RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 SOS2Q07890 1332 aaPredicted RBP7.31□□□□□ -1.24
SEC22A-201ENST00000309934 NPHP1O15259 732 aa7.31□□□□□ -1.24
SEC22A-201ENST00000309934 GSE1Q14687 1217 aa7.31□□□□□ -1.24
SEC22A-201ENST00000309934 CLASRPQ8N2M8 674 aaKnown RBP7.31□□□□□ -1.24
SEC22A-201ENST00000309934 FAM43AQ8N2R8 423 aa7.31□□□□□ -1.24
SEC22A-201ENST00000309934 IFIT2P09913 472 aaKnown RBP7.3□□□□□ -1.24
SEC22A-201ENST00000309934 SLC52A2Q9HAB3 445 aa7.3□□□□□ -1.24
SEC22A-201ENST00000309934 LRRCC1Q9C099 1032 aa7.3□□□□□ -1.24
SEC22A-201ENST00000309934 KSR2Q6VAB6 950 aa7.3□□□□□ -1.24
SEC22A-201ENST00000309934 CHD1LQ86WJ1 897 aa7.3□□□□□ -1.24
SEC22A-201ENST00000309934 DDX21Q9NR30 783 aaKnown RBP eCLIP7.3□□□□□ -1.24
SEC22A-201ENST00000309934 MED1Q15648 1581 aaPredicted RBP7.29□□□□□ -1.24
SEC22A-201ENST00000309934 SLIT3O75094 1523 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 MSH5O43196 834 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 L1TD1Q5T7N2 865 aaKnown RBP7.29□□□□□ -1.24
SEC22A-201ENST00000309934 NBPF6Q5VWK0 638 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 NBPF4Q96M43 638 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 ABCC4O15439 1325 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 GORABQ5T7V8 394 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 MPRIPQ6WCQ1 1025 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 KIF1BPQ96EK5 621 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 CLGNO14967 610 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 ST18O60284 1047 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 IPO9Q96P70 1041 aaKnown RBP7.29□□□□□ -1.24
SEC22A-201ENST00000309934 ZHX1Q9UKY1 873 aaPredicted RBP7.29□□□□□ -1.24
SEC22A-201ENST00000309934 PDZRN3Q9UPQ7 1066 aa7.29□□□□□ -1.24
SEC22A-201ENST00000309934 VGLL3A8MV65 326 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 PHKG2P15735 406 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 MCM2P49736 904 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 NALCNQ8IZF0 1738 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 CNTROBQ8N137 903 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 ANKRD44Q8N8A2 993 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 LINS1Q8NG48 757 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 ZNF335Q9H4Z2 1342 aaPredicted RBP7.28□□□□□ -1.24
SEC22A-201ENST00000309934 USHBP1Q8N6Y0 703 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 DDX54Q8TDD1 881 aaKnown RBP7.28□□□□□ -1.24
SEC22A-201ENST00000309934 RBM33Q96EV2 1170 aaKnown RBP7.28□□□□□ -1.24
SEC22A-201ENST00000309934 AOX1Q06278 1338 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 DDB1Q16531 1140 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 TICAM2Q86XR7 235 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 PXDNLA1KZ92 1463 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 KCNJ4P48050 445 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 DCTN1Q14203 1278 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 C8orf58Q8NAV2 365 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 NGLY1Q96IV0 654 aa7.28□□□□□ -1.24
SEC22A-201ENST00000309934 THUMPD2Q9BTF0 503 aaKnown RBP7.28□□□□□ -1.24
SEC22A-201ENST00000309934 SPATA31A6Q5VVP1 1343 aa7.27□□□□□ -1.24
SEC22A-201ENST00000309934 RNF20Q5VTR2 975 aa7.27□□□□□ -1.25
SEC22A-201ENST00000309934 ZNF592Q92610 1267 aa7.27□□□□□ -1.25
SEC22A-201ENST00000309934 ZBTB40Q9NUA8 1239 aa7.27□□□□□ -1.25
SEC22A-201ENST00000309934 AKAP2Q9Y2D5 859 aa7.27□□□□□ -1.25
SEC22A-201ENST00000309934 KIF3AQ9Y496 699 aa7.27□□□□□ -1.25
SEC22A-201ENST00000309934 RGS12O14924 1447 aa7.27□□□□□ -1.25
SEC22A-201ENST00000309934 CRB1P82279 1406 aa7.27□□□□□ -1.25
SEC22A-201ENST00000309934 EPB41L2O43491 1005 aaKnown RBP7.27□□□□□ -1.25
SEC22A-201ENST00000309934 CALRP27797 417 aaKnown RBP7.27□□□□□ -1.25
SEC22A-201ENST00000309934 EIF4A1P60842 406 aaKnown RBP7.27□□□□□ -1.25
SEC22A-201ENST00000309934 ZNF790Q6PG37 636 aa7.27□□□□□ -1.25
SEC22A-201ENST00000309934 FAM13BQ9NYF5 915 aa7.27□□□□□ -1.25
SEC22A-201ENST00000309934 FAM208AQ9UK61 1670 aaKnown RBP7.27□□□□□ -1.25
SEC22A-201ENST00000309934 GTF2E1P29083 439 aaPredicted RBP7.27□□□□□ -1.25
SEC22A-201ENST00000309934 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.27□□□□□ -1.25
SEC22A-201ENST00000309934 MAP2P11137 1827 aaKnown RBP7.27□□□□□ -1.25
SEC22A-201ENST00000309934 FAM83GA6ND36 823 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 SMC5Q8IY18 1101 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 DIAPH3Q9NSV4 1193 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 JCADQ9P266 1359 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 TRIM6-TRIM34B2RNG4 842 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 CHRNA2Q15822 529 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 BMP2KLQ5H9B9 411 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 ZSCAN25Q6NSZ9 544 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 RBM42Q9BTD8 480 aaKnown RBP7.26□□□□□ -1.25
SEC22A-201ENST00000309934 ATP10DQ9P241 1426 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 KDM4FA0A1W2PPD8 638 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 ATP8B2P98198 1209 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 SYTL4Q96C24 671 aaPredicted RBP7.26□□□□□ -1.25
SEC22A-201ENST00000309934 BACH2Q9BYV9 841 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 CHMP3Q9Y3E7 222 aa7.26□□□□□ -1.25
SEC22A-201ENST00000309934 NUTM2BA6NNL0 878 aaPredicted RBP7.25□□□□□ -1.25
SEC22A-201ENST00000309934 NUTM2EB1AL46 878 aaPredicted RBP7.25□□□□□ -1.25
SEC22A-201ENST00000309934 SURF6O75683 361 aaKnown RBP7.25□□□□□ -1.25
SEC22A-201ENST00000309934 NUCB1Q02818 461 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 ANKRD13DQ6ZTN6 518 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 NUTM2AQ8IVF1 878 aaPredicted RBP7.25□□□□□ -1.25
SEC22A-201ENST00000309934 CWC25Q9NXE8 425 aaPredicted RBP7.25□□□□□ -1.25
SEC22A-201ENST00000309934 BTG4Q9NY30 223 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 CLSTN1O94985 981 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 PLBD2Q8NHP8 589 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 SECISBP2LQ93073 1101 aaKnown RBP7.25□□□□□ -1.25
SEC22A-201ENST00000309934 MAP7D2Q96T17 732 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 CRYBG1Q9Y4K1 1723 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 GLRX3O76003 335 aaKnown RBP7.25□□□□□ -1.25
SEC22A-201ENST00000309934 TMEM132AQ24JP5 1023 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 ZKSCAN1P17029 563 aaPredicted RBP7.25□□□□□ -1.25
SEC22A-201ENST00000309934 FBLN1P23142 703 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 DCTPP1Q9H773 170 aa7.25□□□□□ -1.25
SEC22A-201ENST00000309934 ZNF330Q9Y3S2 320 aaPredicted RBP7.25□□□□□ -1.25
SEC22A-201ENST00000309934 ZBTB7BO15156 539 aaPredicted RBP7.24□□□□□ -1.25
SEC22A-201ENST00000309934 AIMP1Q12904 312 aaKnown RBP7.24□□□□□ -1.25
SEC22A-201ENST00000309934 PARP10Q53GL7 1025 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms