RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 ERCC4Q92889 916 aaPredicted RBP10.55□□□□□ -0.72
C2CD3-201ENST00000313663 C3P01024 1663 aa10.55□□□□□ -0.72
C2CD3-201ENST00000313663 SLIT1O75093 1534 aa10.55□□□□□ -0.72
C2CD3-201ENST00000313663 SETD1AO15047 1707 aaKnown RBP10.55□□□□□ -0.72
C2CD3-201ENST00000313663 NEFHP12036 1026 aa10.55□□□□□ -0.72
C2CD3-201ENST00000313663 CTNNA3Q9UI47 895 aa10.55□□□□□ -0.72
C2CD3-201ENST00000313663 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 GCC1Q96CN9 775 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 UBAC1Q9BSL1 405 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 MED14O60244 1454 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 ANKRD1Q15327 319 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 CPS1P31327 1500 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 BRPF1P55201 1214 aaPredicted RBP10.54□□□□□ -0.72
C2CD3-201ENST00000313663 RABEP1Q15276 862 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 NOL7Q9UMY1 257 aaKnown RBP10.54□□□□□ -0.72
C2CD3-201ENST00000313663 CYP46A1Q9Y6A2 500 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 STARD3NLO95772 234 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 TTLL5Q6EMB2 1281 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 SSBP05455 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
C2CD3-201ENST00000313663 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
C2CD3-201ENST00000313663 ZNF771Q7L3S4 317 aaPredicted RBP10.54□□□□□ -0.72
C2CD3-201ENST00000313663 PKNOX2Q96KN3 472 aa10.54□□□□□ -0.72
C2CD3-201ENST00000313663 CCDC191Q8NCU4 936 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 ZC3H6P61129 1189 aaKnown RBP10.53□□□□□ -0.72
C2CD3-201ENST00000313663 SIL1Q9H173 461 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 RAI14Q9P0K7 980 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 EDC4Q6P2E9 1401 aaKnown RBP10.53□□□□□ -0.72
C2CD3-201ENST00000313663 FIBPO43427 364 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 TDO2P48775 406 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 ZRSR2Q15696 482 aaKnown RBP10.53□□□□□ -0.72
C2CD3-201ENST00000313663 RNF214Q8ND24 703 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 LRP2BPQ9P2M1 347 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 PRKCSHP14314 528 aaPredicted RBP10.53□□□□□ -0.72
C2CD3-201ENST00000313663 DESP17661 470 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 NUP133Q8WUM0 1156 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
C2CD3-201ENST00000313663 DUSP27Q5VZP5 1158 aa10.53□□□□□ -0.72
C2CD3-201ENST00000313663 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.53□□□□□ -0.72
C2CD3-201ENST00000313663 NCKAP5LQ9HCH0 1330 aa10.52□□□□□ -0.72
C2CD3-201ENST00000313663 CCDC69A6NI79 296 aa10.52□□□□□ -0.72
C2CD3-201ENST00000313663 ZNF652Q9Y2D9 606 aa10.52□□□□□ -0.72
C2CD3-201ENST00000313663 CDKL5O76039 1030 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 SLFN5Q08AF3 891 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 RSPH6AQ9H0K4 717 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 LETM1O95202 739 aaPredicted RBP10.52□□□□□ -0.73
C2CD3-201ENST00000313663 SMC2O95347 1197 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 MYL6BP14649 208 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 PDE3AQ14432 1141 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 ZNF287Q9HBT7 754 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 ERLIN2O94905 339 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 TXLNBQ8N3L3 684 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 PRR36Q9H6K5 1346 aa10.52□□□□□ -0.73
C2CD3-201ENST00000313663 DHX8Q14562 1220 aaKnown RBP10.51□□□□□ -0.73
C2CD3-201ENST00000313663 FAM43AQ8N2R8 423 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 ABCF2Q9UG63 623 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 CPSF1Q10570 1443 aaKnown RBP10.51□□□□□ -0.73
C2CD3-201ENST00000313663 NME9Q86XW9 330 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 LRRCC1Q9C099 1032 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 BLOC1S2Q6QNY1 142 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 KCNH5Q8NCM2 988 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 SRGAP3O43295 1099 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 CCP110O43303 1012 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 ZNF76P36508 570 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 BICDL1Q6ZP65 573 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 FAM13BQ9NYF5 915 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 DEF6Q9H4E7 631 aa10.51□□□□□ -0.73
C2CD3-201ENST00000313663 ME1P48163 572 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 DACH1Q9UI36 760 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 PTPRUQ92729 1446 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 CT47B1P0C2W7 299 aaPredicted RBP10.5□□□□□ -0.73
C2CD3-201ENST00000313663 TRIM21P19474 475 aaKnown RBP10.5□□□□□ -0.73
C2CD3-201ENST00000313663 KNDC1Q76NI1 1749 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 TANGO6Q9C0B7 1094 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 IDH1O75874 414 aaKnown RBP10.5□□□□□ -0.73
C2CD3-201ENST00000313663 ANKRD18AQ8IVF6 992 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 KRT85P78386 507 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 NOM1Q5C9Z4 860 aaKnown RBP10.5□□□□□ -0.73
C2CD3-201ENST00000313663 ZNF428Q96B54 188 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 PIK3R4Q99570 1358 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 PTCH1Q13635 1447 aa10.5□□□□□ -0.73
C2CD3-201ENST00000313663 CEBPZQ03701 1054 aaKnown RBP10.49□□□□□ -0.73
C2CD3-201ENST00000313663 CEP170BQ9Y4F5 1589 aaPredicted RBP10.49□□□□□ -0.73
C2CD3-201ENST00000313663 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
C2CD3-201ENST00000313663 KCNA6P17658 529 aa10.49□□□□□ -0.73
C2CD3-201ENST00000313663 KRT32Q14532 448 aa10.49□□□□□ -0.73
C2CD3-201ENST00000313663 PPFIBP1Q86W92 1011 aa10.49□□□□□ -0.73
C2CD3-201ENST00000313663 H0YHG0 523 aa10.49□□□□□ -0.73
C2CD3-201ENST00000313663 PTCD1O75127 700 aaKnown RBP10.49□□□□□ -0.73
C2CD3-201ENST00000313663 ACEP12821 1306 aa10.49□□□□□ -0.73
C2CD3-201ENST00000313663 AEBP1Q8IUX7 1158 aa10.49□□□□□ -0.73
C2CD3-201ENST00000313663 STK11IPQ8N1F8 1099 aa10.49□□□□□ -0.73
C2CD3-201ENST00000313663 POLKQ9UBT6 870 aa10.49□□□□□ -0.73
C2CD3-201ENST00000313663 IFIT1P09914 478 aaKnown RBP10.49□□□□□ -0.73
C2CD3-201ENST00000313663 NASPP49321 788 aaPredicted RBP10.49□□□□□ -0.73
C2CD3-201ENST00000313663 NOB1Q9ULX3 412 aaKnown RBP10.49□□□□□ -0.73
C2CD3-201ENST00000313663 ZPR1O75312 459 aa10.48□□□□□ -0.73
C2CD3-201ENST00000313663 NEBLO76041 1014 aa10.48□□□□□ -0.73
C2CD3-201ENST00000313663 SERPINC1P01008 464 aa10.48□□□□□ -0.73
C2CD3-201ENST00000313663 CCDC181Q5TID7 509 aa10.48□□□□□ -0.73
C2CD3-201ENST00000313663 MRE11P49959 708 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms