RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 RBM25P49756 843 aaKnown RBP29.83■■■□□ 2.37
RFWD2-201ENST00000308769 RTL5Q5HYW3 569 aaPredicted RBP29.83■■■□□ 2.37
RFWD2-201ENST00000308769 DCAF5Q96JK2 942 aa29.83■■■□□ 2.37
RFWD2-201ENST00000308769 COL5A2P05997 1499 aaPredicted RBP29.83■■■□□ 2.37
RFWD2-201ENST00000308769 MAP3K2Q9Y2U5 619 aa29.82■■■□□ 2.36
RFWD2-201ENST00000308769 IBTKQ9P2D0 1353 aaPredicted RBP29.82■■■□□ 2.36
RFWD2-201ENST00000308769 TOM1L2Q6ZVM7 507 aa29.8■■■□□ 2.36
RFWD2-201ENST00000308769 LRRCC1Q9C099 1032 aa29.8■■■□□ 2.36
RFWD2-201ENST00000308769 HYPKQ9NX55 129 aa29.8■■■□□ 2.36
RFWD2-201ENST00000308769 TUBGCP6Q96RT7 1819 aa29.79■■■□□ 2.36
RFWD2-201ENST00000308769 PDIA6Q15084 440 aa29.79■■■□□ 2.36
RFWD2-201ENST00000308769 DDX21Q9NR30 783 aaKnown RBP eCLIP29.79■■■□□ 2.36
RFWD2-201ENST00000308769 SDSP20132 328 aa29.78■■■□□ 2.36
RFWD2-201ENST00000308769 KSR2Q6VAB6 950 aa29.78■■■□□ 2.36
RFWD2-201ENST00000308769 SSH3Q8TE77 659 aa29.78■■■□□ 2.36
RFWD2-201ENST00000308769 ZNF496Q96IT1 587 aaPredicted RBP29.78■■■□□ 2.36
RFWD2-201ENST00000308769 PPP1R42Q7Z4L9 355 aa29.78■■■□□ 2.36
RFWD2-201ENST00000308769 PDE1AP54750 535 aa29.77■■■□□ 2.36
RFWD2-201ENST00000308769 HSP90AB1P08238 724 aaKnown RBP29.76■■■□□ 2.35
RFWD2-201ENST00000308769 SLKQ9H2G2 1235 aaPredicted RBP29.76■■■□□ 2.35
RFWD2-201ENST00000308769 OSBPL3Q9H4L5 887 aa29.76■■■□□ 2.35
RFWD2-201ENST00000308769 SALL3Q9BXA9 1300 aa29.76■■■□□ 2.35
RFWD2-201ENST00000308769 AIMP1Q12904 312 aaKnown RBP29.75■■■□□ 2.35
RFWD2-201ENST00000308769 POLA2Q14181 598 aa29.74■■■□□ 2.35
RFWD2-201ENST00000308769 TSHZ3Q63HK5 1081 aa29.74■■■□□ 2.35
RFWD2-201ENST00000308769 TTC5Q8N0Z6 440 aa29.74■■■□□ 2.35
RFWD2-201ENST00000308769 NFKBIBQ15653 356 aa29.74■■■□□ 2.35
RFWD2-201ENST00000308769 CWF19L2Q2TBE0 894 aaKnown RBP29.74■■■□□ 2.35
RFWD2-201ENST00000308769 SHANK3Q9BYB0 1731 aa29.73■■■□□ 2.35
RFWD2-201ENST00000308769 SRGAP3O43295 1099 aa29.73■■■□□ 2.35
RFWD2-201ENST00000308769 CABP4P57796 275 aa29.73■■■□□ 2.35
RFWD2-201ENST00000308769 GLI3P10071 1580 aa29.72■■■□□ 2.35
RFWD2-201ENST00000308769 ALDH1L1O75891 902 aa29.72■■■□□ 2.35
RFWD2-201ENST00000308769 MYL6BP14649 208 aa29.72■■■□□ 2.35
RFWD2-201ENST00000308769 STRN4Q9NRL3 753 aa29.72■■■□□ 2.35
RFWD2-201ENST00000308769 USP35Q9P2H5 1018 aa29.72■■■□□ 2.35
RFWD2-201ENST00000308769 PCDH11XQ9BZA7 1347 aa29.72■■■□□ 2.35
RFWD2-201ENST00000308769 PCDH11YQ9BZA8 1340 aa29.72■■■□□ 2.35
RFWD2-201ENST00000308769 KIF2CQ99661 725 aa29.71■■■□□ 2.35
RFWD2-201ENST00000308769 ZCRB1Q8TBF4 217 aaKnown RBP29.71■■■□□ 2.35
RFWD2-201ENST00000308769 SURF6O75683 361 aaKnown RBP29.7■■■□□ 2.35
RFWD2-201ENST00000308769 DDX58O95786 925 aaKnown RBP29.7■■■□□ 2.35
RFWD2-201ENST00000308769 MX1P20591 662 aa29.7■■■□□ 2.35
RFWD2-201ENST00000308769 C9orf78Q9NZ63 289 aaPredicted RBP29.7■■■□□ 2.35
RFWD2-201ENST00000308769 USP16Q9Y5T5 823 aa29.7■■■□□ 2.35
RFWD2-201ENST00000308769 LAMB4A4D0S4 1761 aa29.69■■■□□ 2.34
RFWD2-201ENST00000308769 SNRPA1P09661 255 aaKnown RBP29.69■■■□□ 2.34
RFWD2-201ENST00000308769 LARP1Q6PKG0 1096 aaKnown RBP29.69■■■□□ 2.34
RFWD2-201ENST00000308769 FMNL2Q96PY5 1086 aa29.69■■■□□ 2.34
RFWD2-201ENST00000308769 ANTXR1Q9H6X2 564 aa29.69■■■□□ 2.34
RFWD2-201ENST00000308769 IL1RAPL2Q9NP60 686 aa29.69■■■□□ 2.34
RFWD2-201ENST00000308769 CARD10Q9BWT7 1032 aa29.68■■■□□ 2.34
RFWD2-201ENST00000308769 SPRYD3Q8NCJ5 442 aa29.68■■■□□ 2.34
RFWD2-201ENST00000308769 PIP4K2AP48426 406 aaPredicted RBP29.67■■■□□ 2.34
RFWD2-201ENST00000308769 LINS1Q8NG48 757 aa29.67■■■□□ 2.34
RFWD2-201ENST00000308769 IL2RBP14784 551 aa29.66■■■□□ 2.34
RFWD2-201ENST00000308769 XAGE3Q8WTP9 111 aa29.66■■■□□ 2.34
RFWD2-201ENST00000308769 HSCBQ8IWL3 235 aa29.66■■■□□ 2.34
RFWD2-201ENST00000308769 CASC1Q6TDU7 716 aa29.65■■■□□ 2.34
RFWD2-201ENST00000308769 RIC3Q7Z5B4 369 aa29.65■■■□□ 2.34
RFWD2-201ENST00000308769 RAB11FIP3O75154 756 aa29.65■■■□□ 2.34
RFWD2-201ENST00000308769 COPS6Q7L5N1 327 aa29.65■■■□□ 2.34
RFWD2-201ENST00000308769 UBR2Q8IWV8 1755 aa29.64■■■□□ 2.34
RFWD2-201ENST00000308769 EVA1CP58658 441 aa29.64■■■□□ 2.34
RFWD2-201ENST00000308769 LRP10Q7Z4F1 713 aa29.64■■■□□ 2.34
RFWD2-201ENST00000308769 RHPN1Q8TCX5 695 aa29.63■■■□□ 2.33
RFWD2-201ENST00000308769 IGKV5-2P06315 115 aa29.63■■■□□ 2.33
RFWD2-201ENST00000308769 MTX1Q13505 466 aa29.63■■■□□ 2.33
RFWD2-201ENST00000308769 STAP2Q9UGK3 403 aa29.63■■■□□ 2.33
RFWD2-201ENST00000308769 GRM8O00222 908 aa29.62■■■□□ 2.33
RFWD2-201ENST00000308769 EIF5BO60841 1220 aaKnown RBP29.62■■■□□ 2.33
RFWD2-201ENST00000308769 SNX21Q969T3 373 aa29.62■■■□□ 2.33
RFWD2-201ENST00000308769 AFDNP55196 1824 aaKnown RBP29.61■■■□□ 2.33
RFWD2-201ENST00000308769 NUTM1Q86Y26 1132 aa29.61■■■□□ 2.33
RFWD2-201ENST00000308769 DDX54Q8TDD1 881 aaKnown RBP29.61■■■□□ 2.33
RFWD2-201ENST00000308769 USP26Q9BXU7 913 aa29.61■■■□□ 2.33
RFWD2-201ENST00000308769 ROBO1Q9Y6N7 1651 aa29.61■■■□□ 2.33
RFWD2-201ENST00000308769 ARFGEF2Q9Y6D5 1785 aa29.61■■■□□ 2.33
RFWD2-201ENST00000308769 PAPPAQ13219 1627 aa29.61■■■□□ 2.33
RFWD2-201ENST00000308769 FRAT2O75474 233 aaPredicted RBP29.6■■■□□ 2.33
RFWD2-201ENST00000308769 KIF1BPQ96EK5 621 aa29.6■■■□□ 2.33
RFWD2-201ENST00000308769 RBM42Q9BTD8 480 aaKnown RBP29.6■■■□□ 2.33
RFWD2-201ENST00000308769 AK9Q5TCS8 1911 aa29.6■■■□□ 2.33
RFWD2-201ENST00000308769 SUCLG2Q96I99 432 aa29.6■■■□□ 2.33
RFWD2-201ENST00000308769 UTYO14607 1347 aa29.6■■■□□ 2.33
RFWD2-201ENST00000308769 TOGARAM1Q9Y4F4 1720 aa29.59■■■□□ 2.33
RFWD2-201ENST00000308769 KAZALD1Q96I82 304 aa29.59■■■□□ 2.33
RFWD2-201ENST00000308769 ERVV-2B6SEH9 535 aa29.58■■■□□ 2.33
RFWD2-201ENST00000308769 NKX1-1Q15270 411 aaPredicted RBP29.58■■■□□ 2.33
RFWD2-201ENST00000308769 NEURL1BA8MQ27 555 aa29.57■■■□□ 2.32
RFWD2-201ENST00000308769 CD2BP2O95400 341 aaKnown RBP29.57■■■□□ 2.32
RFWD2-201ENST00000308769 NEXNQ0ZGT2 675 aa29.57■■■□□ 2.32
RFWD2-201ENST00000308769 MYD88Q99836 296 aa29.57■■■□□ 2.32
RFWD2-201ENST00000308769 ANKRD13DQ6ZTN6 518 aa29.57■■■□□ 2.32
RFWD2-201ENST00000308769 METTL22Q9BUU2 404 aaPredicted RBP29.57■■■□□ 2.32
RFWD2-201ENST00000308769 HDAC5Q9UQL6 1122 aa29.57■■■□□ 2.32
RFWD2-201ENST00000308769 KCPQ6ZWJ8 1503 aa29.57■■■□□ 2.32
RFWD2-201ENST00000308769 AOX1Q06278 1338 aa29.57■■■□□ 2.32
RFWD2-201ENST00000308769 TRIM6-TRIM34B2RNG4 842 aa29.56■■■□□ 2.32
RFWD2-201ENST00000308769 RILPL2Q969X0 211 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms