RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 USPL1Q5W0Q7 1092 aa23.72■■□□□ 1.39
PTPMT1-201ENST00000326656 BRCA1P38398 1863 aaKnown RBP23.71■■□□□ 1.39
PTPMT1-201ENST00000326656 KCNA3P22001 575 aa23.71■■□□□ 1.39
PTPMT1-201ENST00000326656 ZNF790Q6PG37 636 aa23.71■■□□□ 1.39
PTPMT1-201ENST00000326656 PIM2Q9P1W9 311 aa23.71■■□□□ 1.39
PTPMT1-201ENST00000326656 COL15A1P39059 1388 aa23.7■■□□□ 1.38
PTPMT1-201ENST00000326656 POLRMTO00411 1230 aaKnown RBP23.7■■□□□ 1.38
PTPMT1-201ENST00000326656 PPP2R1AP30153 589 aa23.7■■□□□ 1.38
PTPMT1-201ENST00000326656 RSPH6AQ9H0K4 717 aa23.7■■□□□ 1.38
PTPMT1-201ENST00000326656 ZBTB1Q9Y2K1 713 aa23.7■■□□□ 1.38
PTPMT1-201ENST00000326656 CEMIPQ8WUJ3 1361 aa23.69■■□□□ 1.38
PTPMT1-201ENST00000326656 A0A087WZG4 1122 aa23.69■■□□□ 1.38
PTPMT1-201ENST00000326656 FCHSD2O94868 740 aa23.69■■□□□ 1.38
PTPMT1-201ENST00000326656 PRKAR2BP31323 418 aa23.69■■□□□ 1.38
PTPMT1-201ENST00000326656 PHACTR3Q96KR7 559 aa23.69■■□□□ 1.38
PTPMT1-201ENST00000326656 SIPA1L3O60292 1781 aaPredicted RBP23.68■■□□□ 1.38
PTPMT1-201ENST00000326656 IFFO2Q5TF58 517 aa23.68■■□□□ 1.38
PTPMT1-201ENST00000326656 ARHGAP27Q6ZUM4 889 aa23.68■■□□□ 1.38
PTPMT1-201ENST00000326656 ZNF496Q96IT1 587 aaPredicted RBP23.68■■□□□ 1.38
PTPMT1-201ENST00000326656 HEG1Q9ULI3 1381 aa23.67■■□□□ 1.38
PTPMT1-201ENST00000326656 CEP350Q5VT06 3117 aa23.67■■□□□ 1.38
PTPMT1-201ENST00000326656 EIF5P55010 431 aaKnown RBP23.67■■□□□ 1.38
PTPMT1-201ENST00000326656 ARFGEF1Q9Y6D6 1849 aa23.67■■□□□ 1.38
PTPMT1-201ENST00000326656 U2AF1L5P0DN76 240 aaPredicted RBP23.66■■□□□ 1.38
PTPMT1-201ENST00000326656 U2AF1Q01081 240 aaKnown RBP eCLIP23.66■■□□□ 1.38
PTPMT1-201ENST00000326656 NFIXQ14938 502 aa23.66■■□□□ 1.38
PTPMT1-201ENST00000326656 DALRD3Q5D0E6 543 aaKnown RBP23.66■■□□□ 1.38
PTPMT1-201ENST00000326656 FMNL2Q96PY5 1086 aa23.66■■□□□ 1.38
PTPMT1-201ENST00000326656 CANXP27824 592 aaKnown RBP23.65■■□□□ 1.38
PTPMT1-201ENST00000326656 ZNF526Q8TF50 670 aaPredicted RBP23.64■■□□□ 1.37
PTPMT1-201ENST00000326656 BCL2L12Q9HB09 334 aa23.64■■□□□ 1.37
PTPMT1-201ENST00000326656 HTATSF1O43719 755 aaKnown RBP23.63■■□□□ 1.37
PTPMT1-201ENST00000326656 BTBD11A6QL63 1104 aa23.62■■□□□ 1.37
PTPMT1-201ENST00000326656 IL6STP40189 918 aaPredicted RBP23.62■■□□□ 1.37
PTPMT1-201ENST00000326656 RTF1Q92541 710 aaKnown RBP23.62■■□□□ 1.37
PTPMT1-201ENST00000326656 NRXN2Q9P2S2 1712 aa23.62■■□□□ 1.37
PTPMT1-201ENST00000326656 SERPINB2P05120 415 aa23.61■■□□□ 1.37
PTPMT1-201ENST00000326656 AFDNP55196 1824 aaKnown RBP23.61■■□□□ 1.37
PTPMT1-201ENST00000326656 NPM2Q86SE8 214 aaKnown RBP23.6■■□□□ 1.37
PTPMT1-201ENST00000326656 CHRNA5P30532 468 aa23.59■■□□□ 1.37
PTPMT1-201ENST00000326656 PDZRN3Q9UPQ7 1066 aa23.58■■□□□ 1.37
PTPMT1-201ENST00000326656 KIF3CO14782 793 aa23.56■■□□□ 1.36
PTPMT1-201ENST00000326656 NEFMP07197 916 aa23.56■■□□□ 1.36
PTPMT1-201ENST00000326656 C9orf131Q5VYM1 1079 aa23.55■■□□□ 1.36
PTPMT1-201ENST00000326656 H0YIN7 160 aa23.54■■□□□ 1.36
PTPMT1-201ENST00000326656 KCNQ3O43525 872 aa23.54■■□□□ 1.36
PTPMT1-201ENST00000326656 A1BGP04217 495 aa23.54■■□□□ 1.36
PTPMT1-201ENST00000326656 SNRPA1P09661 255 aaKnown RBP23.54■■□□□ 1.36
PTPMT1-201ENST00000326656 MCM10Q7L590 875 aa23.54■■□□□ 1.36
PTPMT1-201ENST00000326656 TBC1D2BQ9UPU7 963 aa23.54■■□□□ 1.36
PTPMT1-201ENST00000326656 TAF7Q15545 349 aaPredicted RBP23.53■■□□□ 1.36
PTPMT1-201ENST00000326656 TTLL6Q8N841 843 aa23.53■■□□□ 1.36
PTPMT1-201ENST00000326656 BRIP1Q9BX63 1249 aa23.53■■□□□ 1.36
PTPMT1-201ENST00000326656 DLEC1Q9Y238 1755 aa23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 SCN7AQ01118 1682 aa23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 HSPA6P17066 643 aa23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 TBC1D9BQ66K14 1250 aa23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 BICDL1Q6ZP65 573 aa23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 C2CD5Q86YS7 1000 aa23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 PNNQ9H307 717 aaKnown RBP23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 ZNF330Q9Y3S2 320 aaPredicted RBP23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 USP16Q9Y5T5 823 aa23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 CARMIL3Q8ND23 1372 aa23.52■■□□□ 1.36
PTPMT1-201ENST00000326656 RGL2O15211 777 aa23.51■■□□□ 1.35
PTPMT1-201ENST00000326656 TOMM70O94826 608 aa23.51■■□□□ 1.35
PTPMT1-201ENST00000326656 PDE6BP35913 854 aa23.51■■□□□ 1.35
PTPMT1-201ENST00000326656 CLEC4GQ6UXB4 293 aa23.51■■□□□ 1.35
PTPMT1-201ENST00000326656 SETDB2Q96T68 719 aa23.51■■□□□ 1.35
PTPMT1-201ENST00000326656 SBF1O95248 1867 aa23.51■■□□□ 1.35
PTPMT1-201ENST00000326656 CAMTA2O94983 1202 aa23.5■■□□□ 1.35
PTPMT1-201ENST00000326656 ZC3H4Q9UPT8 1303 aaKnown RBP23.5■■□□□ 1.35
PTPMT1-201ENST00000326656 DZIP3Q86Y13 1208 aaKnown RBP23.49■■□□□ 1.35
PTPMT1-201ENST00000326656 RNF181Q9P0P0 153 aa23.49■■□□□ 1.35
PTPMT1-201ENST00000326656 KDM2BQ8NHM5 1336 aa23.49■■□□□ 1.35
PTPMT1-201ENST00000326656 PNISRQ8TF01 805 aaKnown RBP23.48■■□□□ 1.35
PTPMT1-201ENST00000326656 DCTN1Q14203 1278 aa23.47■■□□□ 1.35
PTPMT1-201ENST00000326656 PRR5LQ6MZQ0 368 aa23.47■■□□□ 1.35
PTPMT1-201ENST00000326656 PLEKHF1Q96S99 279 aa23.46■■□□□ 1.35
PTPMT1-201ENST00000326656 ZNF652Q9Y2D9 606 aa23.46■■□□□ 1.35
PTPMT1-201ENST00000326656 LMNB1P20700 586 aa23.45■■□□□ 1.34
PTPMT1-201ENST00000326656 CNBD1Q8NA66 436 aa23.45■■□□□ 1.34
PTPMT1-201ENST00000326656 NMRK2Q9NPI5 230 aa23.45■■□□□ 1.34
PTPMT1-201ENST00000326656 RALBP1Q15311 655 aa23.44■■□□□ 1.34
PTPMT1-201ENST00000326656 ANKRD31Q8N7Z5 1873 aa23.44■■□□□ 1.34
PTPMT1-201ENST00000326656 BCORQ6W2J9 1755 aa23.44■■□□□ 1.34
PTPMT1-201ENST00000326656 PRAMEF22A3QJZ6 481 aa23.43■■□□□ 1.34
PTPMT1-201ENST00000326656 ST5P78524 1137 aa23.43■■□□□ 1.34
PTPMT1-201ENST00000326656 NFE2L2Q16236 605 aa23.43■■□□□ 1.34
PTPMT1-201ENST00000326656 DLG5Q8TDM6 1919 aa23.43■■□□□ 1.34
PTPMT1-201ENST00000326656 NBPF26B4DH59 902 aa23.42■■□□□ 1.34
PTPMT1-201ENST00000326656 NPHP1O15259 732 aa23.42■■□□□ 1.34
PTPMT1-201ENST00000326656 NBPF10Q6P3W6 841 aaKnown RBP23.42■■□□□ 1.34
PTPMT1-201ENST00000326656 NBPF15Q8N660 670 aa23.42■■□□□ 1.34
PTPMT1-201ENST00000326656 RBM46Q8TBY0 533 aaKnown RBP23.42■■□□□ 1.34
PTPMT1-201ENST00000326656 ZNF622Q969S3 477 aaKnown RBP eCLIP23.42■■□□□ 1.34
PTPMT1-201ENST00000326656 STYK1Q6J9G0 422 aa23.41■■□□□ 1.34
PTPMT1-201ENST00000326656 C16orf71Q8IYS4 520 aaPredicted RBP23.41■■□□□ 1.34
PTPMT1-201ENST00000326656 CNKSR1Q969H4 720 aa23.41■■□□□ 1.34
PTPMT1-201ENST00000326656 MAPK8IP3Q9UPT6 1336 aa23.4■■□□□ 1.34
PTPMT1-201ENST00000326656 APLP1P51693 650 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms