RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 ANKRD45Q5TZF3 282 aa26.72■■□□□ 1.87
SOX17-201ENST00000297316 ADCY9O60503 1353 aa26.72■■□□□ 1.87
SOX17-201ENST00000297316 ANKRD44Q8N8A2 993 aa26.71■■□□□ 1.87
SOX17-201ENST00000297316 CHMP4AQ9BY43 222 aa26.71■■□□□ 1.87
SOX17-201ENST00000297316 GLI3P10071 1580 aa26.71■■□□□ 1.87
SOX17-201ENST00000297316 NRAPQ86VF7 1730 aa26.71■■□□□ 1.87
SOX17-201ENST00000297316 ERVV-2B6SEH9 535 aa26.71■■□□□ 1.87
SOX17-201ENST00000297316 FMNL2Q96PY5 1086 aa26.7■■□□□ 1.86
SOX17-201ENST00000297316 PXDNLA1KZ92 1463 aa26.7■■□□□ 1.86
SOX17-201ENST00000297316 MYL6BP14649 208 aa26.69■■□□□ 1.86
SOX17-201ENST00000297316 DNAAF4Q8WXU2 420 aa26.69■■□□□ 1.86
SOX17-201ENST00000297316 SNRPA1P09661 255 aaKnown RBP26.68■■□□□ 1.86
SOX17-201ENST00000297316 AIMP1Q12904 312 aaKnown RBP26.68■■□□□ 1.86
SOX17-201ENST00000297316 DDX21Q9NR30 783 aaKnown RBP eCLIP26.68■■□□□ 1.86
SOX17-201ENST00000297316 USP44Q9H0E7 712 aa26.68■■□□□ 1.86
SOX17-201ENST00000297316 WNK3Q9BYP7 1800 aa26.67■■□□□ 1.86
SOX17-201ENST00000297316 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
SOX17-201ENST00000297316 BEND3Q5T5X7 828 aa26.66■■□□□ 1.86
SOX17-201ENST00000297316 RPAP2Q8IXW5 612 aaPredicted RBP26.66■■□□□ 1.86
SOX17-201ENST00000297316 BCL11AQ9H165 835 aa26.66■■□□□ 1.86
SOX17-201ENST00000297316 HYPKQ9NX55 129 aa26.66■■□□□ 1.86
SOX17-201ENST00000297316 MAP3K2Q9Y2U5 619 aa26.66■■□□□ 1.86
SOX17-201ENST00000297316 UBR2Q8IWV8 1755 aa26.66■■□□□ 1.86
SOX17-201ENST00000297316 SRCIN1Q9C0H9 1055 aa26.66■■□□□ 1.86
SOX17-201ENST00000297316 GNAI2P04899 355 aa26.65■■□□□ 1.86
SOX17-201ENST00000297316 DCTPP1Q9H773 170 aa26.65■■□□□ 1.86
SOX17-201ENST00000297316 PAPPAQ13219 1627 aa26.65■■□□□ 1.86
SOX17-201ENST00000297316 PTCD1O75127 700 aaKnown RBP26.65■■□□□ 1.86
SOX17-201ENST00000297316 ITGB4P16144 1822 aa26.64■■□□□ 1.85
SOX17-201ENST00000297316 DDRGK1Q96HY6 314 aa26.64■■□□□ 1.85
SOX17-201ENST00000297316 KCPQ6ZWJ8 1503 aa26.63■■□□□ 1.85
SOX17-201ENST00000297316 SPATA31A1Q5TZJ5 1347 aa26.63■■□□□ 1.85
SOX17-201ENST00000297316 GNAI3P08754 354 aa26.63■■□□□ 1.85
SOX17-201ENST00000297316 LRRFIP2Q9Y608 721 aaKnown RBP26.63■■□□□ 1.85
SOX17-201ENST00000297316 KSR2Q6VAB6 950 aa26.62■■□□□ 1.85
SOX17-201ENST00000297316 LAMB4A4D0S4 1761 aa26.62■■□□□ 1.85
SOX17-201ENST00000297316 TMOD3Q9NYL9 352 aa26.61■■□□□ 1.85
SOX17-201ENST00000297316 EXOC5O00471 708 aa26.61■■□□□ 1.85
SOX17-201ENST00000297316 NBPF7P0C2Y1 421 aaPredicted RBP26.61■■□□□ 1.85
SOX17-201ENST00000297316 SLC4A3P48751 1232 aa26.61■■□□□ 1.85
SOX17-201ENST00000297316 LRP10Q7Z4F1 713 aa26.61■■□□□ 1.85
SOX17-201ENST00000297316 XAGE3Q8WTP9 111 aa26.61■■□□□ 1.85
SOX17-201ENST00000297316 APBB1O00213 710 aa26.6■■□□□ 1.85
SOX17-201ENST00000297316 PIGBQ92521 554 aa26.6■■□□□ 1.85
SOX17-201ENST00000297316 SLIT2O94813 1529 aa26.6■■□□□ 1.85
SOX17-201ENST00000297316 PNMA6EA0A0J9YXQ4 647 aa26.6■■□□□ 1.85
SOX17-201ENST00000297316 UBTFL1P0CB47 393 aaPredicted RBP26.6■■□□□ 1.85
SOX17-201ENST00000297316 CWF19L2Q2TBE0 894 aaKnown RBP26.6■■□□□ 1.85
SOX17-201ENST00000297316 COPS6Q7L5N1 327 aa26.6■■□□□ 1.85
SOX17-201ENST00000297316 CCDC9Q9Y3X0 531 aaKnown RBP26.6■■□□□ 1.85
SOX17-201ENST00000297316 ASAP1Q9ULH1 1129 aa26.59■■□□□ 1.85
SOX17-201ENST00000297316 NWD2Q9ULI1 1742 aa26.59■■□□□ 1.85
SOX17-201ENST00000297316 CERKQ8TCT0 537 aa26.57■■□□□ 1.84
SOX17-201ENST00000297316 C8orf37Q96NL8 207 aa26.57■■□□□ 1.84
SOX17-201ENST00000297316 TNS2Q63HR2 1409 aa26.57■■□□□ 1.84
SOX17-201ENST00000297316 SPATA31A5Q5VU36 1347 aa26.56■■□□□ 1.84
SOX17-201ENST00000297316 SPATA31A7Q8IWB4 1347 aa26.56■■□□□ 1.84
SOX17-201ENST00000297316 NBPF26B4DH59 902 aa26.56■■□□□ 1.84
SOX17-201ENST00000297316 NBPF14Q5TI25 921 aa26.56■■□□□ 1.84
SOX17-201ENST00000297316 NBPF10Q6P3W6 841 aaKnown RBP26.56■■□□□ 1.84
SOX17-201ENST00000297316 NBPF15Q8N660 670 aa26.56■■□□□ 1.84
SOX17-201ENST00000297316 JCADQ9P266 1359 aa26.55■■□□□ 1.84
SOX17-201ENST00000297316 SMARCA5O60264 1052 aaPredicted RBP26.55■■□□□ 1.84
SOX17-201ENST00000297316 RIC3Q7Z5B4 369 aa26.55■■□□□ 1.84
SOX17-201ENST00000297316 C16orf71Q8IYS4 520 aaPredicted RBP26.55■■□□□ 1.84
SOX17-201ENST00000297316 DDX58O95786 925 aaKnown RBP26.55■■□□□ 1.84
SOX17-201ENST00000297316 A1BGP04217 495 aa26.54■■□□□ 1.84
SOX17-201ENST00000297316 ATP8B2P98198 1209 aa26.54■■□□□ 1.84
SOX17-201ENST00000297316 TBC1D32Q96NH3 1257 aa26.54■■□□□ 1.84
SOX17-201ENST00000297316 HMMRO75330 724 aa26.54■■□□□ 1.84
SOX17-201ENST00000297316 BMP2KLQ5H9B9 411 aa26.54■■□□□ 1.84
SOX17-201ENST00000297316 SYTL4Q96C24 671 aaPredicted RBP26.54■■□□□ 1.84
SOX17-201ENST00000297316 NBR1Q14596 966 aa26.53■■□□□ 1.84
SOX17-201ENST00000297316 ATG3Q9NT62 314 aa26.53■■□□□ 1.84
SOX17-201ENST00000297316 EXOC6BQ9Y2D4 811 aa26.53■■□□□ 1.84
SOX17-201ENST00000297316 DDB1Q16531 1140 aa26.53■■□□□ 1.84
SOX17-201ENST00000297316 OTUD7AQ8TE49 926 aaPredicted RBP26.53■■□□□ 1.84
SOX17-201ENST00000297316 NGLY1Q96IV0 654 aa26.53■■□□□ 1.84
SOX17-201ENST00000297316 IGKV5-2P06315 115 aa26.52■■□□□ 1.84
SOX17-201ENST00000297316 PLEKHM2Q8IWE5 1019 aa26.52■■□□□ 1.84
SOX17-201ENST00000297316 THRAP3Q9Y2W1 955 aaKnown RBP26.52■■□□□ 1.84
SOX17-201ENST00000297316 DOT1LQ8TEK3 1739 aa26.52■■□□□ 1.84
SOX17-201ENST00000297316 MFAP1P55081 439 aaKnown RBP26.51■■□□□ 1.84
SOX17-201ENST00000297316 ALDH1L1O75891 902 aa26.5■■□□□ 1.83
SOX17-201ENST00000297316 ANKRD13DQ6ZTN6 518 aa26.5■■□□□ 1.83
SOX17-201ENST00000297316 LINS1Q8NG48 757 aa26.5■■□□□ 1.83
SOX17-201ENST00000297316 UNC5CLQ8IV45 518 aa26.5■■□□□ 1.83
SOX17-201ENST00000297316 UPF2Q9HAU5 1272 aaKnown RBP26.5■■□□□ 1.83
SOX17-201ENST00000297316 C9orf78Q9NZ63 289 aaPredicted RBP26.5■■□□□ 1.83
SOX17-201ENST00000297316 LRP6O75581 1613 aa26.5■■□□□ 1.83
SOX17-201ENST00000297316 BCL9O00512 1426 aa26.5■■□□□ 1.83
SOX17-201ENST00000297316 BCL9LQ86UU0 1499 aa26.49■■□□□ 1.83
SOX17-201ENST00000297316 PRIM1P49642 420 aaKnown RBP26.49■■□□□ 1.83
SOX17-201ENST00000297316 MYD88Q99836 296 aa26.49■■□□□ 1.83
SOX17-201ENST00000297316 ARFGEF2Q9Y6D5 1785 aa26.49■■□□□ 1.83
SOX17-201ENST00000297316 GSPT1P15170 499 aaKnown RBP26.49■■□□□ 1.83
SOX17-201ENST00000297316 PPP1R42Q7Z4L9 355 aa26.49■■□□□ 1.83
SOX17-201ENST00000297316 RBM42Q9BTD8 480 aaKnown RBP26.49■■□□□ 1.83
SOX17-201ENST00000297316 MARCH10Q8NA82 808 aaPredicted RBP26.48■■□□□ 1.83
SOX17-201ENST00000297316 CDCA7Q9BWT1 371 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms