RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 HEG1Q9ULI3 1381 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 TTC41PQ6P2S7 1318 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 ZNF445P59923 1031 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 ESCO1Q5FWF5 840 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 C14orf37Q86TY3 774 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 LTV1Q96GA3 475 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 DBF4Q9UBU7 674 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 C1orf141Q5JVX7 400 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 NBPF6Q5VWK0 638 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 NUTM2GQ5VZR2 741 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 ZNF530Q6P9A1 599 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 ERC1Q8IUD2 1116 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 NBPF4Q96M43 638 aa12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 DDX49Q9Y6V7 483 aaKnown RBP12.18□□□□□ -0.46
TNFRSF11B-201ENST00000297350 ARHGEF25Q86VW2 580 aa12.17□□□□□ -0.46
TNFRSF11B-201ENST00000297350 PPP1R42Q7Z4L9 355 aa12.17□□□□□ -0.46
TNFRSF11B-201ENST00000297350 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
TNFRSF11B-201ENST00000297350 RHPN1Q8TCX5 695 aa12.17□□□□□ -0.46
TNFRSF11B-201ENST00000297350 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
TNFRSF11B-201ENST00000297350 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
TNFRSF11B-201ENST00000297350 BTBD11A6QL63 1104 aa12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 TRIM6-TRIM34B2RNG4 842 aa12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 MBD3O95983 291 aa12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 NEK4P51957 841 aa12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 KDM4FA0A1W2PPD8 638 aa12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 SURF6O75683 361 aaKnown RBP12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 GPATCH3Q96I76 525 aa12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 ANO2Q9NQ90 1003 aa12.16□□□□□ -0.46
TNFRSF11B-201ENST00000297350 PXDNQ92626 1479 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 SRGAP3O43295 1099 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 HSPA4P34932 840 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 CLCN1P35523 988 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 TMX3Q96JJ7 454 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 CHPF2Q9P2E5 772 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 ADCY9O60503 1353 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 RAD50Q92878 1312 aa12.15□□□□□ -0.46
TNFRSF11B-201ENST00000297350 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.47
TNFRSF11B-201ENST00000297350 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.47
TNFRSF11B-201ENST00000297350 RUFY2Q8WXA3 655 aa12.15□□□□□ -0.47
TNFRSF11B-201ENST00000297350 RILPL2Q969X0 211 aa12.15□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PHAXQ9H814 394 aaKnown RBP12.15□□□□□ -0.47
TNFRSF11B-201ENST00000297350 COL18A1P39060 1754 aa12.14□□□□□ -0.47
TNFRSF11B-201ENST00000297350 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
TNFRSF11B-201ENST00000297350 GCP02774 474 aa12.14□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PI4K2BQ8TCG2 481 aa12.14□□□□□ -0.47
TNFRSF11B-201ENST00000297350 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ORAI2Q96SN7 254 aa12.14□□□□□ -0.47
TNFRSF11B-201ENST00000297350 MCTP1Q6DN14 999 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PANK2Q9BZ23 570 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 UTYO14607 1347 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PI4KAP2A4QPH2 592 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 SGSM2O43147 1006 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 BRD1O95696 1058 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 CADPS2Q86UW7 1296 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PI4KAP1Q8N8J0 262 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 TRIM44Q96DX7 344 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PPP1R9BQ96SB3 815 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 LGR6Q9HBX8 967 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 TNS3Q68CZ2 1445 aa12.13□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ATF3P18847 181 aa12.12□□□□□ -0.47
TNFRSF11B-201ENST00000297350 HIP1O00291 1037 aa12.12□□□□□ -0.47
TNFRSF11B-201ENST00000297350 GIGYF1O75420 1035 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF11B-201ENST00000297350 PDIA4P13667 645 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11B-201ENST00000297350 EIF2S2P20042 333 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11B-201ENST00000297350 HS1BP3Q53T59 392 aa12.12□□□□□ -0.47
TNFRSF11B-201ENST00000297350 CLASRPQ8N2M8 674 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
TNFRSF11B-201ENST00000297350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNFRSF11B-201ENST00000297350 NASPP49321 788 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 KIAA1211Q6ZU35 1233 aa12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 GAS2L3Q86XJ1 694 aa12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 SYAP1Q96A49 352 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ABCA3Q99758 1704 aa12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 KRT28Q7Z3Y7 464 aa12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ZDHHC9Q9Y397 364 aa12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 RGPD5Q99666 1765 aa12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 NHSL1Q5SYE7 1610 aa12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 MRC1P22897 1456 aa12.11□□□□□ -0.47
TNFRSF11B-201ENST00000297350 NBPF7P0C2Y1 421 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ZSCAN23Q3MJ62 389 aa12.1□□□□□ -0.47
TNFRSF11B-201ENST00000297350 DDX21Q9NR30 783 aaKnown RBP eCLIP12.1□□□□□ -0.47
TNFRSF11B-201ENST00000297350 TSHZ3Q63HK5 1081 aa12.1□□□□□ -0.47
TNFRSF11B-201ENST00000297350 IL1RAPL2Q9NP60 686 aa12.1□□□□□ -0.47
TNFRSF11B-201ENST00000297350 RRAGDQ9NQL2 400 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF11B-201ENST00000297350 ECHDC1Q9NTX5 307 aa12.1□□□□□ -0.47
TNFRSF11B-201ENST00000297350 C9orf78Q9NZ63 289 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms