RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 BICDL1Q6ZP65 573 aa12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 CTAGE5O15320 804 aa12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 KIAA1328Q86T90 577 aa12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 CCDC148Q8NFR7 591 aa12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 CLIP2Q9UDT6 1046 aa12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 KIF2AO00139 706 aaPredicted RBP12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 IDI1Q13907 227 aa12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 CASQ1P31415 396 aa12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 SSRP1Q08945 709 aaKnown RBP12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 EIF5P55010 431 aaKnown RBP12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 WWC2Q6AWC2 1192 aa12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 ZNF397Q8NF99 534 aaPredicted RBP12.73□□□□□ -0.37
SNRNP200-201ENST00000323853 FAM83GA6ND36 823 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 ZSCAN12O43309 604 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 CCDC191Q8NCU4 936 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 PHAXQ9H814 394 aaKnown RBP12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 SLC5A1P13866 664 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 ZNF213O14771 459 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 SSBP05455 408 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 IFIT5Q13325 482 aaKnown RBP12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 TSPYL1Q9H0U9 437 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 NAPBQ9H115 298 aa12.72□□□□□ -0.37
SNRNP200-201ENST00000323853 FAM193AP78312 1265 aa12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 GUCY1B3Q02153 619 aa12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 STX6O43752 255 aa12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 ECHDC1Q9NTX5 307 aa12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 DDX19AQ9NUU7 478 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 SLC12A7Q9Y666 1083 aa12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 BAG4O95429 457 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 SFPQP23246 707 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 ABCF2Q9UG63 623 aa12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 SEPT11Q9NVA2 429 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 SEC63Q9UGP8 760 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-201ENST00000323853 USP5P45974 858 aa12.71□□□□□ -0.38
SNRNP200-201ENST00000323853 LARP6Q9BRS8 491 aaKnown RBP12.71□□□□□ -0.38
SNRNP200-201ENST00000323853 PDCL3Q9H2J4 239 aa12.71□□□□□ -0.38
SNRNP200-201ENST00000323853 CCDC196A0A1B0GTZ2 297 aa12.71□□□□□ -0.38
SNRNP200-201ENST00000323853 ZNF76P36508 570 aa12.71□□□□□ -0.38
SNRNP200-201ENST00000323853 MAP3K12Q12852 859 aa12.71□□□□□ -0.38
SNRNP200-201ENST00000323853 ARHGAP29Q52LW3 1261 aa12.71□□□□□ -0.38
SNRNP200-201ENST00000323853 HSP90AB3PQ58FF7 597 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 KIAA0556O60303 1618 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 MINDY4BA8MYZ0 360 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 ZNF287Q9HBT7 754 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 ANKRD18BA2A2Z9 1011 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 GOLGA8AA7E2F4 631 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 GOLGA8BA8MQT2 603 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 NUP153P49790 1475 aaKnown RBP12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 KIAA0754O94854 1291 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 STX1AQ16623 288 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 ZSCAN23Q3MJ62 389 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 MRPL50Q8N5N7 158 aaKnown RBP12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
SNRNP200-201ENST00000323853 RBM27Q9P2N5 1060 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 PLCH2O75038 1416 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 CKAP2LQ8IYA6 745 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 USP25Q9UHP3 1055 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 TOP1P11387 765 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 CCT2P78371 535 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 PPP1R42Q7Z4L9 355 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 UBXN4Q92575 508 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 ACEP12821 1306 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 MPHOSPH10O00566 681 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 WDR62O43379 1518 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 TSHZ3Q63HK5 1081 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 TAF4BQ92750 862 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 ZSCAN29Q8IWY8 852 aaPredicted RBP12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 FSIP1Q8NA03 581 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 HMG20BQ9P0W2 317 aa12.69□□□□□ -0.38
SNRNP200-201ENST00000323853 A0A087WZG4 1122 aa12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 POLR3DP05423 398 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 UVSSAQ2YD98 709 aa12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 TSG101Q99816 390 aa12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 ATP10BO94823 1461 aa12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 TTF1Q15361 905 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 NEMFO60524 1076 aa12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 JAKMIP3Q5VZ66 844 aa12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 TMCO3Q6UWJ1 677 aa12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 CGNQ9P2M7 1197 aaKnown RBP12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 POLR3AO14802 1390 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 KLHL40Q2TBA0 621 aa12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 GDPD2Q9HCC8 539 aa12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 TRMT112Q9UI30 125 aaKnown RBP12.68□□□□□ -0.38
SNRNP200-201ENST00000323853 KIF5CO60282 957 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms