RNA–Protein interactions for RNA: ENST00000321797.12

LMO7-201, Transcript of LIM domain 7, humanhuman

TSL 5 BASIC

Gene LMO7, Length 5,647 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-201ENST00000321797 DDX54Q8TDD1 881 aaKnown RBP11.37□□□□□ -0.59
LMO7-201ENST00000321797 ARFGAP3Q9NP61 516 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 CLASP1Q7Z460 1538 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 SNW1Q13573 536 aaKnown RBP11.37□□□□□ -0.59
LMO7-201ENST00000321797 MAPKBP1O60336 1514 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 CDCA7Q9BWT1 371 aaPredicted RBP11.37□□□□□ -0.59
LMO7-201ENST00000321797 USP21Q9UK80 565 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
LMO7-201ENST00000321797 FRMD3A2A2Y4 597 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 FOSBP53539 338 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 OTUD6BQ8N6M0 293 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 SLC24A3Q9HC58 644 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 SSBP05455 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
LMO7-201ENST00000321797 CAMK4Q16566 473 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 CCDC183Q5T5S1 534 aa11.37□□□□□ -0.59
LMO7-201ENST00000321797 C16orf71Q8IYS4 520 aaPredicted RBP11.37□□□□□ -0.59
LMO7-201ENST00000321797 PCMTD1Q96MG8 357 aaPredicted RBP11.37□□□□□ -0.59
LMO7-201ENST00000321797 UVSSAQ2YD98 709 aa11.36□□□□□ -0.59
LMO7-201ENST00000321797 DZIP1LQ8IYY4 767 aaKnown RBP11.36□□□□□ -0.59
LMO7-201ENST00000321797 STK32BQ9NY57 414 aa11.36□□□□□ -0.59
LMO7-201ENST00000321797 HSPA4P34932 840 aa11.36□□□□□ -0.59
LMO7-201ENST00000321797 NUDT16Q96DE0 195 aaKnown RBP11.36□□□□□ -0.59
LMO7-201ENST00000321797 DDX19BQ9UMR2 479 aa11.36□□□□□ -0.59
LMO7-201ENST00000321797 ERLIN2O94905 339 aa11.36□□□□□ -0.59
LMO7-201ENST00000321797 RNF168Q8IYW5 571 aaPredicted RBP11.36□□□□□ -0.59
LMO7-201ENST00000321797 RGS22Q8NE09 1264 aa11.36□□□□□ -0.59
LMO7-201ENST00000321797 NBPF11Q86T75 865 aa11.36□□□□□ -0.59
LMO7-201ENST00000321797 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
LMO7-201ENST00000321797 SYCP2Q9BX26 1530 aa11.36□□□□□ -0.59
LMO7-201ENST00000321797 DBN1Q16643 649 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 ARHGAP29Q52LW3 1261 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 TIAM1Q13009 1591 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 ERC1Q8IUD2 1116 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
LMO7-201ENST00000321797 NUP62CLQ9H1M0 184 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 ZSWIM4Q9H7M6 989 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 ZNF500O60304 480 aaPredicted RBP11.35□□□□□ -0.59
LMO7-201ENST00000321797 PHACTR2O75167 634 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 NEXNQ0ZGT2 675 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 SWAP70Q9UH65 585 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 PCF11O94913 1555 aaKnown RBP11.35□□□□□ -0.59
LMO7-201ENST00000321797 SERPINC1P01008 464 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 CFAP45Q9UL16 551 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 ITSN2Q9NZM3 1697 aa11.35□□□□□ -0.59
LMO7-201ENST00000321797 APAF1O14727 1248 aa11.34□□□□□ -0.59
LMO7-201ENST00000321797 CALR3Q96L12 384 aaKnown RBP11.34□□□□□ -0.59
LMO7-201ENST00000321797 RBSNQ9H1K0 784 aa11.34□□□□□ -0.59
LMO7-201ENST00000321797 SUFUQ9UMX1 484 aa11.34□□□□□ -0.59
LMO7-201ENST00000321797 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
LMO7-201ENST00000321797 WDR33Q9C0J8 1336 aaKnown RBP11.34□□□□□ -0.59
LMO7-201ENST00000321797 ATP2B3Q16720 1220 aa11.34□□□□□ -0.59
LMO7-201ENST00000321797 CCDC7Q96M83 1385 aa11.34□□□□□ -0.59
LMO7-201ENST00000321797 NUCKS1Q9H1E3 243 aaKnown RBP11.34□□□□□ -0.59
LMO7-201ENST00000321797 HNRNPH2P55795 449 aaKnown RBP11.33□□□□□ -0.6
LMO7-201ENST00000321797 C8orf34Q49A92 452 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 HOOK1Q9UJC3 728 aaKnown RBP11.33□□□□□ -0.6
LMO7-201ENST00000321797 MRFAP1Q9Y605 127 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 KINO60870 393 aaKnown RBP11.33□□□□□ -0.6
LMO7-201ENST00000321797 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
LMO7-201ENST00000321797 C20orf194Q5TEA3 1177 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 CCDC181Q5TID7 509 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 TAX1BP1Q86VP1 789 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 RRP15Q9Y3B9 282 aaKnown RBP11.33□□□□□ -0.6
LMO7-201ENST00000321797 CCDC171Q6TFL3 1326 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 SATB1Q01826 763 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 MAP3K11Q16584 847 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 OLFM4Q6UX06 510 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 CCDC186Q7Z3E2 898 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 PIBF1Q8WXW3 757 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 NCAPGQ9BPX3 1015 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 KIF1CO43896 1103 aaKnown RBP11.33□□□□□ -0.6
LMO7-201ENST00000321797 MAP9Q49MG5 647 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 NGEFQ8N5V2 710 aa11.33□□□□□ -0.6
LMO7-201ENST00000321797 ELF2Q15723 593 aa11.32□□□□□ -0.6
LMO7-201ENST00000321797 TBC1D32Q96NH3 1257 aa11.32□□□□□ -0.6
LMO7-201ENST00000321797 CASTP20810 708 aaKnown RBP11.32□□□□□ -0.6
LMO7-201ENST00000321797 MSL1Q68DK7 614 aa11.32□□□□□ -0.6
LMO7-201ENST00000321797 INPP5BP32019 993 aa11.32□□□□□ -0.6
LMO7-201ENST00000321797 BCAR3O75815 825 aa11.32□□□□□ -0.6
LMO7-201ENST00000321797 VEZTQ9HBM0 779 aa11.32□□□□□ -0.6
LMO7-201ENST00000321797 CCDC114Q96M63 670 aa11.32□□□□□ -0.6
LMO7-201ENST00000321797 NLRP1Q9C000 1473 aa11.31□□□□□ -0.6
LMO7-201ENST00000321797 DNAJC21Q5F1R6 531 aaKnown RBP11.31□□□□□ -0.6
LMO7-201ENST00000321797 ATP7AQ04656 1500 aa11.31□□□□□ -0.6
LMO7-201ENST00000321797 CABP4P57796 275 aa11.31□□□□□ -0.6
LMO7-201ENST00000321797 QTRT2Q9H974 415 aaKnown RBP11.31□□□□□ -0.6
LMO7-201ENST00000321797 GDPD2Q9HCC8 539 aa11.31□□□□□ -0.6
LMO7-201ENST00000321797 ZNHIT6Q9NWK9 470 aaKnown RBP11.31□□□□□ -0.6
LMO7-201ENST00000321797 HYPKQ9NX55 129 aa11.31□□□□□ -0.6
LMO7-201ENST00000321797 NEMFO60524 1076 aa11.31□□□□□ -0.6
LMO7-201ENST00000321797 WDHD1O75717 1129 aaPredicted RBP11.31□□□□□ -0.6
LMO7-201ENST00000321797 OAS2P29728 719 aaKnown RBP11.31□□□□□ -0.6
LMO7-201ENST00000321797 SYT10Q6XYQ8 523 aa11.31□□□□□ -0.6
LMO7-201ENST00000321797 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
LMO7-201ENST00000321797 CEBPZQ03701 1054 aaKnown RBP11.3□□□□□ -0.6
LMO7-201ENST00000321797 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
LMO7-201ENST00000321797 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
LMO7-201ENST00000321797 CCDC196A0A1B0GTZ2 297 aa11.3□□□□□ -0.6
LMO7-201ENST00000321797 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms