RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 COL5A3P25940 1745 aaPredicted RBP13.82□□□□□ -0.2
VWA3A-201ENST00000299840 WDR43Q15061 677 aaKnown RBP eCLIP13.82□□□□□ -0.2
VWA3A-201ENST00000299840 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
VWA3A-201ENST00000299840 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
VWA3A-201ENST00000299840 TMEM51Q9NW97 253 aa13.82□□□□□ -0.2
VWA3A-201ENST00000299840 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
VWA3A-201ENST00000299840 RRAGDQ9NQL2 400 aaPredicted RBP13.81□□□□□ -0.2
VWA3A-201ENST00000299840 CCNL1Q9UK58 526 aaPredicted RBP13.81□□□□□ -0.2
VWA3A-201ENST00000299840 NFE2L2Q16236 605 aa13.81□□□□□ -0.2
VWA3A-201ENST00000299840 C4BP0C0L5 1744 aa13.8□□□□□ -0.2
VWA3A-201ENST00000299840 AKT1S1Q96B36 256 aa13.8□□□□□ -0.2
VWA3A-201ENST00000299840 STK32BQ9NY57 414 aa13.8□□□□□ -0.2
VWA3A-201ENST00000299840 SLC15A2Q16348 729 aa13.8□□□□□ -0.2
VWA3A-201ENST00000299840 ADAMTS8Q9UP79 889 aa13.8□□□□□ -0.2
VWA3A-201ENST00000299840 MAPK8IP3Q9UPT6 1336 aa13.79□□□□□ -0.2
VWA3A-201ENST00000299840 TJP1Q07157 1748 aa13.79□□□□□ -0.2
VWA3A-201ENST00000299840 UBR3Q6ZT12 1888 aa13.79□□□□□ -0.2
VWA3A-201ENST00000299840 LOC102724428A0A0B4J2F2 783 aa13.79□□□□□ -0.2
VWA3A-201ENST00000299840 SIK1P57059 783 aa13.79□□□□□ -0.2
VWA3A-201ENST00000299840 R3HDM1Q15032 1099 aaKnown RBP13.79□□□□□ -0.2
VWA3A-201ENST00000299840 PRDM10Q9NQV6 1147 aa13.79□□□□□ -0.2
VWA3A-201ENST00000299840 CCDC184Q52MB2 194 aa13.79□□□□□ -0.2
VWA3A-201ENST00000299840 RUNDC1Q96C34 613 aa13.79□□□□□ -0.2
VWA3A-201ENST00000299840 RTF1Q92541 710 aaKnown RBP13.78□□□□□ -0.2
VWA3A-201ENST00000299840 KCPQ6ZWJ8 1503 aa13.78□□□□□ -0.2
VWA3A-201ENST00000299840 COL24A1Q17RW2 1714 aa13.78□□□□□ -0.2
VWA3A-201ENST00000299840 LRP5O75197 1615 aa13.78□□□□□ -0.2
VWA3A-201ENST00000299840 PSDA5PKW4 1024 aaPredicted RBP13.77□□□□□ -0.21
VWA3A-201ENST00000299840 TEFQ10587 303 aa13.77□□□□□ -0.21
VWA3A-201ENST00000299840 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
VWA3A-201ENST00000299840 FRAT1Q92837 279 aaPredicted RBP13.77□□□□□ -0.21
VWA3A-201ENST00000299840 MYH14Q7Z406 1995 aaKnown RBP13.77□□□□□ -0.21
VWA3A-201ENST00000299840 KDM3BQ7LBC6 1761 aa13.77□□□□□ -0.21
VWA3A-201ENST00000299840 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
VWA3A-201ENST00000299840 TMPOP42166 694 aaKnown RBP13.76□□□□□ -0.21
VWA3A-201ENST00000299840 RGS22Q8NE09 1264 aa13.76□□□□□ -0.21
VWA3A-201ENST00000299840 SLC4A9Q96Q91 983 aa13.76□□□□□ -0.21
VWA3A-201ENST00000299840 KCNQ4P56696 695 aa13.75□□□□□ -0.21
VWA3A-201ENST00000299840 VGLL3A8MV65 326 aa13.75□□□□□ -0.21
VWA3A-201ENST00000299840 ATP6V1AP38606 617 aa13.75□□□□□ -0.21
VWA3A-201ENST00000299840 ITPK1Q13572 414 aa13.75□□□□□ -0.21
VWA3A-201ENST00000299840 MCM10Q7L590 875 aa13.74□□□□□ -0.21
VWA3A-201ENST00000299840 MRS2Q9HD23 443 aa13.74□□□□□ -0.21
VWA3A-201ENST00000299840 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
VWA3A-201ENST00000299840 LMOD3Q0VAK6 560 aa13.74□□□□□ -0.21
VWA3A-201ENST00000299840 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
VWA3A-201ENST00000299840 SMAP1Q8IYB5 467 aaPredicted RBP13.74□□□□□ -0.21
VWA3A-201ENST00000299840 LINC00116Q8NCU8 138 aa13.74□□□□□ -0.21
VWA3A-201ENST00000299840 RIPK4P57078 832 aa13.73□□□□□ -0.21
VWA3A-201ENST00000299840 CCDC146Q8IYE0 955 aa13.73□□□□□ -0.21
VWA3A-201ENST00000299840 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
VWA3A-201ENST00000299840 TAF7Q15545 349 aaPredicted RBP13.73□□□□□ -0.21
VWA3A-201ENST00000299840 CNTNAP4Q9C0A0 1308 aa13.73□□□□□ -0.21
VWA3A-201ENST00000299840 SLC39A6Q13433 755 aa13.72□□□□□ -0.21
VWA3A-201ENST00000299840 DCTN1Q14203 1278 aa13.72□□□□□ -0.21
VWA3A-201ENST00000299840 ZNF790Q6PG37 636 aa13.72□□□□□ -0.21
VWA3A-201ENST00000299840 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
VWA3A-201ENST00000299840 FLAD1Q8NFF5 587 aa13.72□□□□□ -0.21
VWA3A-201ENST00000299840 BTBD11A6QL63 1104 aa13.71□□□□□ -0.21
VWA3A-201ENST00000299840 TTC5Q8N0Z6 440 aa13.71□□□□□ -0.21
VWA3A-201ENST00000299840 DDRGK1Q96HY6 314 aa13.71□□□□□ -0.21
VWA3A-201ENST00000299840 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
VWA3A-201ENST00000299840 TICAM2Q86XR7 235 aa13.71□□□□□ -0.21
VWA3A-201ENST00000299840 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.21
VWA3A-201ENST00000299840 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
VWA3A-201ENST00000299840 TFCP2L1Q9NZI6 479 aa13.71□□□□□ -0.21
VWA3A-201ENST00000299840 ZHX1Q9UKY1 873 aaPredicted RBP13.71□□□□□ -0.21
VWA3A-201ENST00000299840 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.22
VWA3A-201ENST00000299840 LAMB4A4D0S4 1761 aa13.7□□□□□ -0.22
VWA3A-201ENST00000299840 IRX3P78415 501 aaPredicted RBP13.7□□□□□ -0.22
VWA3A-201ENST00000299840 AK7Q96M32 723 aa13.7□□□□□ -0.22
VWA3A-201ENST00000299840 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
VWA3A-201ENST00000299840 CCER2I3L3R5 266 aa13.69□□□□□ -0.22
VWA3A-201ENST00000299840 FMNL2Q96PY5 1086 aa13.69□□□□□ -0.22
VWA3A-201ENST00000299840 TEX13AQ9BXU3 409 aaPredicted RBP13.69□□□□□ -0.22
VWA3A-201ENST00000299840 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.69□□□□□ -0.22
VWA3A-201ENST00000299840 SSFA2P28290 1259 aa13.69□□□□□ -0.22
VWA3A-201ENST00000299840 ZNF496Q96IT1 587 aaPredicted RBP13.69□□□□□ -0.22
VWA3A-201ENST00000299840 KCNA4P22459 653 aa13.68□□□□□ -0.22
VWA3A-201ENST00000299840 CLCN1P35523 988 aa13.68□□□□□ -0.22
VWA3A-201ENST00000299840 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
VWA3A-201ENST00000299840 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
VWA3A-201ENST00000299840 APAF1O14727 1248 aa13.68□□□□□ -0.22
VWA3A-201ENST00000299840 KCNQ3O43525 872 aa13.68□□□□□ -0.22
VWA3A-201ENST00000299840 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
VWA3A-201ENST00000299840 CYP19A1P11511 503 aaPredicted RBP13.68□□□□□ -0.22
VWA3A-201ENST00000299840 COL23A1Q86Y22 540 aaPredicted RBP13.68□□□□□ -0.22
VWA3A-201ENST00000299840 DNAJC10Q8IXB1 793 aa13.68□□□□□ -0.22
VWA3A-201ENST00000299840 PPP4R2Q9NY27 417 aa13.68□□□□□ -0.22
VWA3A-201ENST00000299840 RRP7AQ9Y3A4 280 aaKnown RBP13.68□□□□□ -0.22
VWA3A-201ENST00000299840 MTFR1LQ9H019 292 aa13.67□□□□□ -0.22
VWA3A-201ENST00000299840 ADRA2BP18089 450 aa13.67□□□□□ -0.22
VWA3A-201ENST00000299840 INTS5Q6P9B9 1019 aaKnown RBP13.67□□□□□ -0.22
VWA3A-201ENST00000299840 THUMPD2Q9BTF0 503 aaKnown RBP13.67□□□□□ -0.22
VWA3A-201ENST00000299840 SPON1Q9HCB6 807 aa13.67□□□□□ -0.22
VWA3A-201ENST00000299840 TPM2P07951 284 aa13.66□□□□□ -0.22
VWA3A-201ENST00000299840 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
VWA3A-201ENST00000299840 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
VWA3A-201ENST00000299840 GNPATO15228 680 aa13.66□□□□□ -0.22
VWA3A-201ENST00000299840 FAM193AP78312 1265 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms