RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 COL18A1P39060 1754 aa14.1□□□□□ -0.15
SCG2-201ENST00000305409 SURF6O75683 361 aaKnown RBP14.1□□□□□ -0.15
SCG2-201ENST00000305409 TTC5Q8N0Z6 440 aa14.1□□□□□ -0.15
SCG2-201ENST00000305409 DCAF5Q96JK2 942 aa14.1□□□□□ -0.15
SCG2-201ENST00000305409 LRRCC1Q9C099 1032 aa14.1□□□□□ -0.15
SCG2-201ENST00000305409 CAMTA1Q9Y6Y1 1673 aa14.09□□□□□ -0.15
SCG2-201ENST00000305409 CDC45O75419 566 aa14.09□□□□□ -0.15
SCG2-201ENST00000305409 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
SCG2-201ENST00000305409 C9orf78Q9NZ63 289 aaPredicted RBP14.09□□□□□ -0.15
SCG2-201ENST00000305409 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
SCG2-201ENST00000305409 CPDO75976 1380 aa14.09□□□□□ -0.15
SCG2-201ENST00000305409 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
SCG2-201ENST00000305409 WDR17Q8IZU2 1322 aa14.09□□□□□ -0.15
SCG2-201ENST00000305409 PDE1AP54750 535 aa14.09□□□□□ -0.15
SCG2-201ENST00000305409 KSR2Q6VAB6 950 aa14.09□□□□□ -0.15
SCG2-201ENST00000305409 NUTM1Q86Y26 1132 aa14.09□□□□□ -0.15
SCG2-201ENST00000305409 ZCRB1Q8TBF4 217 aaKnown RBP14.08□□□□□ -0.16
SCG2-201ENST00000305409 XAGE3Q8WTP9 111 aa14.08□□□□□ -0.16
SCG2-201ENST00000305409 NFKBIBQ15653 356 aa14.08□□□□□ -0.16
SCG2-201ENST00000305409 COPS6Q7L5N1 327 aa14.08□□□□□ -0.16
SCG2-201ENST00000305409 DDX21Q9NR30 783 aaKnown RBP eCLIP14.08□□□□□ -0.16
SCG2-201ENST00000305409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.08□□□□□ -0.16
SCG2-201ENST00000305409 PTCD1O75127 700 aaKnown RBP14.07□□□□□ -0.16
SCG2-201ENST00000305409 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
SCG2-201ENST00000305409 HYPKQ9NX55 129 aa14.07□□□□□ -0.16
SCG2-201ENST00000305409 PA2G4Q9UQ80 394 aaKnown RBP14.07□□□□□ -0.16
SCG2-201ENST00000305409 MAP4K4O95819 1239 aaPredicted RBP14.06□□□□□ -0.16
SCG2-201ENST00000305409 SSH3Q8TE77 659 aa14.06□□□□□ -0.16
SCG2-201ENST00000305409 FRAT2O75474 233 aaPredicted RBP14.06□□□□□ -0.16
SCG2-201ENST00000305409 IBTKQ9P2D0 1353 aaPredicted RBP14.05□□□□□ -0.16
SCG2-201ENST00000305409 RILPL2Q969X0 211 aa14.05□□□□□ -0.16
SCG2-201ENST00000305409 KIF2CQ99661 725 aa14.05□□□□□ -0.16
SCG2-201ENST00000305409 BTG4Q9NY30 223 aa14.05□□□□□ -0.16
SCG2-201ENST00000305409 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
SCG2-201ENST00000305409 TRIM6-TRIM34B2RNG4 842 aa14.05□□□□□ -0.16
SCG2-201ENST00000305409 CD2BP2O95400 341 aaKnown RBP14.05□□□□□ -0.16
SCG2-201ENST00000305409 SNRPA1P09661 255 aaKnown RBP14.05□□□□□ -0.16
SCG2-201ENST00000305409 MX1P20591 662 aa14.05□□□□□ -0.16
SCG2-201ENST00000305409 MYD88Q99836 296 aa14.05□□□□□ -0.16
SCG2-201ENST00000305409 IGKV5-2P06315 115 aa14.04□□□□□ -0.16
SCG2-201ENST00000305409 IL2RBP14784 551 aa14.04□□□□□ -0.16
SCG2-201ENST00000305409 RBM25P49756 843 aaKnown RBP14.04□□□□□ -0.16
SCG2-201ENST00000305409 UNC5CLQ8IV45 518 aa14.04□□□□□ -0.16
SCG2-201ENST00000305409 FMNL2Q96PY5 1086 aa14.04□□□□□ -0.16
SCG2-201ENST00000305409 CHMP4AQ9BY43 222 aa14.04□□□□□ -0.16
SCG2-201ENST00000305409 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
SCG2-201ENST00000305409 COL5A2P05997 1499 aaPredicted RBP14.04□□□□□ -0.16
SCG2-201ENST00000305409 ATP5J2-PTCD1G3V325 749 aa14.04□□□□□ -0.16
SCG2-201ENST00000305409 OS9Q13438 667 aaPredicted RBP14.04□□□□□ -0.16
SCG2-201ENST00000305409 POLA2Q14181 598 aa14.04□□□□□ -0.16
SCG2-201ENST00000305409 SUCLG2Q96I99 432 aa14.04□□□□□ -0.16
SCG2-201ENST00000305409 PXDNLA1KZ92 1463 aa14.03□□□□□ -0.16
SCG2-201ENST00000305409 CACNA1FO60840 1977 aa14.03□□□□□ -0.16
SCG2-201ENST00000305409 DDX58O95786 925 aaKnown RBP14.03□□□□□ -0.16
SCG2-201ENST00000305409 HSP90AB1P08238 724 aaKnown RBP14.03□□□□□ -0.16
SCG2-201ENST00000305409 KLHDC4Q8TBB5 520 aa14.03□□□□□ -0.16
SCG2-201ENST00000305409 RHPN1Q8TCX5 695 aa14.03□□□□□ -0.16
SCG2-201ENST00000305409 CARD10Q9BWT7 1032 aa14.03□□□□□ -0.16
SCG2-201ENST00000305409 KAZALD1Q96I82 304 aa14.02□□□□□ -0.16
SCG2-201ENST00000305409 GRM8O00222 908 aa14.02□□□□□ -0.17
SCG2-201ENST00000305409 A1BGP04217 495 aa14.02□□□□□ -0.17
SCG2-201ENST00000305409 LINS1Q8NG48 757 aa14.02□□□□□ -0.17
SCG2-201ENST00000305409 BICC1Q9H694 974 aaKnown RBP14.02□□□□□ -0.17
SCG2-201ENST00000305409 SALL3Q9BXA9 1300 aa14.02□□□□□ -0.17
SCG2-201ENST00000305409 PCDH11XQ9BZA7 1347 aa14.02□□□□□ -0.17
SCG2-201ENST00000305409 PCDH11YQ9BZA8 1340 aa14.02□□□□□ -0.17
SCG2-201ENST00000305409 CRYBG1Q9Y4K1 1723 aa14.02□□□□□ -0.17
SCG2-201ENST00000305409 DEKP35659 375 aaKnown RBP14.01□□□□□ -0.17
SCG2-201ENST00000305409 ANKRD13DQ6ZTN6 518 aa14.01□□□□□ -0.17
SCG2-201ENST00000305409 HSCBQ8IWL3 235 aa14.01□□□□□ -0.17
SCG2-201ENST00000305409 SIL1Q9H173 461 aa14.01□□□□□ -0.17
SCG2-201ENST00000305409 ZNF330Q9Y3S2 320 aaPredicted RBP14.01□□□□□ -0.17
SCG2-201ENST00000305409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.01□□□□□ -0.17
SCG2-201ENST00000305409 ALDH1L1O75891 902 aa14.01□□□□□ -0.17
SCG2-201ENST00000305409 LRP10Q7Z4F1 713 aa14.01□□□□□ -0.17
SCG2-201ENST00000305409 ANTXR1Q9H6X2 564 aa14.01□□□□□ -0.17
SCG2-201ENST00000305409 EPHA10Q5JZY3 1008 aa14□□□□□ -0.17
SCG2-201ENST00000305409 USP26Q9BXU7 913 aa14□□□□□ -0.17
SCG2-201ENST00000305409 OSBPL3Q9H4L5 887 aa14□□□□□ -0.17
SCG2-201ENST00000305409 SIPA1L3O60292 1781 aaPredicted RBP14□□□□□ -0.17
SCG2-201ENST00000305409 NEURL1BA8MQ27 555 aa14□□□□□ -0.17
SCG2-201ENST00000305409 NBPF26B4DH59 902 aa14□□□□□ -0.17
SCG2-201ENST00000305409 ADAMTS2O95450 1211 aa14□□□□□ -0.17
SCG2-201ENST00000305409 NBPF14Q5TI25 921 aa14□□□□□ -0.17
SCG2-201ENST00000305409 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
SCG2-201ENST00000305409 NBPF15Q8N660 670 aa14□□□□□ -0.17
SCG2-201ENST00000305409 TTLL7Q6ZT98 887 aa13.99□□□□□ -0.17
SCG2-201ENST00000305409 SCN11AQ9UI33 1791 aa13.99□□□□□ -0.17
SCG2-201ENST00000305409 NEXNQ0ZGT2 675 aa13.99□□□□□ -0.17
SCG2-201ENST00000305409 CASC1Q6TDU7 716 aa13.98□□□□□ -0.17
SCG2-201ENST00000305409 KIF1BPQ96EK5 621 aa13.98□□□□□ -0.17
SCG2-201ENST00000305409 METTL22Q9BUU2 404 aaPredicted RBP13.98□□□□□ -0.17
SCG2-201ENST00000305409 KAT6BQ8WYB5 2073 aa13.98□□□□□ -0.17
SCG2-201ENST00000305409 C5P01031 1676 aa13.98□□□□□ -0.17
SCG2-201ENST00000305409 GCKRQ14397 625 aa13.98□□□□□ -0.17
SCG2-201ENST00000305409 IL25Q9H293 177 aa13.98□□□□□ -0.17
SCG2-201ENST00000305409 ADAMTS7Q9UKP4 1686 aa13.98□□□□□ -0.17
SCG2-201ENST00000305409 A0A0G2JS52 829 aa13.97□□□□□ -0.17
SCG2-201ENST00000305409 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
SCG2-201ENST00000305409 UBE3BQ7Z3V4 1068 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms