RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 VAMP4O75379 141 aa22.64■■□□□ 1.22
TSR1-201ENST00000301364 C8orf58Q8NAV2 365 aa22.64■■□□□ 1.22
TSR1-201ENST00000301364 UBAC1Q9BSL1 405 aa22.64■■□□□ 1.22
TSR1-201ENST00000301364 LRSAM1Q6UWE0 723 aa22.64■■□□□ 1.22
TSR1-201ENST00000301364 NUP133Q8WUM0 1156 aa22.64■■□□□ 1.22
TSR1-201ENST00000301364 DCTPP1Q9H773 170 aa22.64■■□□□ 1.21
TSR1-201ENST00000301364 POLKQ9UBT6 870 aa22.64■■□□□ 1.21
TSR1-201ENST00000301364 GJB2P29033 226 aa22.64■■□□□ 1.21
TSR1-201ENST00000301364 CDK5RAP3Q96JB5 506 aa22.64■■□□□ 1.21
TSR1-201ENST00000301364 MPRIPQ6WCQ1 1025 aa22.63■■□□□ 1.21
TSR1-201ENST00000301364 GDPD2Q9HCC8 539 aa22.63■■□□□ 1.21
TSR1-201ENST00000301364 MTMR7Q9Y216 660 aa22.63■■□□□ 1.21
TSR1-201ENST00000301364 IFIT1P09914 478 aaKnown RBP22.63■■□□□ 1.21
TSR1-201ENST00000301364 SFPQP23246 707 aaKnown RBP eCLIP22.63■■□□□ 1.21
TSR1-201ENST00000301364 TDO2P48775 406 aa22.63■■□□□ 1.21
TSR1-201ENST00000301364 RHPN1Q8TCX5 695 aa22.63■■□□□ 1.21
TSR1-201ENST00000301364 SPINK5Q9NQ38 1064 aaPredicted RBP22.63■■□□□ 1.21
TSR1-201ENST00000301364 KIF21AQ7Z4S6 1674 aa22.63■■□□□ 1.21
TSR1-201ENST00000301364 PTPN14Q15678 1187 aa22.62■■□□□ 1.21
TSR1-201ENST00000301364 CAVIN2O95810 425 aa22.62■■□□□ 1.21
TSR1-201ENST00000301364 HMG20BQ9P0W2 317 aa22.62■■□□□ 1.21
TSR1-201ENST00000301364 CTDP1Q9Y5B0 961 aaPredicted RBP22.62■■□□□ 1.21
TSR1-201ENST00000301364 FBLN1P23142 703 aa22.62■■□□□ 1.21
TSR1-201ENST00000301364 ESYT1Q9BSJ8 1104 aa22.62■■□□□ 1.21
TSR1-201ENST00000301364 PI4KAP2A4QPH2 592 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 ERLIN1O75477 346 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 IDH1O75874 414 aaKnown RBP22.61■■□□□ 1.21
TSR1-201ENST00000301364 RAB3GAP1Q15042 981 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 PI4KAP1Q8N8J0 262 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 NEMFO60524 1076 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 AIDAQ96BJ3 306 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 CCDC43Q96MW1 224 aaKnown RBP22.61■■□□□ 1.21
TSR1-201ENST00000301364 CEP131Q9UPN4 1083 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 TTC21AQ8NDW8 1320 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 CFAP100Q494V2 611 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 C8orf76Q96K31 380 aa22.61■■□□□ 1.21
TSR1-201ENST00000301364 PDCL3Q9H2J4 239 aa22.6■■□□□ 1.21
TSR1-201ENST00000301364 ZNF518AQ6AHZ1 1483 aa22.6■■□□□ 1.21
TSR1-201ENST00000301364 SEC24BO95487 1268 aa22.6■■□□□ 1.21
TSR1-201ENST00000301364 RBM27Q9P2N5 1060 aaKnown RBP22.6■■□□□ 1.21
TSR1-201ENST00000301364 ZFYVE9O95405 1425 aa22.6■■□□□ 1.21
TSR1-201ENST00000301364 TSHZ3Q63HK5 1081 aa22.6■■□□□ 1.21
TSR1-201ENST00000301364 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
TSR1-201ENST00000301364 MAP3K2Q9Y2U5 619 aa22.6■■□□□ 1.21
TSR1-201ENST00000301364 ADCY5O95622 1261 aa22.59■■□□□ 1.21
TSR1-201ENST00000301364 STARD3NLO95772 234 aa22.59■■□□□ 1.21
TSR1-201ENST00000301364 METTL24Q5JXM2 366 aa22.59■■□□□ 1.21
TSR1-201ENST00000301364 BLMP54132 1417 aaPredicted RBP22.59■■□□□ 1.21
TSR1-201ENST00000301364 ZSCAN22P10073 491 aaPredicted RBP22.59■■□□□ 1.21
TSR1-201ENST00000301364 HSP90AB2PQ58FF8 381 aa22.59■■□□□ 1.21
TSR1-201ENST00000301364 CLIP2Q9UDT6 1046 aa22.59■■□□□ 1.21
TSR1-201ENST00000301364 CCAR1Q8IX12 1150 aaKnown RBP22.59■■□□□ 1.21
TSR1-201ENST00000301364 UBXN4Q92575 508 aa22.59■■□□□ 1.21
TSR1-201ENST00000301364 KIF18AQ8NI77 898 aa22.58■■□□□ 1.21
TSR1-201ENST00000301364 LEKR1Q6ZMV7 388 aa22.58■■□□□ 1.21
TSR1-201ENST00000301364 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
TSR1-201ENST00000301364 CKAP2LQ8IYA6 745 aa22.58■■□□□ 1.2
TSR1-201ENST00000301364 FAM177A1Q8N128 213 aaPredicted RBP22.58■■□□□ 1.2
TSR1-201ENST00000301364 LUC7LQ9NQ29 371 aaKnown RBP22.58■■□□□ 1.2
TSR1-201ENST00000301364 NCBP3Q53F19 620 aaKnown RBP22.57■■□□□ 1.2
TSR1-201ENST00000301364 TXLNBQ8N3L3 684 aa22.57■■□□□ 1.2
TSR1-201ENST00000301364 PPIP5K1Q6PFW1 1433 aa22.56■■□□□ 1.2
TSR1-201ENST00000301364 A0A087WZG4 1122 aa22.56■■□□□ 1.2
TSR1-201ENST00000301364 EIF3JO75822 258 aaKnown RBP22.56■■□□□ 1.2
TSR1-201ENST00000301364 LARP6Q9BRS8 491 aaKnown RBP22.56■■□□□ 1.2
TSR1-201ENST00000301364 LRP2BPQ9P2M1 347 aa22.56■■□□□ 1.2
TSR1-201ENST00000301364 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
TSR1-201ENST00000301364 ZSCAN12O43309 604 aa22.55■■□□□ 1.2
TSR1-201ENST00000301364 SAMD9Q5K651 1589 aa22.55■■□□□ 1.2
TSR1-201ENST00000301364 CEP85Q6P2H3 762 aa22.55■■□□□ 1.2
TSR1-201ENST00000301364 DISP1Q96F81 1524 aa22.55■■□□□ 1.2
TSR1-201ENST00000301364 STK11IPQ8N1F8 1099 aa22.55■■□□□ 1.2
TSR1-201ENST00000301364 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
TSR1-201ENST00000301364 NEK1Q96PY6 1258 aa22.55■■□□□ 1.2
TSR1-201ENST00000301364 TFIP11Q9UBB9 837 aaKnown RBP22.55■■□□□ 1.2
TSR1-201ENST00000301364 MYO6Q9UM54 1294 aa22.55■■□□□ 1.2
TSR1-201ENST00000301364 EIF4A2Q14240 407 aaKnown RBP22.54■■□□□ 1.2
TSR1-201ENST00000301364 PANK2Q9BZ23 570 aa22.54■■□□□ 1.2
TSR1-201ENST00000301364 PLEKHM2Q8IWE5 1019 aa22.54■■□□□ 1.2
TSR1-201ENST00000301364 CCDC85AQ96PX6 553 aaPredicted RBP22.54■■□□□ 1.2
TSR1-201ENST00000301364 A0A1W2PP64 1363 aa22.54■■□□□ 1.2
TSR1-201ENST00000301364 IGHMBP2P38935 993 aaKnown RBP22.54■■□□□ 1.2
TSR1-201ENST00000301364 RBM25P49756 843 aaKnown RBP22.54■■□□□ 1.2
TSR1-201ENST00000301364 ZNF165P49910 485 aa22.54■■□□□ 1.2
TSR1-201ENST00000301364 GSDMDP57764 484 aa22.53■■□□□ 1.2
TSR1-201ENST00000301364 C16orf71Q8IYS4 520 aaPredicted RBP22.53■■□□□ 1.2
TSR1-201ENST00000301364 ZSCAN16Q9H4T2 348 aaPredicted RBP22.53■■□□□ 1.2
TSR1-201ENST00000301364 ZNF213O14771 459 aa22.53■■□□□ 1.2
TSR1-201ENST00000301364 PRIMPOLQ96LW4 560 aa22.53■■□□□ 1.2
TSR1-201ENST00000301364 RAI14Q9P0K7 980 aa22.53■■□□□ 1.2
TSR1-201ENST00000301364 IFIT5Q13325 482 aaKnown RBP22.53■■□□□ 1.2
TSR1-201ENST00000301364 STX1AQ16623 288 aa22.53■■□□□ 1.2
TSR1-201ENST00000301364 CT47A1Q5JQC4 288 aaPredicted RBP22.53■■□□□ 1.2
TSR1-201ENST00000301364 SOGA3Q5TF21 947 aa22.53■■□□□ 1.2
TSR1-201ENST00000301364 FSIP1Q8NA03 581 aa22.53■■□□□ 1.2
TSR1-201ENST00000301364 PKNOX2Q96KN3 472 aa22.53■■□□□ 1.2
TSR1-201ENST00000301364 WDR7Q9Y4E6 1490 aa22.52■■□□□ 1.2
TSR1-201ENST00000301364 ASXL2Q76L83 1435 aa22.52■■□□□ 1.2
TSR1-201ENST00000301364 ABCC10Q5T3U5 1492 aa22.52■■□□□ 1.2
TSR1-201ENST00000301364 ZBTB7BO15156 539 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms