RNA–Protein interactions for RNA: ENST00000315251.10

CHDH-201, Transcript of choline dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHDH, Length 7,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-201ENST00000315251 CNNM3Q8NE01 707 aa17.44■□□□□ 0.38
CHDH-201ENST00000315251 MCM3P25205 808 aa17.44■□□□□ 0.38
CHDH-201ENST00000315251 CTCFLQ8NI51 663 aaPredicted RBP17.44■□□□□ 0.38
CHDH-201ENST00000315251 CA8P35219 290 aa17.44■□□□□ 0.38
CHDH-201ENST00000315251 MMRN2Q9H8L6 949 aa17.44■□□□□ 0.38
CHDH-201ENST00000315251 CCT2P78371 535 aaKnown RBP17.44■□□□□ 0.38
CHDH-201ENST00000315251 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
CHDH-201ENST00000315251 FAM107BQ9H098 131 aa17.43■□□□□ 0.38
CHDH-201ENST00000315251 TAOK3Q9H2K8 898 aa17.43■□□□□ 0.38
CHDH-201ENST00000315251 BIN1O00499 593 aa17.43■□□□□ 0.38
CHDH-201ENST00000315251 MTIF2P46199 727 aaKnown RBP17.43■□□□□ 0.38
CHDH-201ENST00000315251 NLRP5P59047 1200 aa17.43■□□□□ 0.38
CHDH-201ENST00000315251 RAB34Q9BZG1 259 aa17.43■□□□□ 0.38
CHDH-201ENST00000315251 LMAN1P49257 510 aa17.43■□□□□ 0.38
CHDH-201ENST00000315251 CCDC183Q5T5S1 534 aa17.43■□□□□ 0.38
CHDH-201ENST00000315251 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
CHDH-201ENST00000315251 IFIT1P09914 478 aaKnown RBP17.42■□□□□ 0.38
CHDH-201ENST00000315251 FSD2A1L4K1 749 aa17.42■□□□□ 0.38
CHDH-201ENST00000315251 MAATS1Q7Z4T9 603 aa17.42■□□□□ 0.38
CHDH-201ENST00000315251 TMEM57Q8N5G2 664 aa17.42■□□□□ 0.38
CHDH-201ENST00000315251 ARL1P40616 181 aaPredicted RBP17.42■□□□□ 0.38
CHDH-201ENST00000315251 VAT1LQ9HCJ6 419 aa17.42■□□□□ 0.38
CHDH-201ENST00000315251 RRP9O43818 475 aaKnown RBP17.42■□□□□ 0.38
CHDH-201ENST00000315251 AKAP2Q9Y2D5 859 aa17.42■□□□□ 0.38
CHDH-201ENST00000315251 SAMM50Q9Y512 469 aa17.42■□□□□ 0.38
CHDH-201ENST00000315251 FERP16591 822 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 SSRP1Q08945 709 aaKnown RBP17.41■□□□□ 0.38
CHDH-201ENST00000315251 PABPN1LA6NDY0 278 aaKnown RBP17.41■□□□□ 0.38
CHDH-201ENST00000315251 PRC1O43663 620 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 IQCA1Q86XH1 822 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 SYCP3Q8IZU3 236 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 PLCD3Q8N3E9 789 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 KIF2AO00139 706 aaPredicted RBP17.41■□□□□ 0.38
CHDH-201ENST00000315251 WDHD1O75717 1129 aaPredicted RBP17.41■□□□□ 0.38
CHDH-201ENST00000315251 YEATS4O95619 227 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 ZSCAN30Q86W11 494 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 MICALCLQ6ZW33 695 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 PPP1R14CQ8TAE6 165 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 MYD88Q99836 296 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 SRRTQ9BXP5 876 aaKnown RBP17.41■□□□□ 0.38
CHDH-201ENST00000315251 ZNF652Q9Y2D9 606 aa17.41■□□□□ 0.38
CHDH-201ENST00000315251 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
CHDH-201ENST00000315251 PANK2Q9BZ23 570 aa17.4■□□□□ 0.38
CHDH-201ENST00000315251 ANKRD50Q9ULJ7 1429 aa17.4■□□□□ 0.38
CHDH-201ENST00000315251 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
CHDH-201ENST00000315251 ZNF213O14771 459 aa17.4■□□□□ 0.38
CHDH-201ENST00000315251 WDR63Q8IWG1 891 aa17.4■□□□□ 0.38
CHDH-201ENST00000315251 CCDC194A0A1B0GVG4 234 aa17.4■□□□□ 0.38
CHDH-201ENST00000315251 GTF2F1P35269 517 aaKnown RBP eCLIP17.4■□□□□ 0.38
CHDH-201ENST00000315251 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
CHDH-201ENST00000315251 MYO1BO43795 1136 aa17.4■□□□□ 0.38
CHDH-201ENST00000315251 ATP2C2O75185 946 aa17.39■□□□□ 0.38
CHDH-201ENST00000315251 ZSWIM4Q9H7M6 989 aa17.39■□□□□ 0.38
CHDH-201ENST00000315251 JADE2Q9NQC1 790 aa17.39■□□□□ 0.38
CHDH-201ENST00000315251 ANKRD18BA2A2Z9 1011 aa17.39■□□□□ 0.37
CHDH-201ENST00000315251 ZNF354CQ86Y25 554 aa17.39■□□□□ 0.37
CHDH-201ENST00000315251 ZNF692Q9BU19 519 aaPredicted RBP17.39■□□□□ 0.37
CHDH-201ENST00000315251 TMC6Q7Z403 805 aa17.39■□□□□ 0.37
CHDH-201ENST00000315251 ALS2CR12Q96Q35 445 aa17.39■□□□□ 0.37
CHDH-201ENST00000315251 MRPS9P82933 396 aaKnown RBP17.39■□□□□ 0.37
CHDH-201ENST00000315251 GOLGA8BA8MQT2 603 aa17.39■□□□□ 0.37
CHDH-201ENST00000315251 IFIT3O14879 490 aaKnown RBP17.39■□□□□ 0.37
CHDH-201ENST00000315251 CETN1Q12798 172 aa17.39■□□□□ 0.37
CHDH-201ENST00000315251 CCDC40Q4G0X9 1142 aa17.39■□□□□ 0.37
CHDH-201ENST00000315251 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
CHDH-201ENST00000315251 CUX1P39880 1505 aa17.39■□□□□ 0.37
CHDH-201ENST00000315251 PPFIA3O75145 1194 aa17.39■□□□□ 0.37
CHDH-201ENST00000315251 PAIP2Q9BPZ3 127 aaKnown RBP17.39■□□□□ 0.37
CHDH-201ENST00000315251 IDEP14735 1019 aa17.38■□□□□ 0.37
CHDH-201ENST00000315251 STAC3Q96MF2 364 aa17.38■□□□□ 0.37
CHDH-201ENST00000315251 TSNARE1Q96NA8 513 aa17.38■□□□□ 0.37
CHDH-201ENST00000315251 CCDC8Q9H0W5 538 aaPredicted RBP17.38■□□□□ 0.37
CHDH-201ENST00000315251 MX1P20591 662 aa17.38■□□□□ 0.37
CHDH-201ENST00000315251 MCM10Q7L590 875 aa17.38■□□□□ 0.37
CHDH-201ENST00000315251 AFAP1Q8N556 730 aa17.38■□□□□ 0.37
CHDH-201ENST00000315251 APBB1IPQ7Z5R6 666 aaPredicted RBP17.38■□□□□ 0.37
CHDH-201ENST00000315251 NAA15Q9BXJ9 866 aaKnown RBP17.38■□□□□ 0.37
CHDH-201ENST00000315251 MAP3K12Q12852 859 aa17.38■□□□□ 0.37
CHDH-201ENST00000315251 IKBKGQ9Y6K9 419 aa17.38■□□□□ 0.37
CHDH-201ENST00000315251 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
CHDH-201ENST00000315251 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
CHDH-201ENST00000315251 RAB11FIP3O75154 756 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 FSIP1Q8NA03 581 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 FEZ1Q99689 392 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 CGNQ9P2M7 1197 aaKnown RBP17.37■□□□□ 0.37
CHDH-201ENST00000315251 SSX2IPQ9Y2D8 614 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 RUSC2Q8N2Y8 1516 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
CHDH-201ENST00000315251 USP25Q9UHP3 1055 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 GLRX3O76003 335 aaKnown RBP17.37■□□□□ 0.37
CHDH-201ENST00000315251 CATIPQ7Z7H3 387 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 THUMPD2Q9BTF0 503 aaKnown RBP17.37■□□□□ 0.37
CHDH-201ENST00000315251 SPATA24Q86W54 205 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 RTEL1-TNFRSF6BF6WH68 1400 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 A0A1W2PRG0 241 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 GDPD2Q9HCC8 539 aa17.37■□□□□ 0.37
CHDH-201ENST00000315251 GIGYF2Q6Y7W6 1299 aaKnown RBP17.36■□□□□ 0.37
CHDH-201ENST00000315251 CALML4Q96GE6 196 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms