RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
SYCN-201ENST00000318438 PASKQ96RG2 1323 aa18.38■□□□□ 0.53
SYCN-201ENST00000318438 ERFEQ4G0M1 354 aa18.37■□□□□ 0.53
SYCN-201ENST00000318438 USPL1Q5W0Q7 1092 aa18.37■□□□□ 0.53
SYCN-201ENST00000318438 ST20-MTHFSA0A0A6YYL1 179 aa18.36■□□□□ 0.53
SYCN-201ENST00000318438 CCDC88AQ3V6T2 1871 aa18.36■□□□□ 0.53
SYCN-201ENST00000318438 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
SYCN-201ENST00000318438 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
SYCN-201ENST00000318438 ZPR1O75312 459 aa18.35■□□□□ 0.53
SYCN-201ENST00000318438 DDNO94850 711 aaPredicted RBP18.35■□□□□ 0.53
SYCN-201ENST00000318438 NFIXQ14938 502 aa18.35■□□□□ 0.53
SYCN-201ENST00000318438 INTS5Q6P9B9 1019 aaKnown RBP18.35■□□□□ 0.53
SYCN-201ENST00000318438 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
SYCN-201ENST00000318438 TMEM88BA6NKF7 163 aa18.34■□□□□ 0.53
SYCN-201ENST00000318438 RGS19P49795 217 aa18.34■□□□□ 0.53
SYCN-201ENST00000318438 CABP4P57796 275 aa18.34■□□□□ 0.53
SYCN-201ENST00000318438 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
SYCN-201ENST00000318438 KIF20BQ96Q89 1820 aa18.34■□□□□ 0.53
SYCN-201ENST00000318438 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
SYCN-201ENST00000318438 CARMIL3Q8ND23 1372 aa18.33■□□□□ 0.53
SYCN-201ENST00000318438 DLEC1Q9Y238 1755 aa18.33■□□□□ 0.53
SYCN-201ENST00000318438 LDHDQ86WU2 507 aa18.32■□□□□ 0.52
SYCN-201ENST00000318438 VIRMAQ69YN4 1812 aaKnown RBP18.32■□□□□ 0.52
SYCN-201ENST00000318438 TNRC18O15417 2968 aaPredicted RBP18.31■□□□□ 0.52
SYCN-201ENST00000318438 AFDNP55196 1824 aaKnown RBP18.31■□□□□ 0.52
SYCN-201ENST00000318438 H0YIN7 160 aa18.31■□□□□ 0.52
SYCN-201ENST00000318438 C21orf2O43822 256 aa18.31■□□□□ 0.52
SYCN-201ENST00000318438 SERPINB2P05120 415 aa18.31■□□□□ 0.52
SYCN-201ENST00000318438 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
SYCN-201ENST00000318438 TJP1Q07157 1748 aa18.31■□□□□ 0.52
SYCN-201ENST00000318438 NRXN2Q9P2S2 1712 aa18.3■□□□□ 0.52
SYCN-201ENST00000318438 ITGBL1O95965 494 aaPredicted RBP18.3■□□□□ 0.52
SYCN-201ENST00000318438 TAF1DQ9H5J8 278 aaPredicted RBP18.29■□□□□ 0.52
SYCN-201ENST00000318438 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
SYCN-201ENST00000318438 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
SYCN-201ENST00000318438 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
SYCN-201ENST00000318438 MAP2K1Q02750 393 aaPredicted RBP18.28■□□□□ 0.52
SYCN-201ENST00000318438 EIF4A2Q14240 407 aaKnown RBP18.28■□□□□ 0.52
SYCN-201ENST00000318438 DEFB115Q30KQ5 88 aa18.28■□□□□ 0.52
SYCN-201ENST00000318438 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
SYCN-201ENST00000318438 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
SYCN-201ENST00000318438 ZNF622Q969S3 477 aaKnown RBP eCLIP18.28■□□□□ 0.52
SYCN-201ENST00000318438 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.52
SYCN-201ENST00000318438 IQCA1LA6NCM1 817 aa18.27■□□□□ 0.52
SYCN-201ENST00000318438 RASSF10A6NK89 507 aa18.27■□□□□ 0.52
SYCN-201ENST00000318438 EAPPQ56P03 285 aaPredicted RBP18.27■□□□□ 0.52
SYCN-201ENST00000318438 DNAJC10Q8IXB1 793 aa18.27■□□□□ 0.52
SYCN-201ENST00000318438 CFAP44Q96MT7 982 aa18.27■□□□□ 0.52
SYCN-201ENST00000318438 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.52
SYCN-201ENST00000318438 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
SYCN-201ENST00000318438 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
SYCN-201ENST00000318438 TIMELESSQ9UNS1 1208 aa18.27■□□□□ 0.52
SYCN-201ENST00000318438 TAOK3Q9H2K8 898 aa18.26■□□□□ 0.51
SYCN-201ENST00000318438 DICER1Q9UPY3 1922 aaKnown RBP18.25■□□□□ 0.51
SYCN-201ENST00000318438 MTHFSP49914 203 aa18.25■□□□□ 0.51
SYCN-201ENST00000318438 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
SYCN-201ENST00000318438 POLKQ9UBT6 870 aa18.25■□□□□ 0.51
SYCN-201ENST00000318438 COL15A1P39059 1388 aa18.25■□□□□ 0.51
SYCN-201ENST00000318438 LTBP3Q9NS15 1303 aa18.24■□□□□ 0.51
SYCN-201ENST00000318438 BICDL1Q6ZP65 573 aa18.24■□□□□ 0.51
SYCN-201ENST00000318438 L3MBTL3Q96JM7 780 aaPredicted RBP18.24■□□□□ 0.51
SYCN-201ENST00000318438 CLEC11AQ9Y240 323 aa18.24■□□□□ 0.51
SYCN-201ENST00000318438 FER1L6Q2WGJ9 1857 aa18.23■□□□□ 0.51
SYCN-201ENST00000318438 CCDC24Q8N4L8 307 aa18.23■□□□□ 0.51
SYCN-201ENST00000318438 ABT1Q9ULW3 272 aaKnown RBP18.23■□□□□ 0.51
SYCN-201ENST00000318438 MAP1SQ66K74 1059 aaPredicted RBP18.22■□□□□ 0.51
SYCN-201ENST00000318438 TSKSQ9UJT2 592 aa18.22■□□□□ 0.51
SYCN-201ENST00000318438 ZBTB1Q9Y2K1 713 aa18.22■□□□□ 0.51
SYCN-201ENST00000318438 CYP19A1P11511 503 aaPredicted RBP18.21■□□□□ 0.51
SYCN-201ENST00000318438 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
SYCN-201ENST00000318438 CNTROBQ8N137 903 aa18.2■□□□□ 0.5
SYCN-201ENST00000318438 COL11A2P13942 1736 aaPredicted RBP18.2■□□□□ 0.5
SYCN-201ENST00000318438 ZNF541Q9H0D2 1346 aa18.2■□□□□ 0.5
SYCN-201ENST00000318438 GRM1Q13255 1194 aa18.19■□□□□ 0.5
SYCN-201ENST00000318438 AMOTQ4VCS5 1084 aa18.19■□□□□ 0.5
SYCN-201ENST00000318438 CCER1Q8TC90 406 aaPredicted RBP18.19■□□□□ 0.5
SYCN-201ENST00000318438 BEGAINQ9BUH8 593 aa18.19■□□□□ 0.5
SYCN-201ENST00000318438 HACL1Q9UJ83 578 aa18.19■□□□□ 0.5
SYCN-201ENST00000318438 SCN4AP35499 1836 aa18.19■□□□□ 0.5
SYCN-201ENST00000318438 ANKRD31Q8N7Z5 1873 aa18.18■□□□□ 0.5
SYCN-201ENST00000318438 EPHX2P34913 555 aa18.18■□□□□ 0.5
SYCN-201ENST00000318438 PDE6BP35913 854 aa18.18■□□□□ 0.5
SYCN-201ENST00000318438 TNNT2P45379 298 aaPredicted RBP18.18■□□□□ 0.5
SYCN-201ENST00000318438 PAXIP1Q6ZW49 1069 aaPredicted RBP18.18■□□□□ 0.5
SYCN-201ENST00000318438 BRIP1Q9BX63 1249 aa18.18■□□□□ 0.5
SYCN-201ENST00000318438 MCOLN1Q9GZU1 580 aa18.18■□□□□ 0.5
SYCN-201ENST00000318438 ADAMTSL1Q8N6G6 1762 aa18.17■□□□□ 0.5
SYCN-201ENST00000318438 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
SYCN-201ENST00000318438 PRR5LQ6MZQ0 368 aa18.17■□□□□ 0.5
SYCN-201ENST00000318438 PRPF40BQ6NWY9 871 aaKnown RBP18.17■□□□□ 0.5
SYCN-201ENST00000318438 AEBP1Q8IUX7 1158 aa18.17■□□□□ 0.5
SYCN-201ENST00000318438 CAPNS2Q96L46 248 aa18.17■□□□□ 0.5
SYCN-201ENST00000318438 THSD7BQ9C0I4 1608 aa18.16■□□□□ 0.5
SYCN-201ENST00000318438 CYP4F22Q6NT55 531 aa18.16■□□□□ 0.5
SYCN-201ENST00000318438 PDZRN3Q9UPQ7 1066 aa18.16■□□□□ 0.5
SYCN-201ENST00000318438 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
SYCN-201ENST00000318438 FMR1Q06787 632 aaKnown RBP eCLIP18.15■□□□□ 0.5
SYCN-201ENST00000318438 SLC39A6Q13433 755 aa18.15■□□□□ 0.5
SYCN-201ENST00000318438 GPR101Q96P66 508 aaPredicted RBP18.15■□□□□ 0.5
SYCN-201ENST00000318438 RNF123Q5XPI4 1314 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms