RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 F6X3S4 739 aa18.29■□□□□ 0.52
CHFR-202ENST00000315585 TNPO1Q92973 898 aaKnown RBP18.29■□□□□ 0.52
CHFR-202ENST00000315585 PDE1AP54750 535 aa18.29■□□□□ 0.52
CHFR-202ENST00000315585 NUCB2P80303 420 aa18.29■□□□□ 0.52
CHFR-202ENST00000315585 WDR17Q8IZU2 1322 aa18.28■□□□□ 0.52
CHFR-202ENST00000315585 PHKG2P15735 406 aa18.28■□□□□ 0.52
CHFR-202ENST00000315585 APBB1O00213 710 aa18.27■□□□□ 0.52
CHFR-202ENST00000315585 CLEC17AQ6ZS10 378 aa18.27■□□□□ 0.52
CHFR-202ENST00000315585 MEGF6O75095 1541 aa18.27■□□□□ 0.52
CHFR-202ENST00000315585 SMARCA5O60264 1052 aaPredicted RBP18.27■□□□□ 0.51
CHFR-202ENST00000315585 MCCP23508 829 aa18.27■□□□□ 0.51
CHFR-202ENST00000315585 ABCA3Q99758 1704 aa18.26■□□□□ 0.51
CHFR-202ENST00000315585 DCAF5Q96JK2 942 aa18.26■□□□□ 0.51
CHFR-202ENST00000315585 HDAC5Q9UQL6 1122 aa18.26■□□□□ 0.51
CHFR-202ENST00000315585 FSD2A1L4K1 749 aa18.25■□□□□ 0.51
CHFR-202ENST00000315585 EPB41L2O43491 1005 aaKnown RBP18.25■□□□□ 0.51
CHFR-202ENST00000315585 UBTFL1P0CB47 393 aaPredicted RBP18.25■□□□□ 0.51
CHFR-202ENST00000315585 MCM2P49736 904 aa18.25■□□□□ 0.51
CHFR-202ENST00000315585 MRE11P49959 708 aa18.25■□□□□ 0.51
CHFR-202ENST00000315585 TOM1L2Q6ZVM7 507 aa18.25■□□□□ 0.51
CHFR-202ENST00000315585 AOX1Q06278 1338 aa18.25■□□□□ 0.51
CHFR-202ENST00000315585 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
CHFR-202ENST00000315585 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
CHFR-202ENST00000315585 RAB11FIP3O75154 756 aa18.25■□□□□ 0.51
CHFR-202ENST00000315585 NECTIN2Q92692 538 aa18.25■□□□□ 0.51
CHFR-202ENST00000315585 SCN11AQ9UI33 1791 aa18.25■□□□□ 0.51
CHFR-202ENST00000315585 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
CHFR-202ENST00000315585 SLC52A2Q9HAB3 445 aa18.24■□□□□ 0.51
CHFR-202ENST00000315585 PARP4Q9UKK3 1724 aaKnown RBP18.24■□□□□ 0.51
CHFR-202ENST00000315585 EIF2S2P20042 333 aaKnown RBP18.24■□□□□ 0.51
CHFR-202ENST00000315585 MX1P20591 662 aa18.24■□□□□ 0.51
CHFR-202ENST00000315585 COL5A2P05997 1499 aaPredicted RBP18.24■□□□□ 0.51
CHFR-202ENST00000315585 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
CHFR-202ENST00000315585 IBTKQ9P2D0 1353 aaPredicted RBP18.23■□□□□ 0.51
CHFR-202ENST00000315585 DBF4Q9UBU7 674 aaPredicted RBP18.23■□□□□ 0.51
CHFR-202ENST00000315585 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
CHFR-202ENST00000315585 STAP2Q9UGK3 403 aa18.23■□□□□ 0.51
CHFR-202ENST00000315585 HEG1Q9ULI3 1381 aa18.22■□□□□ 0.51
CHFR-202ENST00000315585 CD2BP2O95400 341 aaKnown RBP18.22■□□□□ 0.51
CHFR-202ENST00000315585 EVA1CP58658 441 aa18.22■□□□□ 0.51
CHFR-202ENST00000315585 HSP90AB4PQ58FF6 505 aa18.22■□□□□ 0.51
CHFR-202ENST00000315585 CARD10Q9BWT7 1032 aa18.22■□□□□ 0.51
CHFR-202ENST00000315585 KCNQ3O43525 872 aa18.22■□□□□ 0.51
CHFR-202ENST00000315585 GIGYF1O75420 1035 aaPredicted RBP18.22■□□□□ 0.51
CHFR-202ENST00000315585 EXOC6BQ9Y2D4 811 aa18.22■□□□□ 0.51
CHFR-202ENST00000315585 N4BP2Q86UW6 1770 aaPredicted RBP18.21■□□□□ 0.51
CHFR-202ENST00000315585 KDM6AO15550 1401 aaPredicted RBP18.21■□□□□ 0.51
CHFR-202ENST00000315585 PCDH11XQ9BZA7 1347 aa18.21■□□□□ 0.51
CHFR-202ENST00000315585 PCDH11YQ9BZA8 1340 aa18.21■□□□□ 0.51
CHFR-202ENST00000315585 ANAPC15P60006 121 aa18.21■□□□□ 0.51
CHFR-202ENST00000315585 GZF1Q9H116 711 aaPredicted RBP18.21■□□□□ 0.51
CHFR-202ENST00000315585 USP44Q9H0E7 712 aa18.2■□□□□ 0.5
CHFR-202ENST00000315585 LRRFIP2Q9Y608 721 aaKnown RBP18.2■□□□□ 0.5
CHFR-202ENST00000315585 SALL3Q9BXA9 1300 aa18.2■□□□□ 0.5
CHFR-202ENST00000315585 MRC1P22897 1456 aa18.2■□□□□ 0.5
CHFR-202ENST00000315585 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
CHFR-202ENST00000315585 SSH3Q8TE77 659 aa18.2■□□□□ 0.5
CHFR-202ENST00000315585 CHPF2Q9P2E5 772 aa18.2■□□□□ 0.5
CHFR-202ENST00000315585 AHDC1Q5TGY3 1603 aaPredicted RBP18.2■□□□□ 0.5
CHFR-202ENST00000315585 IL2RBP14784 551 aa18.19■□□□□ 0.5
CHFR-202ENST00000315585 ZCRB1Q8TBF4 217 aaKnown RBP18.19■□□□□ 0.5
CHFR-202ENST00000315585 CYP27B1O15528 508 aa18.19■□□□□ 0.5
CHFR-202ENST00000315585 TTC5Q8N0Z6 440 aa18.19■□□□□ 0.5
CHFR-202ENST00000315585 HYPKQ9NX55 129 aa18.19■□□□□ 0.5
CHFR-202ENST00000315585 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
CHFR-202ENST00000315585 PNMA6EA0A0J9YXQ4 647 aa18.18■□□□□ 0.5
CHFR-202ENST00000315585 CABP4P57796 275 aa18.18■□□□□ 0.5
CHFR-202ENST00000315585 NFATC2IPQ8NCF5 419 aa18.18■□□□□ 0.5
CHFR-202ENST00000315585 ESYT1Q9BSJ8 1104 aa18.18■□□□□ 0.5
CHFR-202ENST00000315585 PHAXQ9H814 394 aaKnown RBP18.18■□□□□ 0.5
CHFR-202ENST00000315585 XRCC6P12956 609 aaKnown RBP eCLIP18.17■□□□□ 0.56e-7■■■■■ 28.8
CHFR-202ENST00000315585 FOXD4L1Q9NU39 408 aa18.17■□□□□ 0.5
CHFR-202ENST00000315585 LTBP4Q8N2S1 1624 aa18.17■□□□□ 0.5
CHFR-202ENST00000315585 TRIM6-TRIM34B2RNG4 842 aa18.17■□□□□ 0.5
CHFR-202ENST00000315585 DNAAF4Q8WXU2 420 aa18.16■□□□□ 0.5
CHFR-202ENST00000315585 KIF1BPQ96EK5 621 aa18.16■□□□□ 0.5
CHFR-202ENST00000315585 RTN4Q9NQC3 1192 aaKnown RBP18.16■□□□□ 0.5
CHFR-202ENST00000315585 STRN4Q9NRL3 753 aa18.16■□□□□ 0.5
CHFR-202ENST00000315585 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
CHFR-202ENST00000315585 POLA2Q14181 598 aa18.15■□□□□ 0.5
CHFR-202ENST00000315585 BAG4O95429 457 aaKnown RBP18.14■□□□□ 0.5
CHFR-202ENST00000315585 KLHL40Q2TBA0 621 aa18.14■□□□□ 0.5
CHFR-202ENST00000315585 RILPL2Q969X0 211 aa18.14■□□□□ 0.5
CHFR-202ENST00000315585 GRPEL1Q9HAV7 217 aa18.14■□□□□ 0.5
CHFR-202ENST00000315585 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.5
CHFR-202ENST00000315585 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.49
CHFR-202ENST00000315585 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.49
CHFR-202ENST00000315585 SURF6O75683 361 aaKnown RBP18.14■□□□□ 0.49
CHFR-202ENST00000315585 CHMLP26374 656 aa18.14■□□□□ 0.49
CHFR-202ENST00000315585 SSFA2P28290 1259 aa18.14■□□□□ 0.49
CHFR-202ENST00000315585 FMNL2Q96PY5 1086 aa18.14■□□□□ 0.49
CHFR-202ENST00000315585 COL22A1Q8NFW1 1626 aaPredicted RBP18.14■□□□□ 0.49
CHFR-202ENST00000315585 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
CHFR-202ENST00000315585 LARP1Q6PKG0 1096 aaKnown RBP18.13■□□□□ 0.49
CHFR-202ENST00000315585 IL17RAQ96F46 866 aa18.13■□□□□ 0.49
CHFR-202ENST00000315585 NKX1-1Q15270 411 aaPredicted RBP18.13■□□□□ 0.49
CHFR-202ENST00000315585 PPP1R42Q7Z4L9 355 aa18.13■□□□□ 0.49
CHFR-202ENST00000315585 PI4KAP2A4QPH2 592 aa18.12■□□□□ 0.49
CHFR-202ENST00000315585 ALDH1L1O75891 902 aa18.12■□□□□ 0.49
CHFR-202ENST00000315585 PI4KAP1Q8N8J0 262 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1269.1 ms