RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 FAM200AQ8TCP9 573 aa15.55■□□□□ 0.08
TVP23A-201ENST00000299866 CHD1O14646 1710 aa15.55■□□□□ 0.08
TVP23A-201ENST00000299866 SMTNL1A8MU46 457 aa15.55■□□□□ 0.08
TVP23A-201ENST00000299866 FAM173BQ6P4H8 233 aa15.54■□□□□ 0.08
TVP23A-201ENST00000299866 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
TVP23A-201ENST00000299866 COG3Q96JB2 828 aa15.54■□□□□ 0.08
TVP23A-201ENST00000299866 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.54■□□□□ 0.08
TVP23A-201ENST00000299866 V9GYY5 206 aaPredicted RBP15.54■□□□□ 0.08
TVP23A-201ENST00000299866 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
TVP23A-201ENST00000299866 ANKRD26Q9UPS8 1709 aa15.54■□□□□ 0.08
TVP23A-201ENST00000299866 TYRO3Q06418 890 aa15.54■□□□□ 0.08
TVP23A-201ENST00000299866 SPG7Q9UQ90 795 aa15.54■□□□□ 0.08
TVP23A-201ENST00000299866 KIAA0232Q92628 1395 aa15.54■□□□□ 0.08
TVP23A-201ENST00000299866 CASTP20810 708 aaKnown RBP15.53■□□□□ 0.08
TVP23A-201ENST00000299866 MAP3K11Q16584 847 aa15.53■□□□□ 0.08
TVP23A-201ENST00000299866 MTMR6Q9Y217 621 aa15.53■□□□□ 0.08
TVP23A-201ENST00000299866 CPSF1Q10570 1443 aaKnown RBP15.53■□□□□ 0.08
TVP23A-201ENST00000299866 PTPRMP28827 1452 aa15.53■□□□□ 0.08
TVP23A-201ENST00000299866 LIG1P18858 919 aa15.53■□□□□ 0.08
TVP23A-201ENST00000299866 TTC14Q96N46 770 aa15.53■□□□□ 0.08
TVP23A-201ENST00000299866 NUP62CLQ9H1M0 184 aa15.53■□□□□ 0.08
TVP23A-201ENST00000299866 TMEM51Q9NW97 253 aa15.53■□□□□ 0.08
TVP23A-201ENST00000299866 VGLL3A8MV65 326 aa15.53■□□□□ 0.08
TVP23A-201ENST00000299866 MRVI1Q9Y6F6 885 aa15.53■□□□□ 0.08
TVP23A-201ENST00000299866 SSH2Q76I76 1423 aa15.52■□□□□ 0.08
TVP23A-201ENST00000299866 NEXMIFQ5QGS0 1516 aa15.52■□□□□ 0.08
TVP23A-201ENST00000299866 ANO6Q4KMQ2 910 aa15.52■□□□□ 0.08
TVP23A-201ENST00000299866 TAF3Q5VWG9 929 aa15.52■□□□□ 0.08
TVP23A-201ENST00000299866 CWC27Q6UX04 472 aaKnown RBP15.52■□□□□ 0.08
TVP23A-201ENST00000299866 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.08
TVP23A-201ENST00000299866 LRRFIP2Q9Y608 721 aaKnown RBP15.52■□□□□ 0.08
TVP23A-201ENST00000299866 SLFN14P0C7P3 912 aa15.52■□□□□ 0.07
TVP23A-201ENST00000299866 ATP8B2P98198 1209 aa15.52■□□□□ 0.07
TVP23A-201ENST00000299866 MAP2P11137 1827 aaKnown RBP15.52■□□□□ 0.07
TVP23A-201ENST00000299866 GABPB1Q06547 395 aaPredicted RBP15.52■□□□□ 0.07
TVP23A-201ENST00000299866 NECAB1Q8N987 351 aa15.52■□□□□ 0.07
TVP23A-201ENST00000299866 CBX8Q9HC52 389 aa15.52■□□□□ 0.07
TVP23A-201ENST00000299866 STAP2Q9UGK3 403 aa15.52■□□□□ 0.07
TVP23A-201ENST00000299866 NCKAP5LQ9HCH0 1330 aa15.52■□□□□ 0.07
TVP23A-201ENST00000299866 ZSCAN25Q6NSZ9 544 aa15.51■□□□□ 0.07
TVP23A-201ENST00000299866 TSPYL4Q9UJ04 414 aa15.51■□□□□ 0.07
TVP23A-201ENST00000299866 KCNJ4P48050 445 aa15.51■□□□□ 0.07
TVP23A-201ENST00000299866 RTF1Q92541 710 aaKnown RBP15.51■□□□□ 0.07
TVP23A-201ENST00000299866 KIDINS220Q9ULH0 1771 aa15.51■□□□□ 0.07
TVP23A-201ENST00000299866 RAD50Q92878 1312 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 ERICH4A6NGS2 130 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 SOX12O15370 315 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 SGSM2O43147 1006 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 TTC6Q86TZ1 520 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 TNMDQ9H2S6 317 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 UHRF1BP1LA0JNW5 1464 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 GOLGA6L4A6NEF3 574 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 POGZQ7Z3K3 1410 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 GNAI3P08754 354 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
TVP23A-201ENST00000299866 KIF18AQ8NI77 898 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 JAKMIP1Q96N16 626 aaKnown RBP15.5■□□□□ 0.07
TVP23A-201ENST00000299866 DACT1Q9NYF0 836 aa15.5■□□□□ 0.07
TVP23A-201ENST00000299866 TFIP11Q9UBB9 837 aaKnown RBP15.5■□□□□ 0.07
TVP23A-201ENST00000299866 DLG5Q8TDM6 1919 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.49■□□□□ 0.07
TVP23A-201ENST00000299866 NPHP1O15259 732 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 ZNF75DP51815 510 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 CACTINQ8WUQ7 758 aaKnown RBP15.49■□□□□ 0.07
TVP23A-201ENST00000299866 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 FOXO3O43524 673 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 CDK11BP21127 795 aaKnown RBP15.49■□□□□ 0.07
TVP23A-201ENST00000299866 EIF4A2Q14240 407 aaKnown RBP15.49■□□□□ 0.07
TVP23A-201ENST00000299866 IL17RAQ96F46 866 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 LSG1Q9H089 658 aaKnown RBP15.49■□□□□ 0.07
TVP23A-201ENST00000299866 PDRG1Q9NUG6 133 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 SURF6O75683 361 aaKnown RBP15.49■□□□□ 0.07
TVP23A-201ENST00000299866 CEP135Q66GS9 1140 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 CLIP2Q9UDT6 1046 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 PAXBP1Q9Y5B6 917 aa15.49■□□□□ 0.07
TVP23A-201ENST00000299866 ASXL2Q76L83 1435 aa15.48■□□□□ 0.07
TVP23A-201ENST00000299866 ABCA9Q8IUA7 1624 aa15.48■□□□□ 0.07
TVP23A-201ENST00000299866 LARP1BQ659C4 914 aaKnown RBP15.48■□□□□ 0.07
TVP23A-201ENST00000299866 HYPKQ9NX55 129 aa15.48■□□□□ 0.07
TVP23A-201ENST00000299866 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
TVP23A-201ENST00000299866 MORC2Q9Y6X9 1032 aaPredicted RBP15.48■□□□□ 0.07
TVP23A-201ENST00000299866 KRT85P78386 507 aa15.48■□□□□ 0.07
TVP23A-201ENST00000299866 SYCP1Q15431 976 aa15.48■□□□□ 0.07
TVP23A-201ENST00000299866 ADCK5Q3MIX3 580 aa15.48■□□□□ 0.07
TVP23A-201ENST00000299866 KIF20BQ96Q89 1820 aa15.48■□□□□ 0.07
TVP23A-201ENST00000299866 TERF2Q15554 542 aa15.47■□□□□ 0.07
TVP23A-201ENST00000299866 KRT222Q8N1A0 295 aa15.47■□□□□ 0.07
TVP23A-201ENST00000299866 CCDC144BQ3MJ40 725 aa15.47■□□□□ 0.07
TVP23A-201ENST00000299866 CCDC144CPQ8IYA2 1237 aa15.47■□□□□ 0.07
TVP23A-201ENST00000299866 DNAJC25Q9H1X3 360 aa15.47■□□□□ 0.07
TVP23A-201ENST00000299866 ZNF215Q9UL58 517 aaPredicted RBP15.47■□□□□ 0.07
TVP23A-201ENST00000299866 ARID5BQ14865 1188 aa15.47■□□□□ 0.07
TVP23A-201ENST00000299866 PRPF40BQ6NWY9 871 aaKnown RBP15.47■□□□□ 0.07
TVP23A-201ENST00000299866 FLIIQ13045 1269 aa15.46■□□□□ 0.07
TVP23A-201ENST00000299866 KMT5BQ4FZB7 885 aa15.46■□□□□ 0.07
TVP23A-201ENST00000299866 CDC37L1Q7L3B6 337 aa15.46■□□□□ 0.07
TVP23A-201ENST00000299866 CDK12Q9NYV4 1490 aaPredicted RBP15.46■□□□□ 0.07
TVP23A-201ENST00000299866 ZNF165P49910 485 aa15.46■□□□□ 0.07
TVP23A-201ENST00000299866 PDE4CQ08493 712 aa15.46■□□□□ 0.07
TVP23A-201ENST00000299866 ST7Q9NRC1 585 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms