RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 PROSER3Q2NL68 480 aa13.18□□□□□ -0.3
COPS2-201ENST00000299259 SIRT2Q8IXJ6 389 aa13.18□□□□□ -0.3
COPS2-201ENST00000299259 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
COPS2-201ENST00000299259 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
COPS2-201ENST00000299259 BACH2Q9BYV9 841 aa13.18□□□□□ -0.3
COPS2-201ENST00000299259 SPATA31A1Q5TZJ5 1347 aa13.18□□□□□ -0.3
COPS2-201ENST00000299259 GNAI3P08754 354 aa13.17□□□□□ -0.3
COPS2-201ENST00000299259 CEP85Q6P2H3 762 aa13.17□□□□□ -0.3
COPS2-201ENST00000299259 RPAP2Q8IXW5 612 aaPredicted RBP13.17□□□□□ -0.3
COPS2-201ENST00000299259 ANKRD44Q8N8A2 993 aa13.17□□□□□ -0.3
COPS2-201ENST00000299259 DNAAF4Q8WXU2 420 aa13.17□□□□□ -0.3
COPS2-201ENST00000299259 CDCA7Q9BWT1 371 aaPredicted RBP13.17□□□□□ -0.3
COPS2-201ENST00000299259 PI4KAP2A4QPH2 592 aa13.17□□□□□ -0.3
COPS2-201ENST00000299259 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
COPS2-201ENST00000299259 PI4KAP1Q8N8J0 262 aa13.17□□□□□ -0.3
COPS2-201ENST00000299259 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
COPS2-201ENST00000299259 NUCB1Q02818 461 aa13.16□□□□□ -0.3
COPS2-201ENST00000299259 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
COPS2-201ENST00000299259 CERKQ8TCT0 537 aa13.16□□□□□ -0.3
COPS2-201ENST00000299259 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
COPS2-201ENST00000299259 TMOD3Q9NYL9 352 aa13.16□□□□□ -0.3
COPS2-201ENST00000299259 SPATA31A5Q5VU36 1347 aa13.15□□□□□ -0.3
COPS2-201ENST00000299259 SPATA31A7Q8IWB4 1347 aa13.15□□□□□ -0.3
COPS2-201ENST00000299259 GNAI2P04899 355 aa13.15□□□□□ -0.3
COPS2-201ENST00000299259 PDIA6Q15084 440 aa13.15□□□□□ -0.3
COPS2-201ENST00000299259 DDX58O95786 925 aaKnown RBP13.15□□□□□ -0.3
COPS2-201ENST00000299259 KSR2Q6VAB6 950 aa13.15□□□□□ -0.3
COPS2-201ENST00000299259 MAP3K2Q9Y2U5 619 aa13.15□□□□□ -0.3
COPS2-201ENST00000299259 EXOC5O00471 708 aa13.14□□□□□ -0.31
COPS2-201ENST00000299259 HMMRO75330 724 aa13.14□□□□□ -0.31
COPS2-201ENST00000299259 BEND3Q5T5X7 828 aa13.14□□□□□ -0.31
COPS2-201ENST00000299259 CHD1LQ86WJ1 897 aa13.14□□□□□ -0.31
COPS2-201ENST00000299259 ERBB4Q15303 1308 aa13.14□□□□□ -0.31
COPS2-201ENST00000299259 SPATA31A6Q5VVP1 1343 aa13.14□□□□□ -0.31
COPS2-201ENST00000299259 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
COPS2-201ENST00000299259 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
COPS2-201ENST00000299259 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
COPS2-201ENST00000299259 BCL9O00512 1426 aa13.13□□□□□ -0.31
COPS2-201ENST00000299259 TJP1Q07157 1748 aa13.13□□□□□ -0.31
COPS2-201ENST00000299259 MYL6BP14649 208 aa13.13□□□□□ -0.31
COPS2-201ENST00000299259 LNPKQ9C0E8 428 aa13.13□□□□□ -0.31
COPS2-201ENST00000299259 USP44Q9H0E7 712 aa13.13□□□□□ -0.31
COPS2-201ENST00000299259 DCTPP1Q9H773 170 aa13.13□□□□□ -0.31
COPS2-201ENST00000299259 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
COPS2-201ENST00000299259 LRRFIP2Q9Y608 721 aaKnown RBP13.12□□□□□ -0.31
COPS2-201ENST00000299259 BCL9LQ86UU0 1499 aa13.12□□□□□ -0.31
COPS2-201ENST00000299259 ALDH1L1O75891 902 aa13.12□□□□□ -0.31
COPS2-201ENST00000299259 AIMP1Q12904 312 aaKnown RBP13.12□□□□□ -0.31
COPS2-201ENST00000299259 DDB1Q16531 1140 aa13.12□□□□□ -0.31
COPS2-201ENST00000299259 ANKRD45Q5TZF3 282 aa13.12□□□□□ -0.31
COPS2-201ENST00000299259 BARGINQ6ZT62 677 aa13.12□□□□□ -0.31
COPS2-201ENST00000299259 LRP10Q7Z4F1 713 aa13.12□□□□□ -0.31
COPS2-201ENST00000299259 XAGE3Q8WTP9 111 aa13.12□□□□□ -0.31
COPS2-201ENST00000299259 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
COPS2-201ENST00000299259 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
COPS2-201ENST00000299259 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
COPS2-201ENST00000299259 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
COPS2-201ENST00000299259 PIGBQ92521 554 aa13.1□□□□□ -0.31
COPS2-201ENST00000299259 IBTKQ9P2D0 1353 aaPredicted RBP13.1□□□□□ -0.31
COPS2-201ENST00000299259 THSD7AQ9UPZ6 1657 aa13.1□□□□□ -0.31
COPS2-201ENST00000299259 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
COPS2-201ENST00000299259 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
COPS2-201ENST00000299259 COPS6Q7L5N1 327 aa13.1□□□□□ -0.31
COPS2-201ENST00000299259 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
COPS2-201ENST00000299259 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
COPS2-201ENST00000299259 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
COPS2-201ENST00000299259 NBPF7P0C2Y1 421 aaPredicted RBP13.08□□□□□ -0.31
COPS2-201ENST00000299259 NEXNQ0ZGT2 675 aa13.08□□□□□ -0.31
COPS2-201ENST00000299259 ATG3Q9NT62 314 aa13.08□□□□□ -0.31
COPS2-201ENST00000299259 ASAP1Q9ULH1 1129 aa13.08□□□□□ -0.31
COPS2-201ENST00000299259 ANP32AP39687 249 aaKnown RBP13.08□□□□□ -0.32
COPS2-201ENST00000299259 VPS72Q15906 364 aa13.08□□□□□ -0.32
COPS2-201ENST00000299259 CWF19L2Q2TBE0 894 aaKnown RBP13.08□□□□□ -0.32
COPS2-201ENST00000299259 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
COPS2-201ENST00000299259 SYTL4Q96C24 671 aaPredicted RBP13.08□□□□□ -0.32
COPS2-201ENST00000299259 ANKRD36CQ5JPF3 1778 aa13.08□□□□□ -0.32
COPS2-201ENST00000299259 PNMA6EA0A0J9YXQ4 647 aa13.07□□□□□ -0.32
COPS2-201ENST00000299259 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
COPS2-201ENST00000299259 ATP8B2P98198 1209 aa13.07□□□□□ -0.32
COPS2-201ENST00000299259 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
COPS2-201ENST00000299259 NBPF10Q6P3W6 841 aaKnown RBP13.07□□□□□ -0.32
COPS2-201ENST00000299259 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
COPS2-201ENST00000299259 FNBP4Q8N3X1 1017 aaPredicted RBP13.07□□□□□ -0.32
COPS2-201ENST00000299259 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
COPS2-201ENST00000299259 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
COPS2-201ENST00000299259 TUBGCP6Q96RT7 1819 aa13.07□□□□□ -0.32
COPS2-201ENST00000299259 GRM8O00222 908 aa13.06□□□□□ -0.32
COPS2-201ENST00000299259 METTL22Q9BUU2 404 aaPredicted RBP13.06□□□□□ -0.32
COPS2-201ENST00000299259 HDAC5Q9UQL6 1122 aa13.06□□□□□ -0.32
COPS2-201ENST00000299259 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
COPS2-201ENST00000299259 MYD88Q99836 296 aa13.06□□□□□ -0.32
COPS2-201ENST00000299259 TEX13AQ9BXU3 409 aaPredicted RBP13.06□□□□□ -0.32
COPS2-201ENST00000299259 UTYO14607 1347 aa13.06□□□□□ -0.32
COPS2-201ENST00000299259 NEURL1BA8MQ27 555 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 A1BGP04217 495 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 HSPA1LP34931 641 aa13.05□□□□□ -0.32
COPS2-201ENST00000299259 MARCH10Q8NA82 808 aaPredicted RBP13.05□□□□□ -0.32
COPS2-201ENST00000299259 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
COPS2-201ENST00000299259 RREB1Q92766 1687 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms