RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
CLP1-201ENST00000302731 PDIA6Q15084 440 aa13.22□□□□□ -0.29
CLP1-201ENST00000302731 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
CLP1-201ENST00000302731 UBTFL1P0CB47 393 aaPredicted RBP13.21□□□□□ -0.29
CLP1-201ENST00000302731 ATP8B2P98198 1209 aa13.21□□□□□ -0.29
CLP1-201ENST00000302731 BMP2KLQ5H9B9 411 aa13.21□□□□□ -0.29
CLP1-201ENST00000302731 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
CLP1-201ENST00000302731 GLI3P10071 1580 aa13.21□□□□□ -0.29
CLP1-201ENST00000302731 PAPPAQ13219 1627 aa13.21□□□□□ -0.29
CLP1-201ENST00000302731 LAMB4A4D0S4 1761 aa13.21□□□□□ -0.29
CLP1-201ENST00000302731 PRAMEF22A3QJZ6 481 aa13.21□□□□□ -0.3
CLP1-201ENST00000302731 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.3
CLP1-201ENST00000302731 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.3
CLP1-201ENST00000302731 TNS2Q63HR2 1409 aa13.2□□□□□ -0.3
CLP1-201ENST00000302731 PROSER3Q2NL68 480 aa13.2□□□□□ -0.3
CLP1-201ENST00000302731 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
CLP1-201ENST00000302731 MSH5O43196 834 aa13.19□□□□□ -0.3
CLP1-201ENST00000302731 ANXA1P04083 346 aa13.19□□□□□ -0.3
CLP1-201ENST00000302731 CDCA7Q9BWT1 371 aaPredicted RBP13.19□□□□□ -0.3
CLP1-201ENST00000302731 LRP6O75581 1613 aa13.19□□□□□ -0.3
CLP1-201ENST00000302731 LRP10Q7Z4F1 713 aa13.18□□□□□ -0.3
CLP1-201ENST00000302731 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
CLP1-201ENST00000302731 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
CLP1-201ENST00000302731 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
CLP1-201ENST00000302731 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
CLP1-201ENST00000302731 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
CLP1-201ENST00000302731 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
CLP1-201ENST00000302731 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
CLP1-201ENST00000302731 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
CLP1-201ENST00000302731 UPF2Q9HAU5 1272 aaKnown RBP13.17□□□□□ -0.3
CLP1-201ENST00000302731 UTYO14607 1347 aa13.17□□□□□ -0.3
CLP1-201ENST00000302731 WNK3Q9BYP7 1800 aa13.17□□□□□ -0.3
CLP1-201ENST00000302731 PLEKHM2Q8IWE5 1019 aa13.17□□□□□ -0.3
CLP1-201ENST00000302731 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
CLP1-201ENST00000302731 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
CLP1-201ENST00000302731 NWD2Q9ULI1 1742 aa13.16□□□□□ -0.3
CLP1-201ENST00000302731 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
CLP1-201ENST00000302731 EIF5BO60841 1220 aaKnown RBP13.16□□□□□ -0.3
CLP1-201ENST00000302731 MTX1Q13505 466 aa13.16□□□□□ -0.3
CLP1-201ENST00000302731 POLA2Q14181 598 aa13.16□□□□□ -0.3
CLP1-201ENST00000302731 USP35Q9P2H5 1018 aa13.16□□□□□ -0.3
CLP1-201ENST00000302731 PNMA6EA0A0J9YXQ4 647 aa13.15□□□□□ -0.3
CLP1-201ENST00000302731 NBPF7P0C2Y1 421 aaPredicted RBP13.15□□□□□ -0.3
CLP1-201ENST00000302731 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
CLP1-201ENST00000302731 METTL22Q9BUU2 404 aaPredicted RBP13.15□□□□□ -0.3
CLP1-201ENST00000302731 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
CLP1-201ENST00000302731 NOP58Q9Y2X3 529 aaKnown RBP13.15□□□□□ -0.3
CLP1-201ENST00000302731 EXOC5O00471 708 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 SEC24BO95487 1268 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 OSBPL3Q9H4L5 887 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
CLP1-201ENST00000302731 SLIT2O94813 1529 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 SPATA31A1Q5TZJ5 1347 aa13.14□□□□□ -0.31
CLP1-201ENST00000302731 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
CLP1-201ENST00000302731 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
CLP1-201ENST00000302731 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
CLP1-201ENST00000302731 GRM8O00222 908 aa13.13□□□□□ -0.31
CLP1-201ENST00000302731 MYL6BP14649 208 aa13.13□□□□□ -0.31
CLP1-201ENST00000302731 AIMP1Q12904 312 aaKnown RBP13.13□□□□□ -0.31
CLP1-201ENST00000302731 HSP90AB4PQ58FF6 505 aa13.13□□□□□ -0.31
CLP1-201ENST00000302731 TTC22Q5TAA0 569 aa13.13□□□□□ -0.31
CLP1-201ENST00000302731 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
CLP1-201ENST00000302731 TBC1D32Q96NH3 1257 aa13.13□□□□□ -0.31
CLP1-201ENST00000302731 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
CLP1-201ENST00000302731 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
CLP1-201ENST00000302731 COL15A1P39059 1388 aa13.12□□□□□ -0.31
CLP1-201ENST00000302731 BCL9O00512 1426 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 NEURL1BA8MQ27 555 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 SRGAP3O43295 1099 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 IGKV5-2P06315 115 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
CLP1-201ENST00000302731 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 EXOC6BQ9Y2D4 811 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 SPATA31A5Q5VU36 1347 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 SPATA31A7Q8IWB4 1347 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 SALL3Q9BXA9 1300 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 ITGB4P16144 1822 aa13.11□□□□□ -0.31
CLP1-201ENST00000302731 JCADQ9P266 1359 aa13.1□□□□□ -0.31
CLP1-201ENST00000302731 ERICH6Q7L0X2 663 aa13.1□□□□□ -0.31
CLP1-201ENST00000302731 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
CLP1-201ENST00000302731 PIGBQ92521 554 aa13.1□□□□□ -0.31
CLP1-201ENST00000302731 ARFGEF2Q9Y6D5 1785 aa13.1□□□□□ -0.31
CLP1-201ENST00000302731 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
CLP1-201ENST00000302731 SMARCA5O60264 1052 aaPredicted RBP13.1□□□□□ -0.31
CLP1-201ENST00000302731 CDC45O75419 566 aa13.1□□□□□ -0.31
CLP1-201ENST00000302731 GSPT1P15170 499 aaKnown RBP13.1□□□□□ -0.31
CLP1-201ENST00000302731 GCKRQ14397 625 aa13.1□□□□□ -0.31
CLP1-201ENST00000302731 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
CLP1-201ENST00000302731 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
CLP1-201ENST00000302731 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
CLP1-201ENST00000302731 AOX1Q06278 1338 aa13.09□□□□□ -0.31
CLP1-201ENST00000302731 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
CLP1-201ENST00000302731 PDE1AP54750 535 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms