RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 GOLGB1Q14789 3259 aaKnown RBP24.28■■□□□ 1.48
TMEM88-201ENST00000301599 VIRMAQ69YN4 1812 aaKnown RBP24.28■■□□□ 1.48
TMEM88-201ENST00000301599 HEG1Q9ULI3 1381 aa24.28■■□□□ 1.48
TMEM88-201ENST00000301599 A0A087WZG4 1122 aa24.26■■□□□ 1.47
TMEM88-201ENST00000301599 DPEP1P16444 411 aa24.26■■□□□ 1.47
TMEM88-201ENST00000301599 DDR1Q08345 913 aa24.26■■□□□ 1.47
TMEM88-201ENST00000301599 C10orf71Q711Q0 1435 aa24.26■■□□□ 1.47
TMEM88-201ENST00000301599 EIF5P55010 431 aaKnown RBP24.25■■□□□ 1.47
TMEM88-201ENST00000301599 MCM10Q7L590 875 aa24.25■■□□□ 1.47
TMEM88-201ENST00000301599 COL15A1P39059 1388 aa24.25■■□□□ 1.47
TMEM88-201ENST00000301599 C4AP0C0L4 1744 aa24.24■■□□□ 1.47
TMEM88-201ENST00000301599 POLRMTO00411 1230 aaKnown RBP24.24■■□□□ 1.47
TMEM88-201ENST00000301599 PNNQ9H307 717 aaKnown RBP24.24■■□□□ 1.47
TMEM88-201ENST00000301599 BCS1LQ9Y276 419 aa24.24■■□□□ 1.47
TMEM88-201ENST00000301599 PXDNLA1KZ92 1463 aa24.24■■□□□ 1.47
TMEM88-201ENST00000301599 KCNQ3O43525 872 aa24.23■■□□□ 1.47
TMEM88-201ENST00000301599 RALBP1Q15311 655 aa24.23■■□□□ 1.47
TMEM88-201ENST00000301599 NPM2Q86SE8 214 aaKnown RBP24.22■■□□□ 1.47
TMEM88-201ENST00000301599 KCNA3P22001 575 aa24.21■■□□□ 1.47
TMEM88-201ENST00000301599 IL6STP40189 918 aaPredicted RBP24.21■■□□□ 1.47
TMEM88-201ENST00000301599 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
TMEM88-201ENST00000301599 DCTN1Q14203 1278 aa24.21■■□□□ 1.47
TMEM88-201ENST00000301599 NFIXQ14938 502 aa24.21■■□□□ 1.47
TMEM88-201ENST00000301599 BCL2L12Q9HB09 334 aa24.21■■□□□ 1.47
TMEM88-201ENST00000301599 PIM2Q9P1W9 311 aa24.21■■□□□ 1.47
TMEM88-201ENST00000301599 UBR2Q8IWV8 1755 aa24.21■■□□□ 1.47
TMEM88-201ENST00000301599 KIF13BQ9NQT8 1826 aa24.2■■□□□ 1.46
TMEM88-201ENST00000301599 A1BGP04217 495 aa24.2■■□□□ 1.46
TMEM88-201ENST00000301599 TAF7Q15545 349 aaPredicted RBP24.2■■□□□ 1.46
TMEM88-201ENST00000301599 SERPINB2P05120 415 aa24.18■■□□□ 1.46
TMEM88-201ENST00000301599 SNRPA1P09661 255 aaKnown RBP24.18■■□□□ 1.46
TMEM88-201ENST00000301599 ARHGAP27Q6ZUM4 889 aa24.18■■□□□ 1.46
TMEM88-201ENST00000301599 PLEKHF1Q96S99 279 aa24.18■■□□□ 1.46
TMEM88-201ENST00000301599 ZNF330Q9Y3S2 320 aaPredicted RBP24.18■■□□□ 1.46
TMEM88-201ENST00000301599 USP16Q9Y5T5 823 aa24.18■■□□□ 1.46
TMEM88-201ENST00000301599 SIPA1L3O60292 1781 aaPredicted RBP24.17■■□□□ 1.46
TMEM88-201ENST00000301599 GIGYF1O75420 1035 aaPredicted RBP24.17■■□□□ 1.46
TMEM88-201ENST00000301599 TBC1D2BQ9UPU7 963 aa24.17■■□□□ 1.46
TMEM88-201ENST00000301599 C1QTNF8P60827 252 aa24.16■■□□□ 1.46
TMEM88-201ENST00000301599 DALRD3Q5D0E6 543 aaKnown RBP24.16■■□□□ 1.46
TMEM88-201ENST00000301599 BICDL1Q6ZP65 573 aa24.15■■□□□ 1.46
TMEM88-201ENST00000301599 N4BP2Q86UW6 1770 aaPredicted RBP24.15■■□□□ 1.46
TMEM88-201ENST00000301599 CHRNA5P30532 468 aa24.14■■□□□ 1.45
TMEM88-201ENST00000301599 NFE2L2Q16236 605 aa24.14■■□□□ 1.45
TMEM88-201ENST00000301599 PNISRQ8TF01 805 aaKnown RBP24.14■■□□□ 1.45
TMEM88-201ENST00000301599 ATP10DQ9P241 1426 aa24.14■■□□□ 1.45
TMEM88-201ENST00000301599 MAPK8IP3Q9UPT6 1336 aa24.13■■□□□ 1.45
TMEM88-201ENST00000301599 GPBP1L1Q9HC44 474 aaPredicted RBP24.13■■□□□ 1.45
TMEM88-201ENST00000301599 MIS18AQ9NYP9 233 aa24.13■■□□□ 1.45
TMEM88-201ENST00000301599 KIAA1551Q9HCM1 1747 aa24.13■■□□□ 1.45
TMEM88-201ENST00000301599 PRAMEF22A3QJZ6 481 aa24.11■■□□□ 1.45
TMEM88-201ENST00000301599 TBC1D9BQ66K14 1250 aa24.11■■□□□ 1.45
TMEM88-201ENST00000301599 DZIP3Q86Y13 1208 aaKnown RBP24.1■■□□□ 1.45
TMEM88-201ENST00000301599 ADCY9O60503 1353 aa24.1■■□□□ 1.45
TMEM88-201ENST00000301599 CAMTA2O94983 1202 aa24.09■■□□□ 1.45
TMEM88-201ENST00000301599 SETDB2Q96T68 719 aa24.09■■□□□ 1.45
TMEM88-201ENST00000301599 ZNF526Q8TF50 670 aaPredicted RBP24.08■■□□□ 1.45
TMEM88-201ENST00000301599 MYBBP1AQ9BQG0 1328 aaKnown RBP24.08■■□□□ 1.44
TMEM88-201ENST00000301599 H0YIN7 160 aa24.07■■□□□ 1.44
TMEM88-201ENST00000301599 PIP4K2AP48426 406 aaPredicted RBP24.07■■□□□ 1.44
TMEM88-201ENST00000301599 CLEC4GQ6UXB4 293 aa24.06■■□□□ 1.44
TMEM88-201ENST00000301599 C2CD5Q86YS7 1000 aa24.06■■□□□ 1.44
TMEM88-201ENST00000301599 PDZRN3Q9UPQ7 1066 aa24.06■■□□□ 1.44
TMEM88-201ENST00000301599 RIPK4P57078 832 aa24.05■■□□□ 1.44
TMEM88-201ENST00000301599 TTLL6Q8N841 843 aa24.05■■□□□ 1.44
TMEM88-201ENST00000301599 BRIP1Q9BX63 1249 aa24.05■■□□□ 1.44
TMEM88-201ENST00000301599 NBPF26B4DH59 902 aa24.04■■□□□ 1.44
TMEM88-201ENST00000301599 PDE6BP35913 854 aa24.04■■□□□ 1.44
TMEM88-201ENST00000301599 EIF4A1P60842 406 aaKnown RBP24.04■■□□□ 1.44
TMEM88-201ENST00000301599 NBPF10Q6P3W6 841 aaKnown RBP24.04■■□□□ 1.44
TMEM88-201ENST00000301599 NBPF15Q8N660 670 aa24.04■■□□□ 1.44
TMEM88-201ENST00000301599 THUMPD2Q9BTF0 503 aaKnown RBP24.04■■□□□ 1.44
TMEM88-201ENST00000301599 ZNF652Q9Y2D9 606 aa24.04■■□□□ 1.44
TMEM88-201ENST00000301599 CARMIL3Q8ND23 1372 aa24.03■■□□□ 1.44
TMEM88-201ENST00000301599 PRR5LQ6MZQ0 368 aa24.03■■□□□ 1.44
TMEM88-201ENST00000301599 AFDNP55196 1824 aaKnown RBP24.03■■□□□ 1.44
TMEM88-201ENST00000301599 NRXN2Q9P2S2 1712 aa24.02■■□□□ 1.44
TMEM88-201ENST00000301599 RGL2O15211 777 aa24.02■■□□□ 1.44
TMEM88-201ENST00000301599 NPHP1O15259 732 aa24.02■■□□□ 1.44
TMEM88-201ENST00000301599 C9orf131Q5VYM1 1079 aa24.02■■□□□ 1.44
TMEM88-201ENST00000301599 BRCA1P38398 1863 aaKnown RBP24.02■■□□□ 1.44
TMEM88-201ENST00000301599 SENP3-EIF4A1A0A087X0R7 540 aa24.01■■□□□ 1.43
TMEM88-201ENST00000301599 TMPOP42166 694 aaKnown RBP24■■□□□ 1.43
TMEM88-201ENST00000301599 LMOD3Q0VAK6 560 aa24■■□□□ 1.43
TMEM88-201ENST00000301599 CNBD1Q8NA66 436 aa24■■□□□ 1.43
TMEM88-201ENST00000301599 ST5P78524 1137 aa23.99■■□□□ 1.43
TMEM88-201ENST00000301599 WDR43Q15061 677 aaKnown RBP eCLIP23.99■■□□□ 1.43
TMEM88-201ENST00000301599 CCDC24Q8N4L8 307 aa23.99■■□□□ 1.43
TMEM88-201ENST00000301599 ZNF622Q969S3 477 aaKnown RBP eCLIP23.99■■□□□ 1.43
TMEM88-201ENST00000301599 ARFGEF1Q9Y6D6 1849 aa23.98■■□□□ 1.43
TMEM88-201ENST00000301599 DLG5Q8TDM6 1919 aa23.98■■□□□ 1.43
TMEM88-201ENST00000301599 BABAM1Q9NWV8 329 aa23.98■■□□□ 1.43
TMEM88-201ENST00000301599 NBPF5PQ86XG9 351 aaPredicted RBP23.97■■□□□ 1.43
TMEM88-201ENST00000301599 PRKRIP1Q9H875 184 aaPredicted RBP23.97■■□□□ 1.43
TMEM88-201ENST00000301599 RNF181Q9P0P0 153 aa23.97■■□□□ 1.43
TMEM88-201ENST00000301599 TSPYL4Q9UJ04 414 aa23.97■■□□□ 1.43
TMEM88-201ENST00000301599 RRP7AQ9Y3A4 280 aaKnown RBP23.97■■□□□ 1.43
TMEM88-201ENST00000301599 ZEB1P37275 1124 aaPredicted RBP23.96■■□□□ 1.43
TMEM88-201ENST00000301599 TPTE2Q6XPS3 522 aa23.96■■□□□ 1.43
TMEM88-201ENST00000301599 RUNDC1Q96C34 613 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms