RNA–Protein interactions for RNA: ENST00000302946.12

SLFNL1-201, Transcript of schlafen like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLFNL1, Length 1,951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFNL1-201ENST00000302946 CEP85Q6P2H3 762 aa20.5■□□□□ 0.87
SLFNL1-201ENST00000302946 FNBP4Q8N3X1 1017 aaPredicted RBP20.5■□□□□ 0.87
SLFNL1-201ENST00000302946 MEIS3Q99687 375 aa20.5■□□□□ 0.87
SLFNL1-201ENST00000302946 STK31Q9BXU1 1019 aa20.5■□□□□ 0.87
SLFNL1-201ENST00000302946 CACNA1FO60840 1977 aa20.5■□□□□ 0.87
SLFNL1-201ENST00000302946 TNS2Q63HR2 1409 aa20.5■□□□□ 0.87
SLFNL1-201ENST00000302946 LRP6O75581 1613 aa20.5■□□□□ 0.87
SLFNL1-201ENST00000302946 BARGINQ6ZT62 677 aa20.5■□□□□ 0.87
SLFNL1-201ENST00000302946 RPAP2Q8IXW5 612 aaPredicted RBP20.5■□□□□ 0.87
SLFNL1-201ENST00000302946 EXOC5O00471 708 aa20.49■□□□□ 0.87
SLFNL1-201ENST00000302946 DDX54Q8TDD1 881 aaKnown RBP20.49■□□□□ 0.87
SLFNL1-201ENST00000302946 VPS72Q15906 364 aa20.48■□□□□ 0.87
SLFNL1-201ENST00000302946 TBC1D2Q9BYX2 928 aa20.48■□□□□ 0.87
SLFNL1-201ENST00000302946 NFATC2IPQ8NCF5 419 aa20.48■□□□□ 0.87
SLFNL1-201ENST00000302946 ZNF790Q6PG37 636 aa20.47■□□□□ 0.87
SLFNL1-201ENST00000302946 CCDC9Q9Y3X0 531 aaKnown RBP20.47■□□□□ 0.87
SLFNL1-201ENST00000302946 BCL9LQ86UU0 1499 aa20.47■□□□□ 0.87
SLFNL1-201ENST00000302946 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
SLFNL1-201ENST00000302946 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
SLFNL1-201ENST00000302946 CCT4P50991 539 aaKnown RBP20.46■□□□□ 0.87
SLFNL1-201ENST00000302946 MEX3CQ5U5Q3 659 aaKnown RBP20.46■□□□□ 0.87
SLFNL1-201ENST00000302946 TTC5Q8N0Z6 440 aa20.46■□□□□ 0.87
SLFNL1-201ENST00000302946 F6X3S4 739 aa20.46■□□□□ 0.87
SLFNL1-201ENST00000302946 HDGFL1Q5TGJ6 251 aa20.46■□□□□ 0.87
SLFNL1-201ENST00000302946 KCNQ3O43525 872 aa20.45■□□□□ 0.86
SLFNL1-201ENST00000302946 RBM25P49756 843 aaKnown RBP20.44■□□□□ 0.86
SLFNL1-201ENST00000302946 FLIIQ13045 1269 aa20.44■□□□□ 0.86
SLFNL1-201ENST00000302946 DDB1Q16531 1140 aa20.44■□□□□ 0.86
SLFNL1-201ENST00000302946 PLEKHM2Q8IWE5 1019 aa20.44■□□□□ 0.86
SLFNL1-201ENST00000302946 USP21Q9UK80 565 aa20.44■□□□□ 0.86
SLFNL1-201ENST00000302946 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
SLFNL1-201ENST00000302946 GIGYF1O75420 1035 aaPredicted RBP20.43■□□□□ 0.86
SLFNL1-201ENST00000302946 SLC4A10Q6U841 1118 aa20.43■□□□□ 0.86
SLFNL1-201ENST00000302946 PXDNLA1KZ92 1463 aa20.42■□□□□ 0.86
SLFNL1-201ENST00000302946 GSPT1P15170 499 aaKnown RBP20.42■□□□□ 0.86
SLFNL1-201ENST00000302946 FMNL2Q96PY5 1086 aa20.42■□□□□ 0.86
SLFNL1-201ENST00000302946 TBC1D9Q6ZT07 1266 aa20.41■□□□□ 0.86
SLFNL1-201ENST00000302946 TMOD3Q9NYL9 352 aa20.41■□□□□ 0.86
SLFNL1-201ENST00000302946 SLC39A6Q13433 755 aa20.4■□□□□ 0.86
SLFNL1-201ENST00000302946 FKBP5Q13451 457 aaPredicted RBP20.39■□□□□ 0.86
SLFNL1-201ENST00000302946 FBXO41Q8TF61 875 aa20.39■□□□□ 0.86
SLFNL1-201ENST00000302946 NECTIN2Q92692 538 aa20.39■□□□□ 0.86
SLFNL1-201ENST00000302946 C16orf71Q8IYS4 520 aaPredicted RBP20.39■□□□□ 0.85
SLFNL1-201ENST00000302946 SLKQ9H2G2 1235 aaPredicted RBP20.39■□□□□ 0.85
SLFNL1-201ENST00000302946 TOGARAM1Q9Y4F4 1720 aa20.38■□□□□ 0.85
SLFNL1-201ENST00000302946 PAPPAQ13219 1627 aa20.38■□□□□ 0.85
SLFNL1-201ENST00000302946 FRAT2O75474 233 aaPredicted RBP20.38■□□□□ 0.85
SLFNL1-201ENST00000302946 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
SLFNL1-201ENST00000302946 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
SLFNL1-201ENST00000302946 TTC22Q5TAA0 569 aa20.38■□□□□ 0.85
SLFNL1-201ENST00000302946 DBF4Q9UBU7 674 aaPredicted RBP20.38■□□□□ 0.85
SLFNL1-201ENST00000302946 CDC45O75419 566 aa20.37■□□□□ 0.85
SLFNL1-201ENST00000302946 OTUD7AQ8TE49 926 aaPredicted RBP20.37■□□□□ 0.85
SLFNL1-201ENST00000302946 ZNF496Q96IT1 587 aaPredicted RBP20.37■□□□□ 0.85
SLFNL1-201ENST00000302946 HMMRO75330 724 aa20.37■□□□□ 0.85
SLFNL1-201ENST00000302946 GNAI2P04899 355 aa20.37■□□□□ 0.85
SLFNL1-201ENST00000302946 AFF2P51816 1311 aa20.36■□□□□ 0.85
SLFNL1-201ENST00000302946 SMARCA5O60264 1052 aaPredicted RBP20.35■□□□□ 0.85
SLFNL1-201ENST00000302946 FAM98CQ17RN3 349 aaKnown RBP20.35■□□□□ 0.85
SLFNL1-201ENST00000302946 UBR2Q8IWV8 1755 aa20.34■□□□□ 0.85
SLFNL1-201ENST00000302946 KIF2CQ99661 725 aa20.34■□□□□ 0.85
SLFNL1-201ENST00000302946 CHPF2Q9P2E5 772 aa20.34■□□□□ 0.85
SLFNL1-201ENST00000302946 TRPC5Q9UL62 973 aaPredicted RBP20.34■□□□□ 0.85
SLFNL1-201ENST00000302946 GNAI3P08754 354 aa20.34■□□□□ 0.85
SLFNL1-201ENST00000302946 HYPKQ9NX55 129 aa20.34■□□□□ 0.85
SLFNL1-201ENST00000302946 BCL9O00512 1426 aa20.33■□□□□ 0.85
SLFNL1-201ENST00000302946 ATRNO75882 1429 aa20.33■□□□□ 0.85
SLFNL1-201ENST00000302946 KCPQ6ZWJ8 1503 aa20.33■□□□□ 0.84
SLFNL1-201ENST00000302946 SNX21Q969T3 373 aa20.32■□□□□ 0.84
SLFNL1-201ENST00000302946 PHAXQ9H814 394 aaKnown RBP20.32■□□□□ 0.84
SLFNL1-201ENST00000302946 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
SLFNL1-201ENST00000302946 ERBB4Q15303 1308 aa20.32■□□□□ 0.84
SLFNL1-201ENST00000302946 TUBGCP6Q96RT7 1819 aa20.32■□□□□ 0.84
SLFNL1-201ENST00000302946 APBB1O00213 710 aa20.32■□□□□ 0.84
SLFNL1-201ENST00000302946 PIGBQ92521 554 aa20.32■□□□□ 0.84
SLFNL1-201ENST00000302946 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
SLFNL1-201ENST00000302946 LAMB4A4D0S4 1761 aa20.32■□□□□ 0.84
SLFNL1-201ENST00000302946 GLI3P10071 1580 aa20.31■□□□□ 0.84
SLFNL1-201ENST00000302946 C5P01031 1676 aa20.31■□□□□ 0.84
SLFNL1-201ENST00000302946 THSD7AQ9UPZ6 1657 aa20.31■□□□□ 0.84
SLFNL1-201ENST00000302946 HSCBQ8IWL3 235 aa20.31■□□□□ 0.84
SLFNL1-201ENST00000302946 MARCH10Q8NA82 808 aaPredicted RBP20.31■□□□□ 0.84
SLFNL1-201ENST00000302946 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
SLFNL1-201ENST00000302946 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
SLFNL1-201ENST00000302946 ATP8B2P98198 1209 aa20.3■□□□□ 0.84
SLFNL1-201ENST00000302946 ITGB4P16144 1822 aa20.3■□□□□ 0.84
SLFNL1-201ENST00000302946 PNMA6EA0A0J9YXQ4 647 aa20.29■□□□□ 0.84
SLFNL1-201ENST00000302946 TEX13AQ9BXU3 409 aaPredicted RBP20.29■□□□□ 0.84
SLFNL1-201ENST00000302946 USP44Q9H0E7 712 aa20.29■□□□□ 0.84
SLFNL1-201ENST00000302946 OSBPL3Q9H4L5 887 aa20.29■□□□□ 0.84
SLFNL1-201ENST00000302946 DOT1LQ8TEK3 1739 aa20.29■□□□□ 0.84
SLFNL1-201ENST00000302946 A0A0G2JS52 829 aa20.28■□□□□ 0.84
SLFNL1-201ENST00000302946 SDSP20132 328 aa20.28■□□□□ 0.84
SLFNL1-201ENST00000302946 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
SLFNL1-201ENST00000302946 DDX58O95786 925 aaKnown RBP20.28■□□□□ 0.84
SLFNL1-201ENST00000302946 LRRFIP2Q9Y608 721 aaKnown RBP20.28■□□□□ 0.84
SLFNL1-201ENST00000302946 SALL3Q9BXA9 1300 aa20.28■□□□□ 0.84
SLFNL1-201ENST00000302946 IBTKQ9P2D0 1353 aaPredicted RBP20.28■□□□□ 0.84
SLFNL1-201ENST00000302946 SPRYD3Q8NCJ5 442 aa20.27■□□□□ 0.84
SLFNL1-201ENST00000302946 SYTL4Q96C24 671 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms