RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 MX1P20591 662 aa25.31■■□□□ 1.64
CPNE7-202ENST00000319518 CCDC30Q5VVM6 783 aa25.31■■□□□ 1.64
CPNE7-202ENST00000319518 FKBP5Q13451 457 aaPredicted RBP25.31■■□□□ 1.64
CPNE7-202ENST00000319518 RBSNQ9H1K0 784 aa25.31■■□□□ 1.64
CPNE7-202ENST00000319518 PHRF1Q9P1Y6 1649 aaKnown RBP25.3■■□□□ 1.64
CPNE7-202ENST00000319518 ATP8B2P98198 1209 aa25.3■■□□□ 1.64
CPNE7-202ENST00000319518 NSFL1CQ9UNZ2 370 aaKnown RBP25.3■■□□□ 1.64
CPNE7-202ENST00000319518 CEMIPQ8WUJ3 1361 aa25.3■■□□□ 1.64
CPNE7-202ENST00000319518 MST1RQ04912 1400 aa25.29■■□□□ 1.64
CPNE7-202ENST00000319518 CHMLP26374 656 aa25.29■■□□□ 1.64
CPNE7-202ENST00000319518 PRIM1P49642 420 aaKnown RBP25.29■■□□□ 1.64
CPNE7-202ENST00000319518 UNC5CLQ8IV45 518 aa25.29■■□□□ 1.64
CPNE7-202ENST00000319518 PXDNQ92626 1479 aa25.29■■□□□ 1.64
CPNE7-202ENST00000319518 FOXD4L5Q5VV16 416 aaPredicted RBP25.27■■□□□ 1.64
CPNE7-202ENST00000319518 CABLES1Q8TDN4 633 aa25.27■■□□□ 1.64
CPNE7-202ENST00000319518 FOXD4L4Q8WXT5 416 aaPredicted RBP25.27■■□□□ 1.64
CPNE7-202ENST00000319518 LRRFIP2Q9Y608 721 aaKnown RBP25.27■■□□□ 1.64
CPNE7-202ENST00000319518 GNAI3P08754 354 aa25.27■■□□□ 1.64
CPNE7-202ENST00000319518 EIF2S2P20042 333 aaKnown RBP25.27■■□□□ 1.64
CPNE7-202ENST00000319518 IL25Q9H293 177 aa25.27■■□□□ 1.64
CPNE7-202ENST00000319518 TMEM63CQ9P1W3 806 aa25.27■■□□□ 1.64
CPNE7-202ENST00000319518 HDGFL1Q5TGJ6 251 aa25.26■■□□□ 1.63
CPNE7-202ENST00000319518 STAP2Q9UGK3 403 aa25.26■■□□□ 1.63
CPNE7-202ENST00000319518 RGPD5Q99666 1765 aa25.26■■□□□ 1.63
CPNE7-202ENST00000319518 CUL4AQ13619 759 aa25.26■■□□□ 1.63
CPNE7-202ENST00000319518 PLEKHO1Q53GL0 409 aaPredicted RBP25.26■■□□□ 1.63
CPNE7-202ENST00000319518 PHAXQ9H814 394 aaKnown RBP25.26■■□□□ 1.63
CPNE7-202ENST00000319518 KIF1AQ12756 1690 aa25.25■■□□□ 1.63
CPNE7-202ENST00000319518 USP44Q9H0E7 712 aa25.25■■□□□ 1.63
CPNE7-202ENST00000319518 MED1Q15648 1581 aaPredicted RBP25.25■■□□□ 1.63
CPNE7-202ENST00000319518 AKAP4Q5JQC9 854 aa25.25■■□□□ 1.63
CPNE7-202ENST00000319518 RILPL2Q969X0 211 aa25.25■■□□□ 1.63
CPNE7-202ENST00000319518 BRD1O95696 1058 aa25.24■■□□□ 1.63
CPNE7-202ENST00000319518 EIF4A1P60842 406 aaKnown RBP25.24■■□□□ 1.63
CPNE7-202ENST00000319518 ZSCAN30Q86W11 494 aa25.24■■□□□ 1.63
CPNE7-202ENST00000319518 ANO2Q9NQ90 1003 aa25.24■■□□□ 1.63
CPNE7-202ENST00000319518 BABAM1Q9NWV8 329 aa25.24■■□□□ 1.63
CPNE7-202ENST00000319518 TRIM6-TRIM34B2RNG4 842 aa25.23■■□□□ 1.63
CPNE7-202ENST00000319518 TEFQ10587 303 aa25.23■■□□□ 1.63
CPNE7-202ENST00000319518 UBE2Q2Q8WVN8 375 aa25.23■■□□□ 1.63
CPNE7-202ENST00000319518 N4BP2Q86UW6 1770 aaPredicted RBP25.22■■□□□ 1.63
CPNE7-202ENST00000319518 ALS2Q96Q42 1657 aa25.22■■□□□ 1.63
CPNE7-202ENST00000319518 BTBD11A6QL63 1104 aa25.22■■□□□ 1.63
CPNE7-202ENST00000319518 NOL8Q76FK4 1167 aaKnown RBP25.22■■□□□ 1.63
CPNE7-202ENST00000319518 ANP32BQ92688 251 aaKnown RBP25.22■■□□□ 1.63
CPNE7-202ENST00000319518 IL17RAQ96F46 866 aa25.22■■□□□ 1.63
CPNE7-202ENST00000319518 PDLIM2Q96JY6 352 aa25.22■■□□□ 1.63
CPNE7-202ENST00000319518 ANAPC15P60006 121 aa25.21■■□□□ 1.63
CPNE7-202ENST00000319518 C1orf141Q5JVX7 400 aa25.21■■□□□ 1.63
CPNE7-202ENST00000319518 ANXA1P04083 346 aa25.21■■□□□ 1.63
CPNE7-202ENST00000319518 ERBB3P21860 1342 aa25.21■■□□□ 1.63
CPNE7-202ENST00000319518 RNMTO43148 476 aaKnown RBP25.2■■□□□ 1.62
CPNE7-202ENST00000319518 MCM2P49736 904 aa25.2■■□□□ 1.62
CPNE7-202ENST00000319518 IL1RAPL2Q9NP60 686 aa25.2■■□□□ 1.62
CPNE7-202ENST00000319518 LMO7Q8WWI1 1683 aa25.2■■□□□ 1.62
CPNE7-202ENST00000319518 NCAPD2Q15021 1401 aa25.2■■□□□ 1.62
CPNE7-202ENST00000319518 AMOTQ4VCS5 1084 aa25.2■■□□□ 1.62
CPNE7-202ENST00000319518 UPF3BQ9BZI7 483 aaKnown RBP25.2■■□□□ 1.62
CPNE7-202ENST00000319518 SYCE3A1L190 88 aa25.19■■□□□ 1.62
CPNE7-202ENST00000319518 CACNA1FO60840 1977 aa25.19■■□□□ 1.62
CPNE7-202ENST00000319518 CHRNA2Q15822 529 aa25.18■■□□□ 1.62
CPNE7-202ENST00000319518 CHPF2Q9P2E5 772 aa25.18■■□□□ 1.62
CPNE7-202ENST00000319518 PXDNLA1KZ92 1463 aa25.18■■□□□ 1.62
CPNE7-202ENST00000319518 MCCP23508 829 aa25.18■■□□□ 1.62
CPNE7-202ENST00000319518 LRSAM1Q6UWE0 723 aa25.18■■□□□ 1.62
CPNE7-202ENST00000319518 SSH3Q8TE77 659 aa25.18■■□□□ 1.62
CPNE7-202ENST00000319518 SOS1Q07889 1333 aaPredicted RBP25.18■■□□□ 1.62
CPNE7-202ENST00000319518 INTS4Q96HW7 963 aaKnown RBP25.17■■□□□ 1.62
CPNE7-202ENST00000319518 SRCIN1Q9C0H9 1055 aa25.17■■□□□ 1.62
CPNE7-202ENST00000319518 NLRP2Q9NX02 1062 aa25.17■■□□□ 1.62
CPNE7-202ENST00000319518 KDM3BQ7LBC6 1761 aa25.16■■□□□ 1.62
CPNE7-202ENST00000319518 NUTM1Q86Y26 1132 aa25.16■■□□□ 1.62
CPNE7-202ENST00000319518 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.16■■□□□ 1.62
CPNE7-202ENST00000319518 UBTFL1P0CB47 393 aaPredicted RBP25.16■■□□□ 1.62
CPNE7-202ENST00000319518 CADPS2Q86UW7 1296 aa25.16■■□□□ 1.62
CPNE7-202ENST00000319518 PRAMEF22A3QJZ6 481 aa25.15■■□□□ 1.62
CPNE7-202ENST00000319518 AOX1Q06278 1338 aa25.15■■□□□ 1.62
CPNE7-202ENST00000319518 PPP1R42Q7Z4L9 355 aa25.14■■□□□ 1.61
CPNE7-202ENST00000319518 PI4K2BQ8TCG2 481 aa25.14■■□□□ 1.61
CPNE7-202ENST00000319518 MAP4K4O95819 1239 aaPredicted RBP25.13■■□□□ 1.61
CPNE7-202ENST00000319518 POLA2Q14181 598 aa25.13■■□□□ 1.61
CPNE7-202ENST00000319518 NPHP3Q7Z494 1330 aa25.13■■□□□ 1.61
CPNE7-202ENST00000319518 CAMTA1Q9Y6Y1 1673 aa25.13■■□□□ 1.61
CPNE7-202ENST00000319518 HSPA4P34932 840 aa25.13■■□□□ 1.61
CPNE7-202ENST00000319518 HS1BP3Q53T59 392 aa25.13■■□□□ 1.61
CPNE7-202ENST00000319518 DCCP43146 1447 aa25.13■■□□□ 1.61
CPNE7-202ENST00000319518 MBD3O95983 291 aa25.11■■□□□ 1.61
CPNE7-202ENST00000319518 NOL7Q9UMY1 257 aaKnown RBP25.11■■□□□ 1.61
CPNE7-202ENST00000319518 OFD1O75665 1012 aa25.11■■□□□ 1.61
CPNE7-202ENST00000319518 CSB-PGBD3P0DP91 1061 aa25.11■■□□□ 1.61
CPNE7-202ENST00000319518 MSNP26038 577 aaKnown RBP25.11■■□□□ 1.61
CPNE7-202ENST00000319518 SURF6O75683 361 aaKnown RBP25.1■■□□□ 1.61
CPNE7-202ENST00000319518 KIAA1211Q6ZU35 1233 aa25.1■■□□□ 1.61
CPNE7-202ENST00000319518 RHPN1Q8TCX5 695 aa25.1■■□□□ 1.61
CPNE7-202ENST00000319518 RAPGEF4Q8WZA2 1011 aa25.1■■□□□ 1.61
CPNE7-202ENST00000319518 NBPF7P0C2Y1 421 aaPredicted RBP25.1■■□□□ 1.61
CPNE7-202ENST00000319518 PROSER3Q2NL68 480 aa25.1■■□□□ 1.61
CPNE7-202ENST00000319518 FOXD4L6Q3SYB3 417 aaPredicted RBP25.1■■□□□ 1.61
CPNE7-202ENST00000319518 FOXD4L3Q6VB84 417 aaPredicted RBP25.1■■□□□ 1.61
CPNE7-202ENST00000319518 PI4KAP2A4QPH2 592 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms