RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
SPAST-201ENST00000315285 TRAPPC8Q9Y2L5 1435 aa16.15■□□□□ 0.18
SPAST-201ENST00000315285 CT47A1Q5JQC4 288 aaPredicted RBP16.15■□□□□ 0.18
SPAST-201ENST00000315285 A2MP01023 1474 aa16.14■□□□□ 0.17
SPAST-201ENST00000315285 CCDC66A2RUB6 948 aa16.14■□□□□ 0.17
SPAST-201ENST00000315285 PUS7Q96PZ0 661 aaKnown RBP16.14■□□□□ 0.17
SPAST-201ENST00000315285 ANO10Q9NW15 660 aa16.14■□□□□ 0.17
SPAST-201ENST00000315285 COL17A1Q9UMD9 1497 aaPredicted RBP16.14■□□□□ 0.17
SPAST-201ENST00000315285 A0A087WZG4 1122 aa16.14■□□□□ 0.17
SPAST-201ENST00000315285 GJB2P29033 226 aa16.14■□□□□ 0.17
SPAST-201ENST00000315285 TMX3Q96JJ7 454 aa16.14■□□□□ 0.17
SPAST-201ENST00000315285 PDE1AP54750 535 aa16.14■□□□□ 0.17
SPAST-201ENST00000315285 CFAP100Q494V2 611 aa16.14■□□□□ 0.17
SPAST-201ENST00000315285 CEBPAP49715 358 aaPredicted RBP16.13■□□□□ 0.17
SPAST-201ENST00000315285 C8orf76Q96K31 380 aa16.13■□□□□ 0.17
SPAST-201ENST00000315285 POLKQ9UBT6 870 aa16.13■□□□□ 0.17
SPAST-201ENST00000315285 IGHMBP2P38935 993 aaKnown RBP16.13■□□□□ 0.17
SPAST-201ENST00000315285 NOM1Q5C9Z4 860 aaKnown RBP16.13■□□□□ 0.17
SPAST-201ENST00000315285 CKAP2LQ8IYA6 745 aa16.13■□□□□ 0.17
SPAST-201ENST00000315285 RHPN1Q8TCX5 695 aa16.13■□□□□ 0.17
SPAST-201ENST00000315285 SNX21Q969T3 373 aa16.13■□□□□ 0.17
SPAST-201ENST00000315285 KRT18P05783 430 aaKnown RBP16.13■□□□□ 0.17
SPAST-201ENST00000315285 RBM27Q9P2N5 1060 aaKnown RBP16.13■□□□□ 0.17
SPAST-201ENST00000315285 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
SPAST-201ENST00000315285 UHRF1BP1Q6BDS2 1440 aa16.12■□□□□ 0.17
SPAST-201ENST00000315285 GUCY1B3Q02153 619 aa16.12■□□□□ 0.17
SPAST-201ENST00000315285 CWC15Q9P013 229 aaKnown RBP16.12■□□□□ 0.17
SPAST-201ENST00000315285 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
SPAST-201ENST00000315285 SFPQP23246 707 aaKnown RBP eCLIP16.12■□□□□ 0.17
SPAST-201ENST00000315285 DDX19AQ9NUU7 478 aaKnown RBP16.12■□□□□ 0.17
SPAST-201ENST00000315285 ABCF2Q9UG63 623 aa16.12■□□□□ 0.17
SPAST-201ENST00000315285 SOGA3Q5TF21 947 aa16.12■□□□□ 0.17
SPAST-201ENST00000315285 ANXA1P04083 346 aa16.11■□□□□ 0.17
SPAST-201ENST00000315285 IFIT5Q13325 482 aaKnown RBP16.11■□□□□ 0.17
SPAST-201ENST00000315285 SMC5Q8IY18 1101 aa16.11■□□□□ 0.17
SPAST-201ENST00000315285 VAMP4O75379 141 aa16.11■□□□□ 0.17
SPAST-201ENST00000315285 ZSCAN23Q3MJ62 389 aa16.11■□□□□ 0.17
SPAST-201ENST00000315285 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
SPAST-201ENST00000315285 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
SPAST-201ENST00000315285 TFIP11Q9UBB9 837 aaKnown RBP16.11■□□□□ 0.17
SPAST-201ENST00000315285 TEX14Q8IWB6 1497 aa16.11■□□□□ 0.17
SPAST-201ENST00000315285 PPIP5K1Q6PFW1 1433 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 CTAGE5O15320 804 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 ATP2B2Q01814 1243 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 CEP131Q9UPN4 1083 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 PDCL2Q8N4E4 241 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 UBE2HP62256 183 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 NAPBQ9H115 298 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 ESYT1Q9BSJ8 1104 aa16.1■□□□□ 0.17
SPAST-201ENST00000315285 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
SPAST-201ENST00000315285 DEF6Q9H4E7 631 aa16.09■□□□□ 0.17
SPAST-201ENST00000315285 C16orf71Q8IYS4 520 aaPredicted RBP16.09■□□□□ 0.17
SPAST-201ENST00000315285 ZNF213O14771 459 aa16.09■□□□□ 0.17
SPAST-201ENST00000315285 XRCC6P12956 609 aaKnown RBP eCLIP16.09■□□□□ 0.17
SPAST-201ENST00000315285 CCT2P78371 535 aaKnown RBP16.09■□□□□ 0.17
SPAST-201ENST00000315285 EIF4A2Q14240 407 aaKnown RBP16.09■□□□□ 0.17
SPAST-201ENST00000315285 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
SPAST-201ENST00000315285 TTC21AQ8NDW8 1320 aa16.09■□□□□ 0.17
SPAST-201ENST00000315285 SEC24BO95487 1268 aa16.09■□□□□ 0.17
SPAST-201ENST00000315285 PATL2C9JE40 543 aaKnown RBP16.08■□□□□ 0.17
SPAST-201ENST00000315285 ANAPC15P60006 121 aa16.08■□□□□ 0.17
SPAST-201ENST00000315285 UBE3BQ7Z3V4 1068 aa16.08■□□□□ 0.17
SPAST-201ENST00000315285 ZNF518AQ6AHZ1 1483 aa16.08■□□□□ 0.17
SPAST-201ENST00000315285 ERLIN1O75477 346 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 MCM5P33992 734 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 DCTPP1Q9H773 170 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 GOLIM4O00461 696 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 ADCY5O95622 1261 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 AXDND1Q5T1B0 1012 aaPredicted RBP16.08■□□□□ 0.16
SPAST-201ENST00000315285 LUC7LQ9NQ29 371 aaKnown RBP16.08■□□□□ 0.16
SPAST-201ENST00000315285 HMG20BQ9P0W2 317 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 ASXL2Q76L83 1435 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 GOLGA8BA8MQT2 603 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 UBXN4Q92575 508 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.16
SPAST-201ENST00000315285 ATP8B2P98198 1209 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 ODF2Q5BJF6 829 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 LEKR1Q6ZMV7 388 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 NEK1Q96PY6 1258 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 TANGO6Q9C0B7 1094 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 LRSAM1Q6UWE0 723 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 ZBTB3Q9H5J0 574 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
SPAST-201ENST00000315285 ZSCAN22P10073 491 aaPredicted RBP16.07■□□□□ 0.16
SPAST-201ENST00000315285 MINDY4BA8MYZ0 360 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 ATP5J2-PTCD1G3V325 749 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 MAP3K12Q12852 859 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 PHACTR3Q96KR7 559 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 ZHX3Q9H4I2 956 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 A0A1W2PP64 1363 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 NPC1L1Q9UHC9 1359 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 EPB41L2O43491 1005 aaKnown RBP16.06■□□□□ 0.16
SPAST-201ENST00000315285 IFNL2Q8IZJ0 200 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 UVSSAQ2YD98 709 aa16.06■□□□□ 0.16
SPAST-201ENST00000315285 ARHGAP29Q52LW3 1261 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms