RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 F13A1P00488 732 aa21.45■■□□□ 1.02
PRKCB-202ENST00000321728 GNAI3P08754 354 aa21.45■■□□□ 1.02
PRKCB-202ENST00000321728 GTPBP4Q9BZE4 634 aaKnown RBP21.45■■□□□ 1.02
PRKCB-202ENST00000321728 KCNF1Q9H3M0 494 aa21.45■■□□□ 1.02
PRKCB-202ENST00000321728 ATP8B2P98198 1209 aa21.45■■□□□ 1.02
PRKCB-202ENST00000321728 STK31Q9BXU1 1019 aa21.45■■□□□ 1.02
PRKCB-202ENST00000321728 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.45■■□□□ 1.02
PRKCB-202ENST00000321728 AP5Z1O43299 807 aa21.44■■□□□ 1.02
PRKCB-202ENST00000321728 AK2P54819 239 aa21.44■■□□□ 1.02
PRKCB-202ENST00000321728 PRR36Q9H6K5 1346 aa21.44■■□□□ 1.02
PRKCB-202ENST00000321728 NUTM1Q86Y26 1132 aa21.43■■□□□ 1.02
PRKCB-202ENST00000321728 FUCA2Q9BTY2 467 aa21.43■■□□□ 1.02
PRKCB-202ENST00000321728 GOLGA6L6A8MZA4 724 aa21.43■■□□□ 1.02
PRKCB-202ENST00000321728 TPM3P06753 285 aa21.43■■□□□ 1.02
PRKCB-202ENST00000321728 LIMCH1Q9UPQ0 1083 aa21.43■■□□□ 1.02
PRKCB-202ENST00000321728 SNX14Q9Y5W7 946 aa21.43■■□□□ 1.02
PRKCB-202ENST00000321728 LRRFIP2Q9Y608 721 aaKnown RBP21.43■■□□□ 1.02
PRKCB-202ENST00000321728 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
PRKCB-202ENST00000321728 RTF1Q92541 710 aaKnown RBP21.42■■□□□ 1.02
PRKCB-202ENST00000321728 TUBGCP6Q96RT7 1819 aa21.42■■□□□ 1.02
PRKCB-202ENST00000321728 DTNBO60941 627 aa21.42■■□□□ 1.02
PRKCB-202ENST00000321728 DNM1Q05193 864 aaKnown RBP21.42■■□□□ 1.02
PRKCB-202ENST00000321728 FAM69CQ0P6D2 419 aa21.42■■□□□ 1.02
PRKCB-202ENST00000321728 RUFY3Q7L099 469 aa21.42■■□□□ 1.02
PRKCB-202ENST00000321728 CCDC61Q9Y6R9 512 aa21.42■■□□□ 1.02
PRKCB-202ENST00000321728 CRB1P82279 1406 aa21.41■■□□□ 1.02
PRKCB-202ENST00000321728 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
PRKCB-202ENST00000321728 U2AF2P26368 475 aaKnown RBP eCLIP21.41■■□□□ 1.022e-8■■■■□ 22.1
PRKCB-202ENST00000321728 RAD50Q92878 1312 aa21.41■■□□□ 1.02
PRKCB-202ENST00000321728 RASEFQ8IZ41 740 aa21.4■■□□□ 1.02
PRKCB-202ENST00000321728 TTC14Q96N46 770 aa21.4■■□□□ 1.02
PRKCB-202ENST00000321728 EPB41L2O43491 1005 aaKnown RBP21.4■■□□□ 1.02
PRKCB-202ENST00000321728 FLIIQ13045 1269 aa21.4■■□□□ 1.02
PRKCB-202ENST00000321728 CCDC192P0DO97 292 aa21.39■■□□□ 1.01
PRKCB-202ENST00000321728 CPA1P15085 419 aa21.39■■□□□ 1.01
PRKCB-202ENST00000321728 DLC1Q96QB1 1528 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 SGSM2O43147 1006 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 CCDC83Q8IWF9 413 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 TSPOAP1O95153 1857 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 AOX1Q06278 1338 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 GJB2P29033 226 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 ANKRD7Q92527 254 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 CHMP3Q9Y3E7 222 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
PRKCB-202ENST00000321728 A0A0U1RQG5 324 aaPredicted RBP21.37■■□□□ 1.01
PRKCB-202ENST00000321728 KIF20AO95235 890 aa21.37■■□□□ 1.01
PRKCB-202ENST00000321728 CASTP20810 708 aaKnown RBP21.37■■□□□ 1.01
PRKCB-202ENST00000321728 VPS37CA5D8V6 355 aaPredicted RBP21.37■■□□□ 1.01
PRKCB-202ENST00000321728 PTGS1P23219 599 aa21.37■■□□□ 1.01
PRKCB-202ENST00000321728 LARGE1O95461 756 aa21.36■■□□□ 1.01
PRKCB-202ENST00000321728 SPG7Q9UQ90 795 aa21.36■■□□□ 1.01
PRKCB-202ENST00000321728 CWC27Q6UX04 472 aaKnown RBP21.36■■□□□ 1.01
PRKCB-202ENST00000321728 SURF6O75683 361 aaKnown RBP21.35■■□□□ 1.01
PRKCB-202ENST00000321728 UBTFL1P0CB47 393 aaPredicted RBP21.35■■□□□ 1.01
PRKCB-202ENST00000321728 MTHFSDQ2M296 383 aaKnown RBP21.35■■□□□ 1.01
PRKCB-202ENST00000321728 LSG1Q9H089 658 aaKnown RBP21.35■■□□□ 1.01
PRKCB-202ENST00000321728 MTMR6Q9Y217 621 aa21.35■■□□□ 1.01
PRKCB-202ENST00000321728 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
PRKCB-202ENST00000321728 CTIFO43310 598 aaKnown RBP21.35■■□□□ 1.01
PRKCB-202ENST00000321728 IGSF3O75054 1194 aa21.35■■□□□ 1.01
PRKCB-202ENST00000321728 DRC7Q8IY82 874 aa21.34■■□□□ 1.01
PRKCB-202ENST00000321728 CAMK4Q16566 473 aa21.34■■□□□ 1.01
PRKCB-202ENST00000321728 CCDC30Q5VVM6 783 aa21.34■■□□□ 1.01
PRKCB-202ENST00000321728 ACEP12821 1306 aa21.34■■□□□ 1.01
PRKCB-202ENST00000321728 CNTROBQ8N137 903 aa21.33■■□□□ 1.01
PRKCB-202ENST00000321728 FAM200AQ8TCP9 573 aa21.33■■□□□ 1.01
PRKCB-202ENST00000321728 RIMS1Q86UR5 1692 aaKnown RBP21.33■■□□□ 1.01
PRKCB-202ENST00000321728 HYPKQ9NX55 129 aa21.33■■□□□ 1.01
PRKCB-202ENST00000321728 NRKQ7Z2Y5 1582 aa21.33■■□□□ 1
PRKCB-202ENST00000321728 NUTM2GQ5VZR2 741 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 PI4K2BQ8TCG2 481 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 USP44Q9H0E7 712 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 ARHGEF10O15013 1369 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 LUZP1Q86V48 1076 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 KLHL34Q8N239 644 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 C16orf45Q96MC5 204 aaPredicted RBP21.32■■□□□ 1
PRKCB-202ENST00000321728 TTC21BQ7Z4L5 1316 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 MAP3K11Q16584 847 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 CCDC186Q7Z3E2 898 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 PDRG1Q9NUG6 133 aa21.32■■□□□ 1
PRKCB-202ENST00000321728 MAP3K19Q56UN5 1328 aa21.31■■□□□ 1
PRKCB-202ENST00000321728 RHPN1Q8TCX5 695 aa21.31■■□□□ 1
PRKCB-202ENST00000321728 JAKMIP1Q96N16 626 aaKnown RBP21.31■■□□□ 1
PRKCB-202ENST00000321728 NUP62CLQ9H1M0 184 aa21.31■■□□□ 1
PRKCB-202ENST00000321728 PPP1R42Q7Z4L9 355 aa21.31■■□□□ 1
PRKCB-202ENST00000321728 MON2Q7Z3U7 1717 aa21.3■■□□□ 1
PRKCB-202ENST00000321728 RAB11FIP3O75154 756 aa21.3■■□□□ 1
PRKCB-202ENST00000321728 NCBP1Q09161 790 aaKnown RBP21.3■■□□□ 1
PRKCB-202ENST00000321728 LRMPQ12912 555 aa21.3■■□□□ 1
PRKCB-202ENST00000321728 SSH3Q8TE77 659 aa21.3■■□□□ 1
PRKCB-202ENST00000321728 FEZ1Q99689 392 aa21.3■■□□□ 1
PRKCB-202ENST00000321728 SETD1AO15047 1707 aaKnown RBP21.3■■□□□ 1
PRKCB-202ENST00000321728 ROBO2Q9HCK4 1378 aa21.3■■□□□ 1
PRKCB-202ENST00000321728 TYRO3Q06418 890 aa21.3■■□□□ 1
PRKCB-202ENST00000321728 FERMT3Q86UX7 667 aa21.29■■□□□ 1
PRKCB-202ENST00000321728 CKAP2LQ8IYA6 745 aa21.29■■□□□ 1
PRKCB-202ENST00000321728 MRVI1Q9Y6F6 885 aa21.29■■□□□ 1
PRKCB-202ENST00000321728 DDX54Q8TDD1 881 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms