RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 KAT6BQ8WYB5 2073 aa17.89■□□□□ 0.45
LEMD3-201ENST00000308330 KIF1CO43896 1103 aaKnown RBP17.88■□□□□ 0.45
LEMD3-201ENST00000308330 ANAPC15P60006 121 aa17.88■□□□□ 0.45
LEMD3-201ENST00000308330 TAF7Q15545 349 aaPredicted RBP17.88■□□□□ 0.45
LEMD3-201ENST00000308330 CCDC97Q96F63 343 aaPredicted RBP17.88■□□□□ 0.45
LEMD3-201ENST00000308330 GEMIN8Q9NWZ8 242 aaKnown RBP17.88■□□□□ 0.45
LEMD3-201ENST00000308330 TTC21BQ7Z4L5 1316 aa17.88■□□□□ 0.45
LEMD3-201ENST00000308330 EZRP15311 586 aaKnown RBP17.88■□□□□ 0.45
LEMD3-201ENST00000308330 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
LEMD3-201ENST00000308330 NUP133Q8WUM0 1156 aa17.87■□□□□ 0.45
LEMD3-201ENST00000308330 CCDC85AQ96PX6 553 aaPredicted RBP17.87■□□□□ 0.45
LEMD3-201ENST00000308330 NCAPGQ9BPX3 1015 aa17.87■□□□□ 0.45
LEMD3-201ENST00000308330 HSP90AB2PQ58FF8 381 aa17.87■□□□□ 0.45
LEMD3-201ENST00000308330 NUCKS1Q9H1E3 243 aaKnown RBP17.87■□□□□ 0.45
LEMD3-201ENST00000308330 SIL1Q9H173 461 aa17.87■□□□□ 0.45
LEMD3-201ENST00000308330 CCT4P50991 539 aaKnown RBP17.87■□□□□ 0.45
LEMD3-201ENST00000308330 RBBP5Q15291 538 aaKnown RBP17.87■□□□□ 0.45
LEMD3-201ENST00000308330 CCDC57Q2TAC2 916 aa17.87■□□□□ 0.45
LEMD3-201ENST00000308330 DUSP27Q5VZP5 1158 aa17.87■□□□□ 0.45
LEMD3-201ENST00000308330 JRKLQ9Y4A0 524 aa17.87■□□□□ 0.45
LEMD3-201ENST00000308330 NAA25Q14CX7 972 aa17.86■□□□□ 0.45
LEMD3-201ENST00000308330 ANKRD18AQ8IVF6 992 aa17.86■□□□□ 0.45
LEMD3-201ENST00000308330 TNPO1Q92973 898 aaKnown RBP17.86■□□□□ 0.45
LEMD3-201ENST00000308330 IFNL2Q8IZJ0 200 aa17.86■□□□□ 0.45
LEMD3-201ENST00000308330 UHRF1BP1Q6BDS2 1440 aa17.86■□□□□ 0.45
LEMD3-201ENST00000308330 ZPR1O75312 459 aa17.86■□□□□ 0.45
LEMD3-201ENST00000308330 LRRC59Q96AG4 307 aaKnown RBP17.85■□□□□ 0.45
LEMD3-201ENST00000308330 TBC1D2BQ9UPU7 963 aa17.85■□□□□ 0.45
LEMD3-201ENST00000308330 V9GYY5 206 aaPredicted RBP17.85■□□□□ 0.45
LEMD3-201ENST00000308330 CAPN2P17655 700 aa17.84■□□□□ 0.45
LEMD3-201ENST00000308330 ABCA5Q8WWZ7 1642 aa17.84■□□□□ 0.45
LEMD3-201ENST00000308330 KLHL40Q2TBA0 621 aa17.84■□□□□ 0.45
LEMD3-201ENST00000308330 ATF7IPQ6VMQ6 1270 aa17.84■□□□□ 0.45
LEMD3-201ENST00000308330 SF3A1Q15459 793 aaKnown RBP17.84■□□□□ 0.45
LEMD3-201ENST00000308330 SPATS2LQ9NUQ6 558 aaKnown RBP17.84■□□□□ 0.45
LEMD3-201ENST00000308330 ITSN2Q9NZM3 1697 aa17.84■□□□□ 0.45
LEMD3-201ENST00000308330 FSD1Q9BTV5 496 aa17.83■□□□□ 0.45
LEMD3-201ENST00000308330 YY1AP1Q9H869 796 aa17.83■□□□□ 0.45
LEMD3-201ENST00000308330 CPLX1O14810 134 aa17.83■□□□□ 0.45
LEMD3-201ENST00000308330 MICALCLQ6ZW33 695 aa17.83■□□□□ 0.45
LEMD3-201ENST00000308330 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.83■□□□□ 0.44
LEMD3-201ENST00000308330 TTC21AQ8NDW8 1320 aa17.83■□□□□ 0.44
LEMD3-201ENST00000308330 USP25Q9UHP3 1055 aa17.82■□□□□ 0.44
LEMD3-201ENST00000308330 DISP3Q9P2K9 1392 aa17.82■□□□□ 0.44
LEMD3-201ENST00000308330 H3BQV1 296 aa17.82■□□□□ 0.44
LEMD3-201ENST00000308330 IFFO2Q5TF58 517 aa17.82■□□□□ 0.44
LEMD3-201ENST00000308330 CEP57Q86XR8 500 aa17.82■□□□□ 0.44
LEMD3-201ENST00000308330 GCKP35557 465 aa17.82■□□□□ 0.44
LEMD3-201ENST00000308330 CLNS1AP54105 237 aaKnown RBP17.82■□□□□ 0.44
LEMD3-201ENST00000308330 PDE3AQ14432 1141 aa17.82■□□□□ 0.44
LEMD3-201ENST00000308330 RPUSD2Q8IZ73 545 aaKnown RBP17.82■□□□□ 0.44
LEMD3-201ENST00000308330 BCL2L12Q9HB09 334 aa17.82■□□□□ 0.44
LEMD3-201ENST00000308330 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
LEMD3-201ENST00000308330 GNL3LQ9NVN8 582 aaKnown RBP17.82■□□□□ 0.44
LEMD3-201ENST00000308330 ZNF500O60304 480 aaPredicted RBP17.81■□□□□ 0.44
LEMD3-201ENST00000308330 LRRCC1Q9C099 1032 aa17.81■□□□□ 0.44
LEMD3-201ENST00000308330 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
LEMD3-201ENST00000308330 PBRM1Q86U86 1689 aa17.81■□□□□ 0.44
LEMD3-201ENST00000308330 K7ELQ4 463 aaPredicted RBP17.81■□□□□ 0.44
LEMD3-201ENST00000308330 SMC2O95347 1197 aa17.8■□□□□ 0.44
LEMD3-201ENST00000308330 CCDC192P0DO97 292 aa17.8■□□□□ 0.44
LEMD3-201ENST00000308330 CEP126Q9P2H0 1117 aa17.8■□□□□ 0.44
LEMD3-201ENST00000308330 ZRANB1Q9UGI0 708 aa17.8■□□□□ 0.44
LEMD3-201ENST00000308330 SRGAP3O43295 1099 aa17.8■□□□□ 0.44
LEMD3-201ENST00000308330 NFXL1Q6ZNB6 911 aa17.8■□□□□ 0.44
LEMD3-201ENST00000308330 CCDC158Q5M9N0 1113 aa17.8■□□□□ 0.44
LEMD3-201ENST00000308330 TSC1Q92574 1164 aa17.8■□□□□ 0.44
LEMD3-201ENST00000308330 FMNL2Q96PY5 1086 aa17.8■□□□□ 0.44
LEMD3-201ENST00000308330 ERICH2A1L162 156 aa17.79■□□□□ 0.44
LEMD3-201ENST00000308330 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
LEMD3-201ENST00000308330 CWC22Q9HCG8 908 aaKnown RBP17.79■□□□□ 0.44
LEMD3-201ENST00000308330 RNF187Q5TA31 235 aaPredicted RBP17.79■□□□□ 0.44
LEMD3-201ENST00000308330 GOLGA6L10A0A0M3HER8 536 aa17.79■□□□□ 0.44
LEMD3-201ENST00000308330 INTS3Q68E01 1043 aaKnown RBP17.79■□□□□ 0.44
LEMD3-201ENST00000308330 ORAI2Q96SN7 254 aa17.79■□□□□ 0.44
LEMD3-201ENST00000308330 GCP02774 474 aa17.79■□□□□ 0.44
LEMD3-201ENST00000308330 GTF3C6Q969F1 213 aa17.79■□□□□ 0.44
LEMD3-201ENST00000308330 GBP3Q9H0R5 595 aa17.79■□□□□ 0.44
LEMD3-201ENST00000308330 MAP2K1Q02750 393 aaPredicted RBP17.78■□□□□ 0.44
LEMD3-201ENST00000308330 ZRSR2Q15696 482 aaKnown RBP17.78■□□□□ 0.44
LEMD3-201ENST00000308330 RSRC1Q96IZ7 334 aaKnown RBP17.78■□□□□ 0.44
LEMD3-201ENST00000308330 TARBP1Q13395 1621 aaKnown RBP17.78■□□□□ 0.44
LEMD3-201ENST00000308330 ZSCAN26Q16670 478 aa17.78■□□□□ 0.44
LEMD3-201ENST00000308330 RNF168Q8IYW5 571 aaPredicted RBP17.78■□□□□ 0.44
LEMD3-201ENST00000308330 PPIP5K1Q6PFW1 1433 aa17.78■□□□□ 0.44
LEMD3-201ENST00000308330 SKAP1Q86WV1 359 aa17.78■□□□□ 0.44
LEMD3-201ENST00000308330 ZCRB1Q8TBF4 217 aaKnown RBP17.78■□□□□ 0.44
LEMD3-201ENST00000308330 DNAJC5Q9H3Z4 198 aa17.78■□□□□ 0.44
LEMD3-201ENST00000308330 SWAP70Q9UH65 585 aa17.78■□□□□ 0.44
LEMD3-201ENST00000308330 DDB1Q16531 1140 aa17.78■□□□□ 0.44
LEMD3-201ENST00000308330 LUZP1Q86V48 1076 aa17.78■□□□□ 0.44
LEMD3-201ENST00000308330 MTMR7Q9Y216 660 aa17.78■□□□□ 0.44
LEMD3-201ENST00000308330 ADCY5O95622 1261 aa17.77■□□□□ 0.44
LEMD3-201ENST00000308330 CEP135Q66GS9 1140 aa17.77■□□□□ 0.44
LEMD3-201ENST00000308330 LARP1Q6PKG0 1096 aaKnown RBP17.77■□□□□ 0.44
LEMD3-201ENST00000308330 NEO1Q92859 1461 aa17.77■□□□□ 0.44
LEMD3-201ENST00000308330 DBN1Q16643 649 aa17.77■□□□□ 0.44
LEMD3-201ENST00000308330 IRAK4Q9NWZ3 460 aa17.77■□□□□ 0.44
LEMD3-201ENST00000308330 DHX8Q14562 1220 aaKnown RBP17.77■□□□□ 0.43
LEMD3-201ENST00000308330 CCDC196A0A1B0GTZ2 297 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms