RNA–Protein interactions for RNA: ENST00000296577.8

ABCE1-201, Transcript of ATP binding cassette subfamily E member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCE1, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-201ENST00000296577 BOLA2Q9H3K6 86 aa11.23□□□□□ -0.61
ABCE1-201ENST00000296577 CWC22Q9HCG8 908 aaKnown RBP11.23□□□□□ -0.61
ABCE1-201ENST00000296577 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
ABCE1-201ENST00000296577 PLEKHG1Q9ULL1 1385 aa11.23□□□□□ -0.61
ABCE1-201ENST00000296577 SOS1Q07889 1333 aaPredicted RBP11.22□□□□□ -0.61
ABCE1-201ENST00000296577 RIMBP3CA6NJZ7 1639 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 RIMBP3BA6NNM3 1639 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 RIMBP3Q9UFD9 1639 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 ARHGEF10O15013 1369 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 FSD2A1L4K1 749 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
ABCE1-201ENST00000296577 CRB1P82279 1406 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 ATP10DQ9P241 1426 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 CDC42BPGQ6DT37 1551 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 GCP02774 474 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 STK3Q13188 491 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 ZSCAN23Q3MJ62 389 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
ABCE1-201ENST00000296577 KLHL40Q2TBA0 621 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 DNTTIP2Q5QJE6 756 aaKnown RBP11.22□□□□□ -0.61
ABCE1-201ENST00000296577 JAKMIP1Q96N16 626 aaKnown RBP11.22□□□□□ -0.61
ABCE1-201ENST00000296577 SMC3Q9UQE7 1217 aa11.22□□□□□ -0.61
ABCE1-201ENST00000296577 IP6K1Q92551 441 aa11.21□□□□□ -0.61
ABCE1-201ENST00000296577 DIP2BQ9P265 1576 aa11.21□□□□□ -0.61
ABCE1-201ENST00000296577 EIF4A1P60842 406 aaKnown RBP11.21□□□□□ -0.61
ABCE1-201ENST00000296577 CCDC83Q8IWF9 413 aa11.21□□□□□ -0.61
ABCE1-201ENST00000296577 FSD1Q9BTV5 496 aa11.21□□□□□ -0.61
ABCE1-201ENST00000296577 DLC1Q96QB1 1528 aa11.21□□□□□ -0.62
ABCE1-201ENST00000296577 ATP5J2-PTCD1G3V325 749 aa11.21□□□□□ -0.62
ABCE1-201ENST00000296577 PTCD1O75127 700 aaKnown RBP11.21□□□□□ -0.62
ABCE1-201ENST00000296577 PPFIA3O75145 1194 aa11.21□□□□□ -0.62
ABCE1-201ENST00000296577 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.62
ABCE1-201ENST00000296577 FERMT3Q86UX7 667 aa11.21□□□□□ -0.62
ABCE1-201ENST00000296577 IL25Q9H293 177 aa11.21□□□□□ -0.62
ABCE1-201ENST00000296577 NDUFB9Q9Y6M9 179 aa11.21□□□□□ -0.62
ABCE1-201ENST00000296577 TTC5Q8N0Z6 440 aa11.2□□□□□ -0.62
ABCE1-201ENST00000296577 DBF4Q9UBU7 674 aaPredicted RBP11.2□□□□□ -0.62
ABCE1-201ENST00000296577 NSFL1CQ9UNZ2 370 aaKnown RBP11.2□□□□□ -0.62
ABCE1-201ENST00000296577 DNAJC2Q99543 621 aaKnown RBP11.2□□□□□ -0.62
ABCE1-201ENST00000296577 OVOS2A0A0J9YW53 1432 aa11.2□□□□□ -0.62
ABCE1-201ENST00000296577 OVOS2Q6IE36 1432 aa11.2□□□□□ -0.62
ABCE1-201ENST00000296577 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
ABCE1-201ENST00000296577 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
ABCE1-201ENST00000296577 MYD88Q99836 296 aa11.2□□□□□ -0.62
ABCE1-201ENST00000296577 LMBRD1Q9NUN5 540 aa11.2□□□□□ -0.62
ABCE1-201ENST00000296577 DDX58O95786 925 aaKnown RBP11.19□□□□□ -0.62
ABCE1-201ENST00000296577 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
ABCE1-201ENST00000296577 CCDC85AQ96PX6 553 aaPredicted RBP11.19□□□□□ -0.62
ABCE1-201ENST00000296577 SPATA31D1Q6ZQQ2 1576 aa11.19□□□□□ -0.62
ABCE1-201ENST00000296577 NFATC2IPQ8NCF5 419 aa11.19□□□□□ -0.62
ABCE1-201ENST00000296577 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
ABCE1-201ENST00000296577 HTATSF1O43719 755 aaKnown RBP11.19□□□□□ -0.62
ABCE1-201ENST00000296577 HSP90AB4PQ58FF6 505 aa11.19□□□□□ -0.62
ABCE1-201ENST00000296577 RBSNQ9H1K0 784 aa11.19□□□□□ -0.62
ABCE1-201ENST00000296577 HSP90B1P14625 803 aaKnown RBP11.18□□□□□ -0.62
ABCE1-201ENST00000296577 RUFY2Q8WXA3 655 aa11.18□□□□□ -0.62
ABCE1-201ENST00000296577 CEP170BQ9Y4F5 1589 aaPredicted RBP11.18□□□□□ -0.62
ABCE1-201ENST00000296577 RGS12O14924 1447 aa11.18□□□□□ -0.62
ABCE1-201ENST00000296577 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
ABCE1-201ENST00000296577 ZKSCAN1P17029 563 aaPredicted RBP11.18□□□□□ -0.62
ABCE1-201ENST00000296577 DDIT3P35638 169 aa11.18□□□□□ -0.62
ABCE1-201ENST00000296577 RNMTO43148 476 aaKnown RBP11.18□□□□□ -0.62
ABCE1-201ENST00000296577 EDC3Q96F86 508 aaKnown RBP11.18□□□□□ -0.62
ABCE1-201ENST00000296577 GOLGA6L4A6NEF3 574 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 RAB11FIP3O75154 756 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 MCM2P49736 904 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 GPT2Q8TD30 523 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 GADD45BO75293 160 aaPredicted RBP11.17□□□□□ -0.62
ABCE1-201ENST00000296577 GLRX3O76003 335 aaKnown RBP11.17□□□□□ -0.62
ABCE1-201ENST00000296577 AKAP4Q5JQC9 854 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 COPS6Q7L5N1 327 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 TMEM63CQ9P1W3 806 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 ZDHHC9Q9Y397 364 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 IBTKQ9P2D0 1353 aaPredicted RBP11.17□□□□□ -0.62
ABCE1-201ENST00000296577 ATF3P18847 181 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 AK2P54819 239 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 SSH3Q8TE77 659 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 CNPY2Q9Y2B0 182 aa11.17□□□□□ -0.62
ABCE1-201ENST00000296577 BEND3Q5T5X7 828 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 XAGE3Q8WTP9 111 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 ECHDC1Q9NTX5 307 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 PDRG1Q9NUG6 133 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 AGLP35573 1532 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 DLG5Q8TDM6 1919 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 SYAP1Q96A49 352 aaPredicted RBP11.16□□□□□ -0.62
ABCE1-201ENST00000296577 BICC1Q9H694 974 aaKnown RBP11.16□□□□□ -0.62
ABCE1-201ENST00000296577 AXIN2Q9Y2T1 843 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
ABCE1-201ENST00000296577 VIRMAQ69YN4 1812 aaKnown RBP11.16□□□□□ -0.62
ABCE1-201ENST00000296577 FAM227BQ96M60 508 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 CHMP4AQ9BY43 222 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 TATP17735 454 aaPredicted RBP11.16□□□□□ -0.62
ABCE1-201ENST00000296577 UBE3BQ7Z3V4 1068 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 USP48Q86UV5 1035 aa11.16□□□□□ -0.62
ABCE1-201ENST00000296577 ANKRD26Q9UPS8 1709 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms