RNA–Protein interactions for RNA: ENST00000303577.6

PCBP1-201, Transcript of poly(rC) binding protein 1, humanhuman

APPRIS P1 BASIC

Gene PCBP1, Length 1,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP1-201ENST00000303577 PALLDQ8WX93 1383 aa20.69■□□□□ 0.9
PCBP1-201ENST00000303577 EN1Q05925 392 aaPredicted RBP20.69■□□□□ 0.9
PCBP1-201ENST00000303577 TSHZ2Q9NRE2 1034 aa20.69■□□□□ 0.9
PCBP1-201ENST00000303577 KCNQ4P56696 695 aa20.69■□□□□ 0.9
PCBP1-201ENST00000303577 CENPQQ7L2Z9 268 aaPredicted RBP20.69■□□□□ 0.9
PCBP1-201ENST00000303577 RGPD3A6NKT7 1758 aaPredicted RBP20.69■□□□□ 0.9
PCBP1-201ENST00000303577 RGPD4Q7Z3J3 1758 aa20.69■□□□□ 0.9
PCBP1-201ENST00000303577 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
PCBP1-201ENST00000303577 KDM2BQ8NHM5 1336 aa20.68■□□□□ 0.9
PCBP1-201ENST00000303577 BTBD11A6QL63 1104 aa20.68■□□□□ 0.9
PCBP1-201ENST00000303577 ARHGAP45Q92619 1136 aa20.68■□□□□ 0.9
PCBP1-201ENST00000303577 ITPRIPQ8IWB1 547 aa20.67■□□□□ 0.9
PCBP1-201ENST00000303577 PTCD1O75127 700 aaKnown RBP20.67■□□□□ 0.9
PCBP1-201ENST00000303577 BAG6P46379 1132 aa20.66■□□□□ 0.9
PCBP1-201ENST00000303577 EZH2Q15910 746 aaKnown RBP20.66■□□□□ 0.9
PCBP1-201ENST00000303577 CCDC125Q86Z20 511 aa20.66■□□□□ 0.9
PCBP1-201ENST00000303577 TMEM57Q8N5G2 664 aa20.66■□□□□ 0.9
PCBP1-201ENST00000303577 DDX19BQ9UMR2 479 aa20.66■□□□□ 0.9
PCBP1-201ENST00000303577 RREB1Q92766 1687 aa20.66■□□□□ 0.9
PCBP1-201ENST00000303577 TJP1Q07157 1748 aa20.65■□□□□ 0.9
PCBP1-201ENST00000303577 ZNF790Q6PG37 636 aa20.64■□□□□ 0.9
PCBP1-201ENST00000303577 RBM42Q9BTD8 480 aaKnown RBP20.64■□□□□ 0.9
PCBP1-201ENST00000303577 API5Q9BZZ5 524 aaKnown RBP20.64■□□□□ 0.9
PCBP1-201ENST00000303577 NUP188Q5SRE5 1749 aa20.64■□□□□ 0.89
PCBP1-201ENST00000303577 PROM2Q8N271 834 aa20.64■□□□□ 0.89
PCBP1-201ENST00000303577 SMARCC1Q92922 1105 aaPredicted RBP20.64■□□□□ 0.89
PCBP1-201ENST00000303577 SLC4A9Q96Q91 983 aa20.64■□□□□ 0.89
PCBP1-201ENST00000303577 CAMKK2Q96RR4 588 aa20.64■□□□□ 0.89
PCBP1-201ENST00000303577 C5P01031 1676 aa20.64■□□□□ 0.89
PCBP1-201ENST00000303577 SOS1Q07889 1333 aaPredicted RBP20.63■□□□□ 0.89
PCBP1-201ENST00000303577 PLSCR1O15162 318 aa20.63■□□□□ 0.89
PCBP1-201ENST00000303577 TTC5Q8N0Z6 440 aa20.63■□□□□ 0.89
PCBP1-201ENST00000303577 TXNRD1Q16881 649 aa20.62■□□□□ 0.89
PCBP1-201ENST00000303577 ZNF496Q96IT1 587 aaPredicted RBP20.62■□□□□ 0.89
PCBP1-201ENST00000303577 LRRC4BQ9NT99 713 aa20.62■□□□□ 0.89
PCBP1-201ENST00000303577 TAF1LQ8IZX4 1826 aa20.62■□□□□ 0.89
PCBP1-201ENST00000303577 LOC102724428A0A0B4J2F2 783 aa20.62■□□□□ 0.89
PCBP1-201ENST00000303577 SIK1P57059 783 aa20.62■□□□□ 0.89
PCBP1-201ENST00000303577 ABCC4O15439 1325 aa20.61■□□□□ 0.89
PCBP1-201ENST00000303577 CCNL1Q9UK58 526 aaPredicted RBP20.61■□□□□ 0.89
PCBP1-201ENST00000303577 SOCS7O14512 581 aa20.6■□□□□ 0.89
PCBP1-201ENST00000303577 COL5A3P25940 1745 aaPredicted RBP20.59■□□□□ 0.89
PCBP1-201ENST00000303577 ITPK1Q13572 414 aa20.59■□□□□ 0.89
PCBP1-201ENST00000303577 PRAMEF22A3QJZ6 481 aa20.59■□□□□ 0.89
PCBP1-201ENST00000303577 SLC4A2P04920 1241 aa20.59■□□□□ 0.89
PCBP1-201ENST00000303577 STK31Q9BXU1 1019 aa20.59■□□□□ 0.89
PCBP1-201ENST00000303577 PCDHB15Q9Y5E8 787 aa20.59■□□□□ 0.89
PCBP1-201ENST00000303577 ZNF831Q5JPB2 1677 aa20.59■□□□□ 0.89
PCBP1-201ENST00000303577 PTPRCP08575 1304 aa20.58■□□□□ 0.89
PCBP1-201ENST00000303577 IGHDP01880 384 aa20.58■□□□□ 0.89
PCBP1-201ENST00000303577 ATP6V1AP38606 617 aa20.58■□□□□ 0.89
PCBP1-201ENST00000303577 CCDC30Q5VVM6 783 aa20.58■□□□□ 0.89
PCBP1-201ENST00000303577 CICQ96RK0 1608 aaPredicted RBP20.58■□□□□ 0.88
PCBP1-201ENST00000303577 HEG1Q9ULI3 1381 aa20.57■□□□□ 0.88
PCBP1-201ENST00000303577 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
PCBP1-201ENST00000303577 FMNL2Q96PY5 1086 aa20.57■□□□□ 0.88
PCBP1-201ENST00000303577 CHMP4BQ9H444 224 aaKnown RBP20.57■□□□□ 0.88
PCBP1-201ENST00000303577 DNAJC10Q8IXB1 793 aa20.57■□□□□ 0.88
PCBP1-201ENST00000303577 LAMB4A4D0S4 1761 aa20.56■□□□□ 0.88
PCBP1-201ENST00000303577 LINC00116Q8NCU8 138 aa20.56■□□□□ 0.88
PCBP1-201ENST00000303577 ZBTB40Q9NUA8 1239 aa20.56■□□□□ 0.88
PCBP1-201ENST00000303577 C4BP0C0L5 1744 aa20.55■□□□□ 0.88
PCBP1-201ENST00000303577 SLC27A3Q5K4L6 730 aa20.54■□□□□ 0.88
PCBP1-201ENST00000303577 RWDD1Q9H446 243 aaPredicted RBP20.54■□□□□ 0.88
PCBP1-201ENST00000303577 HOXB7P09629 217 aa20.54■□□□□ 0.88
PCBP1-201ENST00000303577 HDGFL1Q5TGJ6 251 aa20.54■□□□□ 0.88
PCBP1-201ENST00000303577 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
PCBP1-201ENST00000303577 TUBGCP6Q96RT7 1819 aa20.53■□□□□ 0.88
PCBP1-201ENST00000303577 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
PCBP1-201ENST00000303577 G2E3Q7L622 706 aa20.52■□□□□ 0.88
PCBP1-201ENST00000303577 CHMP4AQ9BY43 222 aa20.52■□□□□ 0.88
PCBP1-201ENST00000303577 MYH14Q7Z406 1995 aaKnown RBP20.52■□□□□ 0.88
PCBP1-201ENST00000303577 SKAP1Q86WV1 359 aa20.51■□□□□ 0.87
PCBP1-201ENST00000303577 ZBTB7BO15156 539 aaPredicted RBP20.51■□□□□ 0.87
PCBP1-201ENST00000303577 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
PCBP1-201ENST00000303577 SNRPA1P09661 255 aaKnown RBP20.51■□□□□ 0.87
PCBP1-201ENST00000303577 ZNF827Q17R98 1081 aa20.51■□□□□ 0.87
PCBP1-201ENST00000303577 INTS3Q68E01 1043 aaKnown RBP20.51■□□□□ 0.87
PCBP1-201ENST00000303577 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
PCBP1-201ENST00000303577 SMIM5Q71RC9 77 aa20.5■□□□□ 0.87
PCBP1-201ENST00000303577 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
PCBP1-201ENST00000303577 CYP19A1P11511 503 aaPredicted RBP20.49■□□□□ 0.87
PCBP1-201ENST00000303577 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
PCBP1-201ENST00000303577 CACNA1FO60840 1977 aa20.49■□□□□ 0.87
PCBP1-201ENST00000303577 EIF2S2P20042 333 aaKnown RBP20.49■□□□□ 0.87
PCBP1-201ENST00000303577 FLIIQ13045 1269 aa20.49■□□□□ 0.87
PCBP1-201ENST00000303577 UBR3Q6ZT12 1888 aa20.48■□□□□ 0.87
PCBP1-201ENST00000303577 CRKLP46109 303 aaKnown RBP20.48■□□□□ 0.87
PCBP1-201ENST00000303577 HDAC1Q13547 482 aaPredicted RBP20.48■□□□□ 0.87
PCBP1-201ENST00000303577 AMIGO3Q86WK7 504 aa20.48■□□□□ 0.87
PCBP1-201ENST00000303577 A1BGP04217 495 aa20.46■□□□□ 0.87
PCBP1-201ENST00000303577 FKBP5Q13451 457 aaPredicted RBP20.46■□□□□ 0.87
PCBP1-201ENST00000303577 RBM19Q9Y4C8 960 aaKnown RBP20.46■□□□□ 0.87
PCBP1-201ENST00000303577 INTS5Q6P9B9 1019 aaKnown RBP20.46■□□□□ 0.87
PCBP1-201ENST00000303577 AKT1S1Q96B36 256 aa20.46■□□□□ 0.87
PCBP1-201ENST00000303577 GNPATO15228 680 aa20.45■□□□□ 0.86
PCBP1-201ENST00000303577 CCT4P50991 539 aaKnown RBP20.45■□□□□ 0.86
PCBP1-201ENST00000303577 CCDC87Q9NVE4 849 aa20.45■□□□□ 0.86
PCBP1-201ENST00000303577 ZBTB1Q9Y2K1 713 aa20.45■□□□□ 0.86
PCBP1-201ENST00000303577 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms