RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 TRPM3Q9HCF6 1732 aaPredicted RBP24.55■■□□□ 1.52
HPS6-201ENST00000299238 TSC1Q92574 1164 aa24.55■■□□□ 1.52
HPS6-201ENST00000299238 TMEM51Q9NW97 253 aa24.54■■□□□ 1.52
HPS6-201ENST00000299238 VGLL3A8MV65 326 aa24.54■■□□□ 1.52
HPS6-201ENST00000299238 SKOR2Q2VWA4 1001 aaPredicted RBP24.54■■□□□ 1.52
HPS6-201ENST00000299238 AK9Q5TCS8 1911 aa24.54■■□□□ 1.52
HPS6-201ENST00000299238 LRRC59Q96AG4 307 aaKnown RBP24.53■■□□□ 1.52
HPS6-201ENST00000299238 EXOC6BQ9Y2D4 811 aa24.53■■□□□ 1.52
HPS6-201ENST00000299238 PDE1AP54750 535 aa24.53■■□□□ 1.52
HPS6-201ENST00000299238 HDGFL1Q5TGJ6 251 aa24.53■■□□□ 1.52
HPS6-201ENST00000299238 CASC1Q6TDU7 716 aa24.52■■□□□ 1.52
HPS6-201ENST00000299238 TUBGCP6Q96RT7 1819 aa24.52■■□□□ 1.52
HPS6-201ENST00000299238 SALL3Q9BXA9 1300 aa24.52■■□□□ 1.52
HPS6-201ENST00000299238 GNAI3P08754 354 aa24.51■■□□□ 1.51
HPS6-201ENST00000299238 GCP02774 474 aa24.51■■□□□ 1.51
HPS6-201ENST00000299238 LGR6Q9HBX8 967 aa24.51■■□□□ 1.51
HPS6-201ENST00000299238 KIF1AQ12756 1690 aa24.51■■□□□ 1.51
HPS6-201ENST00000299238 ARHGEF25Q86VW2 580 aa24.5■■□□□ 1.51
HPS6-201ENST00000299238 NCAPD2Q15021 1401 aa24.5■■□□□ 1.51
HPS6-201ENST00000299238 CLEC17AQ6ZS10 378 aa24.49■■□□□ 1.51
HPS6-201ENST00000299238 CAMTA1Q9Y6Y1 1673 aa24.49■■□□□ 1.51
HPS6-201ENST00000299238 SASS6Q6UVJ0 657 aa24.49■■□□□ 1.51
HPS6-201ENST00000299238 PXDNQ92626 1479 aa24.49■■□□□ 1.51
HPS6-201ENST00000299238 PNMA6EA0A0J9YXQ4 647 aa24.48■■□□□ 1.51
HPS6-201ENST00000299238 ZNF530Q6P9A1 599 aaPredicted RBP24.48■■□□□ 1.51
HPS6-201ENST00000299238 REC8O95072 547 aa24.48■■□□□ 1.51
HPS6-201ENST00000299238 PKP1Q13835 747 aa24.48■■□□□ 1.51
HPS6-201ENST00000299238 EIF4A1P60842 406 aaKnown RBP24.48■■□□□ 1.51
HPS6-201ENST00000299238 LMOD2Q6P5Q4 547 aa24.48■■□□□ 1.51
HPS6-201ENST00000299238 DDX49Q9Y6V7 483 aaKnown RBP24.48■■□□□ 1.51
HPS6-201ENST00000299238 ERC2O15083 957 aa24.47■■□□□ 1.51
HPS6-201ENST00000299238 ATP8B2P98198 1209 aa24.47■■□□□ 1.51
HPS6-201ENST00000299238 AKAP4Q5JQC9 854 aa24.47■■□□□ 1.51
HPS6-201ENST00000299238 PHAXQ9H814 394 aaKnown RBP24.47■■□□□ 1.51
HPS6-201ENST00000299238 NCLP19338 710 aaKnown RBP24.47■■□□□ 1.51
HPS6-201ENST00000299238 ZKSCAN5Q9Y2L8 839 aa24.47■■□□□ 1.51
HPS6-201ENST00000299238 IBTKQ9P2D0 1353 aaPredicted RBP24.46■■□□□ 1.51
HPS6-201ENST00000299238 PLEKHO1Q53GL0 409 aaPredicted RBP24.46■■□□□ 1.51
HPS6-201ENST00000299238 ZBTB22O15209 634 aa24.46■■□□□ 1.51
HPS6-201ENST00000299238 HS1BP3Q53T59 392 aa24.46■■□□□ 1.51
HPS6-201ENST00000299238 LRRCC1Q9C099 1032 aa24.46■■□□□ 1.51
HPS6-201ENST00000299238 RBSNQ9H1K0 784 aa24.46■■□□□ 1.51
HPS6-201ENST00000299238 C1orf167Q5SNV9 1468 aa24.45■■□□□ 1.5
HPS6-201ENST00000299238 PTMSP20962 102 aa24.45■■□□□ 1.5
HPS6-201ENST00000299238 PROSER2Q86WR7 435 aaPredicted RBP24.45■■□□□ 1.5
HPS6-201ENST00000299238 LRRFIP2Q9Y608 721 aaKnown RBP24.45■■□□□ 1.5
HPS6-201ENST00000299238 RGPD5Q99666 1765 aa24.45■■□□□ 1.5
HPS6-201ENST00000299238 TEFQ10587 303 aa24.45■■□□□ 1.5
HPS6-201ENST00000299238 ANKRD24Q8TF21 1146 aa24.45■■□□□ 1.5
HPS6-201ENST00000299238 HOXB7P09629 217 aa24.44■■□□□ 1.5
HPS6-201ENST00000299238 EIF2S2P20042 333 aaKnown RBP24.44■■□□□ 1.5
HPS6-201ENST00000299238 ATP2B3Q16720 1220 aa24.44■■□□□ 1.5
HPS6-201ENST00000299238 ZNF710Q8N1W2 664 aa24.44■■□□□ 1.5
HPS6-201ENST00000299238 PLCD3Q8N3E9 789 aa24.44■■□□□ 1.5
HPS6-201ENST00000299238 IGSF3O75054 1194 aa24.44■■□□□ 1.5
HPS6-201ENST00000299238 ZGPATQ8N5A5 531 aaKnown RBP24.44■■□□□ 1.5
HPS6-201ENST00000299238 USP44Q9H0E7 712 aa24.44■■□□□ 1.5
HPS6-201ENST00000299238 KCNQ3O43525 872 aa24.43■■□□□ 1.5
HPS6-201ENST00000299238 KIF20AO95235 890 aa24.43■■□□□ 1.5
HPS6-201ENST00000299238 MPRIPQ6WCQ1 1025 aa24.43■■□□□ 1.5
HPS6-201ENST00000299238 PDLIM2Q96JY6 352 aa24.43■■□□□ 1.5
HPS6-201ENST00000299238 ZNF830Q96NB3 372 aaPredicted RBP24.43■■□□□ 1.5
HPS6-201ENST00000299238 BAG4O95429 457 aaKnown RBP24.43■■□□□ 1.5
HPS6-201ENST00000299238 AMOTQ4VCS5 1084 aa24.43■■□□□ 1.5
HPS6-201ENST00000299238 KRT28Q7Z3Y7 464 aa24.43■■□□□ 1.5
HPS6-201ENST00000299238 ALS2Q96Q42 1657 aa24.42■■□□□ 1.5
HPS6-201ENST00000299238 FAM177BA6PVY3 158 aa24.42■■□□□ 1.5
HPS6-201ENST00000299238 GTPBP4Q9BZE4 634 aaKnown RBP24.42■■□□□ 1.5
HPS6-201ENST00000299238 CYP2E1P05181 493 aaPredicted RBP24.42■■□□□ 1.5
HPS6-201ENST00000299238 UBTFL1P0CB47 393 aaPredicted RBP24.42■■□□□ 1.5
HPS6-201ENST00000299238 MX1P20591 662 aa24.42■■□□□ 1.5
HPS6-201ENST00000299238 CSPP1Q1MSJ5 1256 aa24.42■■□□□ 1.5
HPS6-201ENST00000299238 IPO4Q8TEX9 1081 aaKnown RBP24.42■■□□□ 1.5
HPS6-201ENST00000299238 CHPF2Q9P2E5 772 aa24.42■■□□□ 1.5
HPS6-201ENST00000299238 BTBD11A6QL63 1104 aa24.41■■□□□ 1.5
HPS6-201ENST00000299238 OVOS2A0A0G2JMS6 1433 aa24.41■■□□□ 1.5
HPS6-201ENST00000299238 ST18O60284 1047 aa24.41■■□□□ 1.5
HPS6-201ENST00000299238 KLHL40Q2TBA0 621 aa24.4■■□□□ 1.5
HPS6-201ENST00000299238 C1orf141Q5JVX7 400 aa24.4■■□□□ 1.5
HPS6-201ENST00000299238 SIPA1L3O60292 1781 aaPredicted RBP24.39■■□□□ 1.5
HPS6-201ENST00000299238 RNMTO43148 476 aaKnown RBP24.39■■□□□ 1.5
HPS6-201ENST00000299238 MCTP1Q6DN14 999 aa24.39■■□□□ 1.5
HPS6-201ENST00000299238 CAVIN1Q6NZI2 390 aaKnown RBP24.39■■□□□ 1.5
HPS6-201ENST00000299238 CHAMP1Q96JM3 812 aa24.39■■□□□ 1.5
HPS6-201ENST00000299238 STAP2Q9UGK3 403 aa24.39■■□□□ 1.5
HPS6-201ENST00000299238 AXIN2Q9Y2T1 843 aa24.39■■□□□ 1.5
HPS6-201ENST00000299238 ESYT1Q9BSJ8 1104 aa24.39■■□□□ 1.49
HPS6-201ENST00000299238 SRCIN1Q9C0H9 1055 aa24.39■■□□□ 1.49
HPS6-201ENST00000299238 MST1RQ04912 1400 aa24.38■■□□□ 1.49
HPS6-201ENST00000299238 NUCB2P80303 420 aa24.38■■□□□ 1.49
HPS6-201ENST00000299238 LETM1O95202 739 aaPredicted RBP24.37■■□□□ 1.49
HPS6-201ENST00000299238 CHMP4AQ9BY43 222 aa24.37■■□□□ 1.49
HPS6-201ENST00000299238 C19orf44Q9H6X5 657 aa24.37■■□□□ 1.49
HPS6-201ENST00000299238 GOLGA6L22H0YM25 854 aa24.37■■□□□ 1.49
HPS6-201ENST00000299238 PRIM1P49642 420 aaKnown RBP24.37■■□□□ 1.49
HPS6-201ENST00000299238 SSH3Q8TE77 659 aa24.37■■□□□ 1.49
HPS6-201ENST00000299238 RILPL2Q969X0 211 aa24.37■■□□□ 1.49
HPS6-201ENST00000299238 SPDYE4A6NLX3 237 aa24.36■■□□□ 1.49
HPS6-201ENST00000299238 CWC22Q9HCG8 908 aaKnown RBP24.36■■□□□ 1.49
HPS6-201ENST00000299238 TRIM6-TRIM34B2RNG4 842 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms