RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 CABLES1Q8TDN4 633 aa19.74■□□□□ 0.75
LONRF3-201ENST00000304778 NPHP3Q7Z494 1330 aa19.73■□□□□ 0.75
LONRF3-201ENST00000304778 EIF2S2P20042 333 aaKnown RBP19.73■□□□□ 0.75
LONRF3-201ENST00000304778 CASC1Q6TDU7 716 aa19.73■□□□□ 0.75
LONRF3-201ENST00000304778 CAMTA1Q9Y6Y1 1673 aa19.73■□□□□ 0.75
LONRF3-201ENST00000304778 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.73■□□□□ 0.75
LONRF3-201ENST00000304778 CHAMP1Q96JM3 812 aa19.73■□□□□ 0.75
LONRF3-201ENST00000304778 PHAXQ9H814 394 aaKnown RBP19.73■□□□□ 0.75
LONRF3-201ENST00000304778 GOLGA6L22H0YM25 854 aa19.72■□□□□ 0.75
LONRF3-201ENST00000304778 CCDC173Q0VFZ6 552 aa19.72■□□□□ 0.75
LONRF3-201ENST00000304778 ARID3AQ99856 593 aa19.72■□□□□ 0.75
LONRF3-201ENST00000304778 SMARCA5O60264 1052 aaPredicted RBP19.72■□□□□ 0.75
LONRF3-201ENST00000304778 MSNP26038 577 aaKnown RBP19.72■□□□□ 0.75
LONRF3-201ENST00000304778 KDM3BQ7LBC6 1761 aa19.71■□□□□ 0.75
LONRF3-201ENST00000304778 R3HCC1Q9Y3T6 440 aaKnown RBP19.71■□□□□ 0.75
LONRF3-201ENST00000304778 HMMRO75330 724 aa19.7■□□□□ 0.74
LONRF3-201ENST00000304778 GNAI2P04899 355 aa19.7■□□□□ 0.74
LONRF3-201ENST00000304778 MAP7D2Q96T17 732 aa19.7■□□□□ 0.74
LONRF3-201ENST00000304778 NLRP2Q9NX02 1062 aa19.7■□□□□ 0.74
LONRF3-201ENST00000304778 APBB1O00213 710 aa19.7■□□□□ 0.74
LONRF3-201ENST00000304778 PPP1R9BQ96SB3 815 aa19.7■□□□□ 0.74
LONRF3-201ENST00000304778 BAG4O95429 457 aaKnown RBP19.69■□□□□ 0.74
LONRF3-201ENST00000304778 NCLP19338 710 aaKnown RBP19.69■□□□□ 0.74
LONRF3-201ENST00000304778 NASPP49321 788 aaPredicted RBP19.69■□□□□ 0.74
LONRF3-201ENST00000304778 TNS3Q68CZ2 1445 aa19.69■□□□□ 0.74
LONRF3-201ENST00000304778 HOXB7P09629 217 aa19.69■□□□□ 0.74
LONRF3-201ENST00000304778 CACNA1FO60840 1977 aa19.69■□□□□ 0.74
LONRF3-201ENST00000304778 CHPF2Q9P2E5 772 aa19.68■□□□□ 0.74
LONRF3-201ENST00000304778 PKP1Q13835 747 aa19.68■□□□□ 0.74
LONRF3-201ENST00000304778 REC8O95072 547 aa19.68■□□□□ 0.74
LONRF3-201ENST00000304778 TERF1P54274 439 aa19.68■□□□□ 0.74
LONRF3-201ENST00000304778 NUCB2P80303 420 aa19.68■□□□□ 0.74
LONRF3-201ENST00000304778 CHRNA2Q15822 529 aa19.68■□□□□ 0.74
LONRF3-201ENST00000304778 KLHL40Q2TBA0 621 aa19.68■□□□□ 0.74
LONRF3-201ENST00000304778 IBTKQ9P2D0 1353 aaPredicted RBP19.68■□□□□ 0.74
LONRF3-201ENST00000304778 GNAI3P08754 354 aa19.67■□□□□ 0.74
LONRF3-201ENST00000304778 SPATA31A3Q5VYP0 1347 aa19.67■□□□□ 0.74
LONRF3-201ENST00000304778 RAPGEF4Q8WZA2 1011 aa19.67■□□□□ 0.74
LONRF3-201ENST00000304778 ANP32BQ92688 251 aaKnown RBP19.67■□□□□ 0.74
LONRF3-201ENST00000304778 OSBPL3Q9H4L5 887 aa19.67■□□□□ 0.74
LONRF3-201ENST00000304778 DDX49Q9Y6V7 483 aaKnown RBP19.67■□□□□ 0.74
LONRF3-201ENST00000304778 OVOS2A0A0G2JMS6 1433 aa19.66■□□□□ 0.74
LONRF3-201ENST00000304778 ST18O60284 1047 aa19.66■□□□□ 0.74
LONRF3-201ENST00000304778 CYP2E1P05181 493 aaPredicted RBP19.66■□□□□ 0.74
LONRF3-201ENST00000304778 TUBGCP6Q96RT7 1819 aa19.66■□□□□ 0.74
LONRF3-201ENST00000304778 XIRP1Q702N8 1843 aaKnown RBP19.66■□□□□ 0.74
LONRF3-201ENST00000304778 ANXA1P04083 346 aa19.65■□□□□ 0.74
LONRF3-201ENST00000304778 CSB-PGBD3P0DP91 1061 aa19.65■□□□□ 0.74
LONRF3-201ENST00000304778 BRINP3Q76B58 766 aa19.65■□□□□ 0.74
LONRF3-201ENST00000304778 COL18A1P39060 1754 aa19.65■□□□□ 0.74
LONRF3-201ENST00000304778 PXDNLA1KZ92 1463 aa19.65■□□□□ 0.74
LONRF3-201ENST00000304778 ERC2O15083 957 aa19.65■□□□□ 0.74
LONRF3-201ENST00000304778 USP44Q9H0E7 712 aa19.65■□□□□ 0.74
LONRF3-201ENST00000304778 ZNF335Q9H4Z2 1342 aaPredicted RBP19.64■□□□□ 0.74
LONRF3-201ENST00000304778 LMTK3Q96Q04 1460 aa19.64■□□□□ 0.73
LONRF3-201ENST00000304778 CWC22Q9HCG8 908 aaKnown RBP19.64■□□□□ 0.73
LONRF3-201ENST00000304778 PDE1AP54750 535 aa19.64■□□□□ 0.73
LONRF3-201ENST00000304778 MCTP1Q6DN14 999 aa19.64■□□□□ 0.73
LONRF3-201ENST00000304778 SMAP1Q8IYB5 467 aaPredicted RBP19.64■□□□□ 0.73
LONRF3-201ENST00000304778 ZHX1Q9UKY1 873 aaPredicted RBP19.64■□□□□ 0.73
LONRF3-201ENST00000304778 TATP17735 454 aaPredicted RBP19.63■□□□□ 0.73
LONRF3-201ENST00000304778 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
LONRF3-201ENST00000304778 PRDM10Q9NQV6 1147 aa19.63■□□□□ 0.73
LONRF3-201ENST00000304778 LRRFIP2Q9Y608 721 aaKnown RBP19.63■□□□□ 0.73
LONRF3-201ENST00000304778 UQCRHLA0A096LP55 91 aa19.63■□□□□ 0.73
LONRF3-201ENST00000304778 GIGYF1O75420 1035 aaPredicted RBP19.63■□□□□ 0.73
LONRF3-201ENST00000304778 UQCRHP07919 91 aa19.63■□□□□ 0.73
LONRF3-201ENST00000304778 N4BP2Q86UW6 1770 aaPredicted RBP19.63■□□□□ 0.73
LONRF3-201ENST00000304778 STRCQ7RTU9 1775 aa19.63■□□□□ 0.73
LONRF3-201ENST00000304778 PNMA6EA0A0J9YXQ4 647 aa19.62■□□□□ 0.73
LONRF3-201ENST00000304778 ATP8B2P98198 1209 aa19.62■□□□□ 0.73
LONRF3-201ENST00000304778 CAVIN1Q6NZI2 390 aaKnown RBP19.62■□□□□ 0.73
LONRF3-201ENST00000304778 PRAMEF22A3QJZ6 481 aa19.62■□□□□ 0.73
LONRF3-201ENST00000304778 FOXD4L5Q5VV16 416 aaPredicted RBP19.62■□□□□ 0.73
LONRF3-201ENST00000304778 FOXD4L4Q8WXT5 416 aaPredicted RBP19.62■□□□□ 0.73
LONRF3-201ENST00000304778 EXOC6BQ9Y2D4 811 aa19.62■□□□□ 0.73
LONRF3-201ENST00000304778 MEGF6O75095 1541 aa19.61■□□□□ 0.73
LONRF3-201ENST00000304778 PI4KAP2A4QPH2 592 aa19.61■□□□□ 0.73
LONRF3-201ENST00000304778 FGD1P98174 961 aa19.61■□□□□ 0.73
LONRF3-201ENST00000304778 PI4KAP1Q8N8J0 262 aa19.61■□□□□ 0.73
LONRF3-201ENST00000304778 SRCIN1Q9C0H9 1055 aa19.61■□□□□ 0.73
LONRF3-201ENST00000304778 RBM27Q9P2N5 1060 aaKnown RBP19.61■□□□□ 0.73
LONRF3-201ENST00000304778 HEG1Q9ULI3 1381 aa19.61■□□□□ 0.73
LONRF3-201ENST00000304778 UBTFL1P0CB47 393 aaPredicted RBP19.61■□□□□ 0.73
LONRF3-201ENST00000304778 SALL3Q9BXA9 1300 aa19.61■□□□□ 0.73
LONRF3-201ENST00000304778 DBF4Q9UBU7 674 aaPredicted RBP19.6■□□□□ 0.73
LONRF3-201ENST00000304778 SPG7Q9UQ90 795 aa19.6■□□□□ 0.73
LONRF3-201ENST00000304778 CRYBG1Q9Y4K1 1723 aa19.6■□□□□ 0.73
LONRF3-201ENST00000304778 PHKG2P15735 406 aa19.6■□□□□ 0.73
LONRF3-201ENST00000304778 DNAAF4Q8WXU2 420 aa19.6■□□□□ 0.73
LONRF3-201ENST00000304778 SIPA1L3O60292 1781 aaPredicted RBP19.6■□□□□ 0.73
LONRF3-201ENST00000304778 ADAMTS7Q9UKP4 1686 aa19.6■□□□□ 0.73
LONRF3-201ENST00000304778 KDM6AO15550 1401 aaPredicted RBP19.59■□□□□ 0.73
LONRF3-201ENST00000304778 PROSER3Q2NL68 480 aa19.59■□□□□ 0.73
LONRF3-201ENST00000304778 BEND3Q5T5X7 828 aa19.59■□□□□ 0.73
LONRF3-201ENST00000304778 ZGPATQ8N5A5 531 aaKnown RBP19.59■□□□□ 0.73
LONRF3-201ENST00000304778 LMBRD1Q9NUN5 540 aa19.58■□□□□ 0.73
LONRF3-201ENST00000304778 SLAIN2Q9P270 581 aa19.58■□□□□ 0.73
LONRF3-201ENST00000304778 CPDO75976 1380 aa19.58■□□□□ 0.72
LONRF3-201ENST00000304778 SLC39A6Q13433 755 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms