RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 COL4A5P29400 1685 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 IQCA1LA6NCM1 817 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 CYP27B1O15528 508 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 RPS6KA4O75676 772 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 ECE1P42892 770 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 DGKZQ13574 1117 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 PARP3Q9Y6F1 533 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 A0A1W2PP64 1363 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 KTN1Q86UP2 1357 aaKnown RBP4.42□□□□□ -1.7
HIF1A-201ENST00000323441 CENPJQ9HC77 1338 aaPredicted RBP4.42□□□□□ -1.7
HIF1A-201ENST00000323441 DPY19L2Q6NUT2 758 aa4.42□□□□□ -1.7
HIF1A-201ENST00000323441 ZNF646O15015 1829 aaPredicted RBP4.42□□□□□ -1.7
HIF1A-201ENST00000323441 PHF14O94880 888 aa4.41□□□□□ -1.7
HIF1A-201ENST00000323441 CST9Q5W186 159 aa4.41□□□□□ -1.7
HIF1A-201ENST00000323441 DDX21Q9NR30 783 aaKnown RBP eCLIP4.41□□□□□ -1.7
HIF1A-201ENST00000323441 MRC1P22897 1456 aa4.41□□□□□ -1.7
HIF1A-201ENST00000323441 SSC5DA1L4H1 1573 aa4.41□□□□□ -1.7
HIF1A-201ENST00000323441 GNPATO15228 680 aa4.41□□□□□ -1.7
HIF1A-201ENST00000323441 CHRNA5P30532 468 aa4.41□□□□□ -1.7
HIF1A-201ENST00000323441 HOXC9P31274 260 aa4.41□□□□□ -1.7
HIF1A-201ENST00000323441 NBPF15Q8N660 670 aa4.41□□□□□ -1.7
HIF1A-201ENST00000323441 FMR1Q06787 632 aaKnown RBP eCLIP4.4□□□□□ -1.7
HIF1A-201ENST00000323441 TRAPPC3LQ5T215 181 aa4.4□□□□□ -1.7
HIF1A-201ENST00000323441 SIPA1L3O60292 1781 aaPredicted RBP4.4□□□□□ -1.7
HIF1A-201ENST00000323441 ZBTB7CA1YPR0 619 aa4.4□□□□□ -1.7
HIF1A-201ENST00000323441 SYTL4Q96C24 671 aaPredicted RBP4.4□□□□□ -1.7
HIF1A-201ENST00000323441 GPR101Q96P66 508 aaPredicted RBP4.4□□□□□ -1.7
HIF1A-201ENST00000323441 PGAP2Q9UHJ9 254 aa4.4□□□□□ -1.7
HIF1A-201ENST00000323441 KDM2AQ9Y2K7 1162 aa4.4□□□□□ -1.7
HIF1A-201ENST00000323441 SOX10P56693 466 aa4.4□□□□□ -1.71
HIF1A-201ENST00000323441 NBPF1Q3BBV0 1214 aa4.4□□□□□ -1.71
HIF1A-201ENST00000323441 ATG3Q9NT62 314 aa4.4□□□□□ -1.71
HIF1A-201ENST00000323441 PDZRN3Q9UPQ7 1066 aa4.4□□□□□ -1.71
HIF1A-201ENST00000323441 CARMIL3Q8ND23 1372 aa4.4□□□□□ -1.71
HIF1A-201ENST00000323441 SPTBN5Q9NRC6 3674 aaKnown RBP4.4□□□□□ -1.71
HIF1A-201ENST00000323441 NOM1Q5C9Z4 860 aaKnown RBP4.39□□□□□ -1.71
HIF1A-201ENST00000323441 NBPF6Q5VWK0 638 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 PNMA8AQ86V59 439 aaPredicted RBP4.39□□□□□ -1.71
HIF1A-201ENST00000323441 C7orf43Q8WVR3 580 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 NBPF4Q96M43 638 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 PRO3102Q9H379 93 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.39□□□□□ -1.715e-7■■□□□ 12.3
HIF1A-201ENST00000323441 FAM155AB1AL88 458 aaPredicted RBP4.39□□□□□ -1.71
HIF1A-201ENST00000323441 DDNO94850 711 aaPredicted RBP4.39□□□□□ -1.71
HIF1A-201ENST00000323441 CNTROBQ8N137 903 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 RTCBQ9Y3I0 505 aaKnown RBP4.39□□□□□ -1.71
HIF1A-201ENST00000323441 FZD9O00144 591 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 SRPK2P78362 688 aaKnown RBP4.39□□□□□ -1.71
HIF1A-201ENST00000323441 FKBP8Q14318 412 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 SAPCD2Q86UD0 394 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 TTLL6Q8N841 843 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 OTUD5Q96G74 571 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 EVC2Q86UK5 1308 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 SZT2Q5T011 3432 aa4.39□□□□□ -1.71
HIF1A-201ENST00000323441 PKN2Q16513 984 aaKnown RBP4.38□□□□□ -1.71
HIF1A-201ENST00000323441 CYP4F22Q6NT55 531 aa4.38□□□□□ -1.71
HIF1A-201ENST00000323441 PUS7Q96PZ0 661 aaKnown RBP4.38□□□□□ -1.71
HIF1A-201ENST00000323441 AOC2O75106 756 aa4.38□□□□□ -1.71
HIF1A-201ENST00000323441 NME9Q86XW9 330 aa4.38□□□□□ -1.71
HIF1A-201ENST00000323441 HPS5Q9UPZ3 1129 aa4.38□□□□□ -1.71
HIF1A-201ENST00000323441 HACL1Q9UJ83 578 aa4.38□□□□□ -1.71
HIF1A-201ENST00000323441 ZNF541Q9H0D2 1346 aa4.38□□□□□ -1.71
HIF1A-201ENST00000323441 DDX60Q8IY21 1712 aaKnown RBP4.37□□□□□ -1.71
HIF1A-201ENST00000323441 LOC105371045A0A1W2PR82 267 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 EPHX2P34913 555 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 ERFEQ4G0M1 354 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 ASAP1Q9ULH1 1129 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 ATP6V1AP38606 617 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 MPRIPQ6WCQ1 1025 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 CTU1Q7Z7A3 348 aaKnown RBP4.37□□□□□ -1.71
HIF1A-201ENST00000323441 DCAF11Q8TEB1 546 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 CFHR5Q9BXR6 569 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 BCL2L12Q9HB09 334 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 PSME4Q14997 1843 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 HTTP42858 3142 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 SOS1Q07889 1333 aaPredicted RBP4.37□□□□□ -1.71
HIF1A-201ENST00000323441 INTS5Q6P9B9 1019 aaKnown RBP4.37□□□□□ -1.71
HIF1A-201ENST00000323441 TSKSQ9UJT2 592 aa4.37□□□□□ -1.71
HIF1A-201ENST00000323441 LRRC37AA6NMS7 1700 aa4.36□□□□□ -1.71
HIF1A-201ENST00000323441 KLRG2A4D1S0 409 aaPredicted RBP4.36□□□□□ -1.71
HIF1A-201ENST00000323441 BEGAINQ9BUH8 593 aa4.36□□□□□ -1.71
HIF1A-201ENST00000323441 ITGAEP38570 1179 aa4.36□□□□□ -1.71
HIF1A-201ENST00000323441 STYK1Q6J9G0 422 aa4.36□□□□□ -1.71
HIF1A-201ENST00000323441 GPC2Q8N158 579 aa4.36□□□□□ -1.71
HIF1A-201ENST00000323441 COL6A3P12111 3177 aa4.36□□□□□ -1.71
HIF1A-201ENST00000323441 RFC4P35249 363 aa4.35□□□□□ -1.71
HIF1A-201ENST00000323441 SOGA3Q5TF21 947 aa4.35□□□□□ -1.71
HIF1A-201ENST00000323441 ERVV-2B6SEH9 535 aa4.35□□□□□ -1.71
HIF1A-201ENST00000323441 TATP17735 454 aaPredicted RBP4.35□□□□□ -1.71
HIF1A-201ENST00000323441 MAP1SQ66K74 1059 aaPredicted RBP4.35□□□□□ -1.71
HIF1A-201ENST00000323441 SAMD1Q6SPF0 538 aaPredicted RBP4.35□□□□□ -1.71
HIF1A-201ENST00000323441 USP50Q70EL3 339 aaPredicted RBP4.35□□□□□ -1.71
HIF1A-201ENST00000323441 TAOK3Q9H2K8 898 aa4.35□□□□□ -1.71
HIF1A-201ENST00000323441 SRP68Q9UHB9 627 aaKnown RBP4.35□□□□□ -1.71
HIF1A-201ENST00000323441 ERBB4Q15303 1308 aa4.35□□□□□ -1.71
HIF1A-201ENST00000323441 ABT1Q9ULW3 272 aaKnown RBP4.35□□□□□ -1.71
HIF1A-201ENST00000323441 RIC1Q4ADV7 1423 aa4.35□□□□□ -1.71
HIF1A-201ENST00000323441 PHKG2P15735 406 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 SCNN1DP51172 638 aa4.34□□□□□ -1.71
HIF1A-201ENST00000323441 NOGQ13253 232 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms