RNA–Protein interactions for RNA: ENST00000315732.2

LSM10-201, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM10, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-201ENST00000315732 ZBTB1Q9Y2K1 713 aa19.71■□□□□ 0.75
LSM10-201ENST00000315732 TJP1Q07157 1748 aa19.71■□□□□ 0.75
LSM10-201ENST00000315732 KCPQ6ZWJ8 1503 aa19.7■□□□□ 0.74
LSM10-201ENST00000315732 CANXP27824 592 aaKnown RBP19.69■□□□□ 0.74
LSM10-201ENST00000315732 PPP2R1AP30153 589 aa19.69■□□□□ 0.74
LSM10-201ENST00000315732 PRKAR2BP31323 418 aa19.69■□□□□ 0.74
LSM10-201ENST00000315732 PHACTR3Q96KR7 559 aa19.69■□□□□ 0.74
LSM10-201ENST00000315732 RSPH6AQ9H0K4 717 aa19.69■□□□□ 0.74
LSM10-201ENST00000315732 KIF13BQ9NQT8 1826 aa19.69■□□□□ 0.74
LSM10-201ENST00000315732 ADAMTS7Q9UKP4 1686 aa19.68■□□□□ 0.74
LSM10-201ENST00000315732 DALRD3Q5D0E6 543 aaKnown RBP19.68■□□□□ 0.74
LSM10-201ENST00000315732 ZNF496Q96IT1 587 aaPredicted RBP19.68■□□□□ 0.74
LSM10-201ENST00000315732 COL15A1P39059 1388 aa19.68■□□□□ 0.74
LSM10-201ENST00000315732 A0A087WZG4 1122 aa19.67■□□□□ 0.74
LSM10-201ENST00000315732 U2AF1L5P0DN76 240 aaPredicted RBP19.67■□□□□ 0.74
LSM10-201ENST00000315732 EIF5P55010 431 aaKnown RBP19.67■□□□□ 0.74
LSM10-201ENST00000315732 U2AF1Q01081 240 aaKnown RBP eCLIP19.67■□□□□ 0.74
LSM10-201ENST00000315732 NFIXQ14938 502 aa19.67■□□□□ 0.74
LSM10-201ENST00000315732 FMNL2Q96PY5 1086 aa19.66■□□□□ 0.74
LSM10-201ENST00000315732 BCL2L12Q9HB09 334 aa19.66■□□□□ 0.74
LSM10-201ENST00000315732 BTBD11A6QL63 1104 aa19.65■□□□□ 0.74
LSM10-201ENST00000315732 CHRNA5P30532 468 aa19.65■□□□□ 0.74
LSM10-201ENST00000315732 CEMIPQ8WUJ3 1361 aa19.65■□□□□ 0.74
LSM10-201ENST00000315732 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
LSM10-201ENST00000315732 SERPINB2P05120 415 aa19.64■□□□□ 0.73
LSM10-201ENST00000315732 RTF1Q92541 710 aaKnown RBP19.64■□□□□ 0.73
LSM10-201ENST00000315732 KIAA1551Q9HCM1 1747 aa19.64■□□□□ 0.73
LSM10-201ENST00000315732 N4BP2Q86UW6 1770 aaPredicted RBP19.64■□□□□ 0.73
LSM10-201ENST00000315732 CEP350Q5VT06 3117 aa19.63■□□□□ 0.73
LSM10-201ENST00000315732 IL6STP40189 918 aaPredicted RBP19.62■□□□□ 0.73
LSM10-201ENST00000315732 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
LSM10-201ENST00000315732 KIF3CO14782 793 aa19.61■□□□□ 0.73
LSM10-201ENST00000315732 KCNQ3O43525 872 aa19.6■□□□□ 0.73
LSM10-201ENST00000315732 HTATSF1O43719 755 aaKnown RBP19.6■□□□□ 0.73
LSM10-201ENST00000315732 A1BGP04217 495 aa19.6■□□□□ 0.73
LSM10-201ENST00000315732 C9orf131Q5VYM1 1079 aa19.6■□□□□ 0.73
LSM10-201ENST00000315732 BICDL1Q6ZP65 573 aa19.6■□□□□ 0.73
LSM10-201ENST00000315732 ZNF330Q9Y3S2 320 aaPredicted RBP19.6■□□□□ 0.73
LSM10-201ENST00000315732 MCM10Q7L590 875 aa19.59■□□□□ 0.73
LSM10-201ENST00000315732 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
LSM10-201ENST00000315732 UBR2Q8IWV8 1755 aa19.58■□□□□ 0.73
LSM10-201ENST00000315732 HSPA6P17066 643 aa19.58■□□□□ 0.72
LSM10-201ENST00000315732 TBC1D9BQ66K14 1250 aa19.58■□□□□ 0.72
LSM10-201ENST00000315732 H0YIN7 160 aa19.57■□□□□ 0.72
LSM10-201ENST00000315732 TTLL6Q8N841 843 aa19.57■□□□□ 0.72
LSM10-201ENST00000315732 USP16Q9Y5T5 823 aa19.57■□□□□ 0.72
LSM10-201ENST00000315732 NEFMP07197 916 aa19.56■□□□□ 0.72
LSM10-201ENST00000315732 SNRPA1P09661 255 aaKnown RBP19.56■□□□□ 0.72
LSM10-201ENST00000315732 C2CD5Q86YS7 1000 aa19.56■□□□□ 0.72
LSM10-201ENST00000315732 PDZRN3Q9UPQ7 1066 aa19.56■□□□□ 0.72
LSM10-201ENST00000315732 VIRMAQ69YN4 1812 aaKnown RBP19.55■□□□□ 0.72
LSM10-201ENST00000315732 DCTN1Q14203 1278 aa19.55■□□□□ 0.72
LSM10-201ENST00000315732 SETDB2Q96T68 719 aa19.55■□□□□ 0.72
LSM10-201ENST00000315732 BRIP1Q9BX63 1249 aa19.55■□□□□ 0.72
LSM10-201ENST00000315732 RNF181Q9P0P0 153 aa19.55■□□□□ 0.72
LSM10-201ENST00000315732 TOMM70O94826 608 aa19.54■□□□□ 0.72
LSM10-201ENST00000315732 PDE6BP35913 854 aa19.54■□□□□ 0.72
LSM10-201ENST00000315732 TAF7Q15545 349 aaPredicted RBP19.54■□□□□ 0.72
LSM10-201ENST00000315732 BRCA1P38398 1863 aaKnown RBP19.54■□□□□ 0.72
LSM10-201ENST00000315732 CAMTA2O94983 1202 aa19.53■□□□□ 0.72
LSM10-201ENST00000315732 DZIP3Q86Y13 1208 aaKnown RBP19.53■□□□□ 0.72
LSM10-201ENST00000315732 NMRK2Q9NPI5 230 aa19.53■□□□□ 0.72
LSM10-201ENST00000315732 PRAMEF22A3QJZ6 481 aa19.52■□□□□ 0.72
LSM10-201ENST00000315732 PRR5LQ6MZQ0 368 aa19.52■□□□□ 0.72
LSM10-201ENST00000315732 CLEC4GQ6UXB4 293 aa19.52■□□□□ 0.72
LSM10-201ENST00000315732 CARMIL3Q8ND23 1372 aa19.52■□□□□ 0.72
LSM10-201ENST00000315732 SIPA1L3O60292 1781 aaPredicted RBP19.52■□□□□ 0.71
LSM10-201ENST00000315732 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
LSM10-201ENST00000315732 PNNQ9H307 717 aaKnown RBP19.51■□□□□ 0.71
LSM10-201ENST00000315732 ARFGEF1Q9Y6D6 1849 aa19.51■□□□□ 0.71
LSM10-201ENST00000315732 NRXN2Q9P2S2 1712 aa19.51■□□□□ 0.71
LSM10-201ENST00000315732 NPHP1O15259 732 aa19.5■□□□□ 0.71
LSM10-201ENST00000315732 PNISRQ8TF01 805 aaKnown RBP19.5■□□□□ 0.71
LSM10-201ENST00000315732 ZNF622Q969S3 477 aaKnown RBP eCLIP19.5■□□□□ 0.71
LSM10-201ENST00000315732 LMNB1P20700 586 aa19.49■□□□□ 0.71
LSM10-201ENST00000315732 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
LSM10-201ENST00000315732 C16orf71Q8IYS4 520 aaPredicted RBP19.49■□□□□ 0.71
LSM10-201ENST00000315732 CNBD1Q8NA66 436 aa19.49■□□□□ 0.71
LSM10-201ENST00000315732 PLEKHF1Q96S99 279 aa19.49■□□□□ 0.71
LSM10-201ENST00000315732 ST5P78524 1137 aa19.48■□□□□ 0.71
LSM10-201ENST00000315732 RASSF7Q02833 373 aa19.48■□□□□ 0.71
LSM10-201ENST00000315732 CCDC24Q8N4L8 307 aa19.48■□□□□ 0.71
LSM10-201ENST00000315732 MIS18AQ9NYP9 233 aa19.48■□□□□ 0.71
LSM10-201ENST00000315732 ZNF652Q9Y2D9 606 aa19.48■□□□□ 0.71
LSM10-201ENST00000315732 AFDNP55196 1824 aaKnown RBP19.48■□□□□ 0.71
LSM10-201ENST00000315732 ZC3H4Q9UPT8 1303 aaKnown RBP19.48■□□□□ 0.71
LSM10-201ENST00000315732 RGL2O15211 777 aa19.47■□□□□ 0.71
LSM10-201ENST00000315732 RBM46Q8TBY0 533 aaKnown RBP19.47■□□□□ 0.71
LSM10-201ENST00000315732 RRAGCQ9HB90 399 aa19.47■□□□□ 0.71
LSM10-201ENST00000315732 NBPF26B4DH59 902 aa19.46■□□□□ 0.71
LSM10-201ENST00000315732 APLP1P51693 650 aa19.46■□□□□ 0.71
LSM10-201ENST00000315732 NFE2L2Q16236 605 aa19.46■□□□□ 0.71
LSM10-201ENST00000315732 NBPF10Q6P3W6 841 aaKnown RBP19.46■□□□□ 0.71
LSM10-201ENST00000315732 NBPF15Q8N660 670 aa19.46■□□□□ 0.71
LSM10-201ENST00000315732 NBPF5PQ86XG9 351 aaPredicted RBP19.45■□□□□ 0.7
LSM10-201ENST00000315732 CNKSR1Q969H4 720 aa19.45■□□□□ 0.7
LSM10-201ENST00000315732 NFKBIEO00221 500 aa19.44■□□□□ 0.7
LSM10-201ENST00000315732 C21orf2O43822 256 aa19.44■□□□□ 0.7
LSM10-201ENST00000315732 SRGNP10124 158 aa19.44■□□□□ 0.7
LSM10-201ENST00000315732 PRELPP51888 382 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms