RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
FOXN4-201ENST00000299162 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
FOXN4-201ENST00000299162 A0A0G2JS52 829 aa12.35□□□□□ -0.43
FOXN4-201ENST00000299162 SSFA2P28290 1259 aa12.35□□□□□ -0.43
FOXN4-201ENST00000299162 TNPO1Q92973 898 aaKnown RBP12.35□□□□□ -0.43
FOXN4-201ENST00000299162 UPF3BQ9BZI7 483 aaKnown RBP12.35□□□□□ -0.43
FOXN4-201ENST00000299162 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
FOXN4-201ENST00000299162 DDX54Q8TDD1 881 aaKnown RBP12.34□□□□□ -0.43
FOXN4-201ENST00000299162 HTATSF1O43719 755 aaKnown RBP12.33□□□□□ -0.43
FOXN4-201ENST00000299162 CLCN1P35523 988 aa12.33□□□□□ -0.43
FOXN4-201ENST00000299162 ATP8B2P98198 1209 aa12.33□□□□□ -0.43
FOXN4-201ENST00000299162 AKAP4Q5JQC9 854 aa12.33□□□□□ -0.43
FOXN4-201ENST00000299162 USP26Q9BXU7 913 aa12.33□□□□□ -0.43
FOXN4-201ENST00000299162 GRPEL1Q9HAV7 217 aa12.33□□□□□ -0.43
FOXN4-201ENST00000299162 ERBB4Q15303 1308 aa12.33□□□□□ -0.43
FOXN4-201ENST00000299162 NPHP4O75161 1426 aaPredicted RBP12.33□□□□□ -0.43
FOXN4-201ENST00000299162 NEK4P51957 841 aa12.33□□□□□ -0.44
FOXN4-201ENST00000299162 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.44
FOXN4-201ENST00000299162 KLHDC4Q8TBB5 520 aa12.33□□□□□ -0.44
FOXN4-201ENST00000299162 TOPAZ1Q8N9V7 1692 aa12.33□□□□□ -0.44
FOXN4-201ENST00000299162 PKP1Q13835 747 aa12.33□□□□□ -0.44
FOXN4-201ENST00000299162 ZGPATQ8N5A5 531 aaKnown RBP12.33□□□□□ -0.44
FOXN4-201ENST00000299162 C19orf44Q9H6X5 657 aa12.33□□□□□ -0.44
FOXN4-201ENST00000299162 SOS1Q07889 1333 aaPredicted RBP12.32□□□□□ -0.44
FOXN4-201ENST00000299162 ERC2O15083 957 aa12.32□□□□□ -0.44
FOXN4-201ENST00000299162 KIAA1211Q6ZU35 1233 aa12.32□□□□□ -0.44
FOXN4-201ENST00000299162 RIC3Q7Z5B4 369 aa12.32□□□□□ -0.44
FOXN4-201ENST00000299162 STRN4Q9NRL3 753 aa12.32□□□□□ -0.44
FOXN4-201ENST00000299162 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
FOXN4-201ENST00000299162 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
FOXN4-201ENST00000299162 ADGRL3Q9HAR2 1447 aa12.31□□□□□ -0.44
FOXN4-201ENST00000299162 REC8O95072 547 aa12.3□□□□□ -0.44
FOXN4-201ENST00000299162 PALD1Q9ULE6 856 aa12.3□□□□□ -0.44
FOXN4-201ENST00000299162 MRE11P49959 708 aa12.3□□□□□ -0.44
FOXN4-201ENST00000299162 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
FOXN4-201ENST00000299162 IL25Q9H293 177 aa12.3□□□□□ -0.44
FOXN4-201ENST00000299162 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
FOXN4-201ENST00000299162 TMEM94Q12767 1356 aa12.3□□□□□ -0.44
FOXN4-201ENST00000299162 ATP5J2-PTCD1G3V325 749 aa12.3□□□□□ -0.44
FOXN4-201ENST00000299162 PTCD1O75127 700 aaKnown RBP12.3□□□□□ -0.44
FOXN4-201ENST00000299162 RHPN1Q8TCX5 695 aa12.3□□□□□ -0.44
FOXN4-201ENST00000299162 DBF4Q9UBU7 674 aaPredicted RBP12.3□□□□□ -0.44
FOXN4-201ENST00000299162 SPG7Q9UQ90 795 aa12.3□□□□□ -0.44
FOXN4-201ENST00000299162 PXDNQ92626 1479 aa12.29□□□□□ -0.44
FOXN4-201ENST00000299162 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
FOXN4-201ENST00000299162 TATP17735 454 aaPredicted RBP12.29□□□□□ -0.44
FOXN4-201ENST00000299162 AMOTQ4VCS5 1084 aa12.29□□□□□ -0.44
FOXN4-201ENST00000299162 ANP32BQ92688 251 aaKnown RBP12.29□□□□□ -0.44
FOXN4-201ENST00000299162 PRDM10Q9NQV6 1147 aa12.29□□□□□ -0.44
FOXN4-201ENST00000299162 BEND3Q5T5X7 828 aa12.29□□□□□ -0.44
FOXN4-201ENST00000299162 MCTP1Q6DN14 999 aa12.29□□□□□ -0.44
FOXN4-201ENST00000299162 CCDC8Q9H0W5 538 aaPredicted RBP12.29□□□□□ -0.44
FOXN4-201ENST00000299162 KAT6BQ8WYB5 2073 aa12.28□□□□□ -0.44
FOXN4-201ENST00000299162 ST18O60284 1047 aa12.28□□□□□ -0.44
FOXN4-201ENST00000299162 RABEP1Q15276 862 aa12.28□□□□□ -0.44
FOXN4-201ENST00000299162 TTC5Q8N0Z6 440 aa12.28□□□□□ -0.44
FOXN4-201ENST00000299162 KIF24Q5T7B8 1368 aa12.28□□□□□ -0.44
FOXN4-201ENST00000299162 SNX21Q969T3 373 aa12.28□□□□□ -0.44
FOXN4-201ENST00000299162 ZNF496Q96IT1 587 aaPredicted RBP12.28□□□□□ -0.44
FOXN4-201ENST00000299162 R3HCC1Q9Y3T6 440 aaKnown RBP12.28□□□□□ -0.44
FOXN4-201ENST00000299162 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
FOXN4-201ENST00000299162 ERBB3P21860 1342 aa12.28□□□□□ -0.44
FOXN4-201ENST00000299162 CPA1P15085 419 aa12.27□□□□□ -0.44
FOXN4-201ENST00000299162 COPS6Q7L5N1 327 aa12.27□□□□□ -0.44
FOXN4-201ENST00000299162 MYD88Q99836 296 aa12.27□□□□□ -0.44
FOXN4-201ENST00000299162 PDCL3Q9H2J4 239 aa12.27□□□□□ -0.44
FOXN4-201ENST00000299162 NALCNQ8IZF0 1738 aa12.27□□□□□ -0.44
FOXN4-201ENST00000299162 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.45
FOXN4-201ENST00000299162 MPNDQ8N594 471 aa12.27□□□□□ -0.45
FOXN4-201ENST00000299162 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
FOXN4-201ENST00000299162 PRDM11Q9NQV5 511 aa12.27□□□□□ -0.45
FOXN4-201ENST00000299162 NDUFB9Q9Y6M9 179 aa12.27□□□□□ -0.45
FOXN4-201ENST00000299162 MSNP26038 577 aaKnown RBP12.27□□□□□ -0.45
FOXN4-201ENST00000299162 XRN1Q8IZH2 1706 aaKnown RBP12.27□□□□□ -0.45
FOXN4-201ENST00000299162 GBP4Q96PP9 640 aa12.27□□□□□ -0.45
FOXN4-201ENST00000299162 ESYT1Q9BSJ8 1104 aa12.27□□□□□ -0.45
FOXN4-201ENST00000299162 FMN2Q9NZ56 1722 aa12.26□□□□□ -0.45
FOXN4-201ENST00000299162 CHMLP26374 656 aa12.26□□□□□ -0.45
FOXN4-201ENST00000299162 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
FOXN4-201ENST00000299162 RGPD1P0DJD0 1748 aa12.26□□□□□ -0.45
FOXN4-201ENST00000299162 NWD1Q149M9 1564 aa12.26□□□□□ -0.45
FOXN4-201ENST00000299162 ZNF790Q6PG37 636 aa12.26□□□□□ -0.45
FOXN4-201ENST00000299162 AACSQ86V21 672 aa12.26□□□□□ -0.45
FOXN4-201ENST00000299162 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
FOXN4-201ENST00000299162 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
FOXN4-201ENST00000299162 AK9Q5TCS8 1911 aa12.26□□□□□ -0.45
FOXN4-201ENST00000299162 IFIT2P09913 472 aaKnown RBP12.26□□□□□ -0.45
FOXN4-201ENST00000299162 CCDC85AQ96PX6 553 aaPredicted RBP12.25□□□□□ -0.45
FOXN4-201ENST00000299162 BICC1Q9H694 974 aaKnown RBP12.25□□□□□ -0.45
FOXN4-201ENST00000299162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.25□□□□□ -0.45
FOXN4-201ENST00000299162 DDX49Q9Y6V7 483 aaKnown RBP12.25□□□□□ -0.45
FOXN4-201ENST00000299162 ADCY9O60503 1353 aa12.25□□□□□ -0.45
FOXN4-201ENST00000299162 CABP4P57796 275 aa12.25□□□□□ -0.45
FOXN4-201ENST00000299162 CLASRPQ8N2M8 674 aaKnown RBP12.25□□□□□ -0.45
FOXN4-201ENST00000299162 SSH3Q8TE77 659 aa12.25□□□□□ -0.45
FOXN4-201ENST00000299162 SUCLG2Q96I99 432 aa12.25□□□□□ -0.45
FOXN4-201ENST00000299162 CEMIPQ8WUJ3 1361 aa12.25□□□□□ -0.45
FOXN4-201ENST00000299162 KCNJ4P48050 445 aa12.24□□□□□ -0.45
FOXN4-201ENST00000299162 KSR2Q6VAB6 950 aa12.24□□□□□ -0.45
FOXN4-201ENST00000299162 KIF1BPQ96EK5 621 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms