45■□□□□ 0.22
EPHB3-201ENST00000330394 FILIP1LQ4L180 1135 aa16.45■□□□□ 0.22
EPHB3-201ENST00000330394 MYRIPQ8NFW9 859 aa16.45■□□□□ 0.22
EPHB3-201ENST00000330394 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
EPHB3-201ENST00000330394 PAXBP1Q9Y5B6 917 aa16.45■□□□□ 0.22
EPHB3-201ENST00000330394 KRT32Q14532 448 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 RAB11FIP4Q86YS3 637 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 ERCC4Q92889 916 aaPredicted RBP16.44■□□□□ 0.22
EPHB3-201ENST00000330394 TIGD1Q96MW7 591 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 TRIM35Q9UPQ4 493 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 UHRF1BP1Q6BDS2 1440 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 PTPRCP08575 1304 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 RHPN1Q8TCX5 695 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 CPLX3Q8WVH0 158 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
EPHB3-201ENST00000330394 GTPBP4Q9BZE4 634 aaKnown RBP16.44■□□□□ 0.22
EPHB3-201ENST00000330394 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 WDR62O43379 1518 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
EPHB3-201ENST00000330394 KLHL10Q6JEL2 608 aa16.43■□□□□ 0.22
EPHB3-201ENST00000330394 ECHDC1Q9NTX5 307 aa16.43■□□□□ 0.22
EPHB3-201ENST00000330394 GNAT3A8MTJ3 354 aa16.43■□□□□ 0.22
EPHB3-201ENST00000330394 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
EPHB3-201ENST00000330394 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
EPHB3-201ENST00000330394 ERLIN1O75477 346 aa16.43■□□□□ 0.22
EPHB3-201ENST00000330394 BMS1Q14692 1282 aaKnown RBP16.43■□□□□ 0.22
EPHB3-201ENST00000330394 SMTNL1A8MU46 457 aa16.43■□□□□ 0.22
EPHB3-201ENST00000330394 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
EPHB3-201ENST00000330394 GTF2E1P29083 439 aaPredicted RBP16.43■□□□□ 0.22
EPHB3-201ENST00000330394 ARHGAP29Q52LW3 1261 aa16.43■□□□□ 0.22
EPHB3-201ENST00000330394 GPT2Q8TD30 523 aa16.43■□□□□ 0.22
EPHB3-201ENST00000330394 DNAI1Q9UI46 699 aa16.43■□□□□ 0.22
EPHB3-201ENST00000330394 FAM135AQ9P2D6 1515 aa16.43■□□□□ 0.22
EPHB3-201ENST00000330394 LMAN1P49257 510 aa16.42■□□□□ 0.22
EPHB3-201ENST00000330394 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
EPHB3-201ENST00000330394 ZNF521Q96K83 1311 aa16.42■□□□□ 0.22
EPHB3-201ENST00000330394 CBFA2T2O43439 604 aa16.42■□□□□ 0.22
EPHB3-201ENST00000330394 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
EPHB3-201ENST00000330394 CHMLP26374 656 aa16.42■□□□□ 0.22
EPHB3-201ENST00000330394 ANAPC15P60006 121 aa16.42■□□□□ 0.22
EPHB3-201ENST00000330394 PI4KAP2A4QPH2 592 aa16.42■□□□□ 0.22
EPHB3-201ENST00000330394 PI4KAP1Q8N8J0 262 aa16.42■□□□□ 0.22
EPHB3-201ENST00000330394 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
EPHB3-201ENST00000330394 IBSPP21815 317 aaPredicted RBP16.41■□□□□ 0.22
EPHB3-201ENST00000330394 TRMT2AQ8IZ69 625 aaKnown RBP16.41■□□□□ 0.22
EPHB3-201ENST00000330394 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
EPHB3-201ENST00000330394 CCDC82Q8N4S0 544 aa16.41■□□□□ 0.22
EPHB3-201ENST00000330394 SMARCE1Q969G3 411 aa16.41■□□□□ 0.22
EPHB3-201ENST00000330394 GSPT1P15170 499 aaKnown RBP16.41■□□□□ 0.22
EPHB3-201ENST00000330394 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
EPHB3-201ENST00000330394 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
EPHB3-201ENST00000330394 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
EPHB3-201ENST00000330394 KIF4BQ2VIQ3 1234 aa16.41■□□□□ 0.22
EPHB3-201ENST00000330394 SYCP2Q9BX26 1530 aa16.4■□□□□ 0.22
EPHB3-201ENST00000330394 STX1AQ16623 288 aa16.4■□□□□ 0.22
EPHB3-201ENST00000330394 VPS53Q5VIR6 699 aa16.4■□□□□ 0.22
EPHB3-201ENST00000330394 BRF1Q92994 677 aa16.4■□□□□ 0.22
EPHB3-201ENST00000330394 ZNF500O60304 480 aaPredicted RBP16.4■□□□□ 0.22
EPHB3-201ENST00000330394 DNAAF4Q8WXU2 420 aa16.4■□□□□ 0.22
EPHB3-201ENST00000330394 GTF3C6Q969F1 213 aa16.4■□□□□ 0.22
EPHB3-201ENST00000330394 SLC3A2P08195 630 aaKnown RBP16.4■□□□□ 0.22
EPHB3-201ENST00000330394 NEMFO60524 1076 aa16.4■□□□□ 0.22
EPHB3-201ENST00000330394 TERF1P54274 439 aa16.4■□□□□ 0.22
EPHB3-201ENST00000330394 GNG11P61952 73 aa16.4■□□□□ 0.22
EPHB3-201ENST00000330394 PLEKHO1Q53GL0 409 aaPredicted RBP16.4■□□□□ 0.22
EPHB3-201ENST00000330394 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
EPHB3-201ENST00000330394 A2MP01023 1474 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms