RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 ESYT1Q9BSJ8 1104 aa21.89■■□□□ 1.1
TRAPPC12-201ENST00000324266 USP6P35125 1406 aa21.89■■□□□ 1.09
TRAPPC12-201ENST00000324266 SYCE3A1L190 88 aa21.88■■□□□ 1.09
TRAPPC12-201ENST00000324266 TRIM6-TRIM34B2RNG4 842 aa21.88■■□□□ 1.09
TRAPPC12-201ENST00000324266 HSPA2P54652 639 aa21.88■■□□□ 1.09
TRAPPC12-201ENST00000324266 LRRCC1Q9C099 1032 aa21.88■■□□□ 1.09
TRAPPC12-201ENST00000324266 SALL3Q9BXA9 1300 aa21.88■■□□□ 1.09
TRAPPC12-201ENST00000324266 RGPD1P0DJD0 1748 aa21.87■■□□□ 1.09
TRAPPC12-201ENST00000324266 MX1P20591 662 aa21.87■■□□□ 1.09
TRAPPC12-201ENST00000324266 IRX5P78411 483 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC12-201ENST00000324266 FKBP5Q13451 457 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC12-201ENST00000324266 SECISBP2LQ93073 1101 aaKnown RBP21.87■■□□□ 1.09
TRAPPC12-201ENST00000324266 ANO2Q9NQ90 1003 aa21.87■■□□□ 1.09
TRAPPC12-201ENST00000324266 PLEKHG3A1L390 1219 aa21.87■■□□□ 1.09
TRAPPC12-201ENST00000324266 STK31Q9BXU1 1019 aa21.87■■□□□ 1.09
TRAPPC12-201ENST00000324266 FLIIQ13045 1269 aa21.86■■□□□ 1.09
TRAPPC12-201ENST00000324266 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC12-201ENST00000324266 IRX3P78415 501 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC12-201ENST00000324266 UNC5CLQ8IV45 518 aa21.86■■□□□ 1.09
TRAPPC12-201ENST00000324266 FOXD4L6Q3SYB3 417 aaPredicted RBP21.85■■□□□ 1.09
TRAPPC12-201ENST00000324266 FOXD4L3Q6VB84 417 aaPredicted RBP21.85■■□□□ 1.09
TRAPPC12-201ENST00000324266 EYA1Q99502 592 aa21.85■■□□□ 1.09
TRAPPC12-201ENST00000324266 USP31Q70CQ4 1352 aa21.85■■□□□ 1.09
TRAPPC12-201ENST00000324266 BRD2P25440 801 aaKnown RBP21.85■■□□□ 1.09
TRAPPC12-201ENST00000324266 CHMLP26374 656 aa21.85■■□□□ 1.09
TRAPPC12-201ENST00000324266 ARHGEF10O15013 1369 aa21.85■■□□□ 1.09
TRAPPC12-201ENST00000324266 DIP2AQ14689 1571 aa21.84■■□□□ 1.09
TRAPPC12-201ENST00000324266 SLC20A2Q08357 652 aa21.84■■□□□ 1.09
TRAPPC12-201ENST00000324266 NPHP4O75161 1426 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC12-201ENST00000324266 KCNA6P17658 529 aa21.84■■□□□ 1.09
TRAPPC12-201ENST00000324266 JARID2Q92833 1246 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC12-201ENST00000324266 UPF3BQ9BZI7 483 aaKnown RBP21.84■■□□□ 1.09
TRAPPC12-201ENST00000324266 LRSAM1Q6UWE0 723 aa21.83■■□□□ 1.09
TRAPPC12-201ENST00000324266 LRRFIP2Q9Y608 721 aaKnown RBP21.83■■□□□ 1.09
TRAPPC12-201ENST00000324266 ATP8B2P98198 1209 aa21.83■■□□□ 1.09
TRAPPC12-201ENST00000324266 BRD1O95696 1058 aa21.82■■□□□ 1.08
TRAPPC12-201ENST00000324266 AMPHP49418 695 aa21.82■■□□□ 1.08
TRAPPC12-201ENST00000324266 RNF214Q8ND24 703 aa21.82■■□□□ 1.08
TRAPPC12-201ENST00000324266 IL25Q9H293 177 aa21.82■■□□□ 1.08
TRAPPC12-201ENST00000324266 MCCP23508 829 aa21.82■■□□□ 1.08
TRAPPC12-201ENST00000324266 RGS22Q8NE09 1264 aa21.82■■□□□ 1.08
TRAPPC12-201ENST00000324266 TSC1Q92574 1164 aa21.82■■□□□ 1.08
TRAPPC12-201ENST00000324266 IL1RAPL2Q9NP60 686 aa21.82■■□□□ 1.08
TRAPPC12-201ENST00000324266 IGSF3O75054 1194 aa21.81■■□□□ 1.08
TRAPPC12-201ENST00000324266 GNAI3P08754 354 aa21.81■■□□□ 1.08
TRAPPC12-201ENST00000324266 CUL4AQ13619 759 aa21.81■■□□□ 1.08
TRAPPC12-201ENST00000324266 GTF2F1P35269 517 aaKnown RBP eCLIP21.81■■□□□ 1.08
TRAPPC12-201ENST00000324266 ZNF771Q7L3S4 317 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC12-201ENST00000324266 NALCNQ8IZF0 1738 aa21.81■■□□□ 1.08
TRAPPC12-201ENST00000324266 SPDYE4A6NLX3 237 aa21.8■■□□□ 1.08
TRAPPC12-201ENST00000324266 MCM2P49736 904 aa21.8■■□□□ 1.08
TRAPPC12-201ENST00000324266 MAPK8IP2Q13387 824 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC12-201ENST00000324266 CCDC30Q5VVM6 783 aa21.8■■□□□ 1.08
TRAPPC12-201ENST00000324266 FLT4P35916 1363 aa21.8■■□□□ 1.08
TRAPPC12-201ENST00000324266 MAP4K4O95819 1239 aaPredicted RBP21.79■■□□□ 1.08
TRAPPC12-201ENST00000324266 DNAJC2Q99543 621 aaKnown RBP21.79■■□□□ 1.08
TRAPPC12-201ENST00000324266 GDPD2Q9HCC8 539 aa21.79■■□□□ 1.08
TRAPPC12-201ENST00000324266 CCDC39Q9UFE4 941 aa21.79■■□□□ 1.08
TRAPPC12-201ENST00000324266 TOPAZ1Q8N9V7 1692 aa21.79■■□□□ 1.08
TRAPPC12-201ENST00000324266 PRIMPOLQ96LW4 560 aa21.79■■□□□ 1.08
TRAPPC12-201ENST00000324266 NUTM1Q86Y26 1132 aa21.78■■□□□ 1.08
TRAPPC12-201ENST00000324266 RBM33Q96EV2 1170 aaKnown RBP21.78■■□□□ 1.08
TRAPPC12-201ENST00000324266 CHMP4AQ9BY43 222 aa21.78■■□□□ 1.08
TRAPPC12-201ENST00000324266 SBNO1A3KN83 1393 aa21.78■■□□□ 1.08
TRAPPC12-201ENST00000324266 KDRP35968 1356 aa21.78■■□□□ 1.08
TRAPPC12-201ENST00000324266 TUBGCP6Q96RT7 1819 aa21.78■■□□□ 1.08
TRAPPC12-201ENST00000324266 KCNJ4P48050 445 aa21.78■■□□□ 1.08
TRAPPC12-201ENST00000324266 IGSF1Q8N6C5 1336 aa21.78■■□□□ 1.08
TRAPPC12-201ENST00000324266 SSH2Q76I76 1423 aa21.78■■□□□ 1.08
TRAPPC12-201ENST00000324266 USP44Q9H0E7 712 aa21.77■■□□□ 1.08
TRAPPC12-201ENST00000324266 MBD3O95983 291 aa21.77■■□□□ 1.08
TRAPPC12-201ENST00000324266 STAP2Q9UGK3 403 aa21.77■■□□□ 1.08
TRAPPC12-201ENST00000324266 ANAPC15P60006 121 aa21.76■■□□□ 1.07
TRAPPC12-201ENST00000324266 NUTM2GQ5VZR2 741 aa21.76■■□□□ 1.07
TRAPPC12-201ENST00000324266 NGDNQ8NEJ9 315 aaKnown RBP21.76■■□□□ 1.07
TRAPPC12-201ENST00000324266 HMGN5P82970 282 aaKnown RBP21.76■■□□□ 1.07
TRAPPC12-201ENST00000324266 XRN1Q8IZH2 1706 aaKnown RBP21.76■■□□□ 1.07
TRAPPC12-201ENST00000324266 GNAT3A8MTJ3 354 aa21.75■■□□□ 1.07
TRAPPC12-201ENST00000324266 GADD45BO75293 160 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC12-201ENST00000324266 FMN2Q9NZ56 1722 aa21.75■■□□□ 1.07
TRAPPC12-201ENST00000324266 LMTK3Q96Q04 1460 aa21.75■■□□□ 1.07
TRAPPC12-201ENST00000324266 IL17REQ8NFR9 667 aa21.75■■□□□ 1.07
TRAPPC12-201ENST00000324266 INTS4Q96HW7 963 aaKnown RBP21.75■■□□□ 1.07
TRAPPC12-201ENST00000324266 UBTFL1P0CB47 393 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC12-201ENST00000324266 LTV1Q96GA3 475 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC12-201ENST00000324266 PHAXQ9H814 394 aaKnown RBP21.74■■□□□ 1.07
TRAPPC12-201ENST00000324266 TPRNQ4KMQ1 711 aa21.74■■□□□ 1.07
TRAPPC12-201ENST00000324266 TTC21AQ8NDW8 1320 aa21.73■■□□□ 1.07
TRAPPC12-201ENST00000324266 KIAA2012Q0VF49 1180 aa21.73■■□□□ 1.07
TRAPPC12-201ENST00000324266 PDCL2Q8N4E4 241 aa21.73■■□□□ 1.07
TRAPPC12-201ENST00000324266 SRCIN1Q9C0H9 1055 aa21.73■■□□□ 1.07
TRAPPC12-201ENST00000324266 LARP6Q9BRS8 491 aaKnown RBP21.72■■□□□ 1.07
TRAPPC12-201ENST00000324266 CHD2O14647 1828 aaKnown RBP21.72■■□□□ 1.07
TRAPPC12-201ENST00000324266 SURF6O75683 361 aaKnown RBP21.72■■□□□ 1.07
TRAPPC12-201ENST00000324266 NLRP6P59044 892 aa21.72■■□□□ 1.07
TRAPPC12-201ENST00000324266 FAM208AQ9UK61 1670 aaKnown RBP21.72■■□□□ 1.07
TRAPPC12-201ENST00000324266 PPP1R42Q7Z4L9 355 aa21.71■■□□□ 1.07
TRAPPC12-201ENST00000324266 SOS1Q07889 1333 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC12-201ENST00000324266 USP48Q86UV5 1035 aa21.71■■□□□ 1.07
TRAPPC12-201ENST00000324266 KIF3AQ9Y496 699 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms