RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ANAPC15P60006 121 aa12.8□□□□□ -0.36
PBRM1-201ENST00000296302 YEATS4O95619 227 aa12.8□□□□□ -0.36
PBRM1-201ENST00000296302 LMAN1P49257 510 aa12.8□□□□□ -0.36
PBRM1-201ENST00000296302 FKBP15Q5T1M5 1219 aa12.8□□□□□ -0.36
PBRM1-201ENST00000296302 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
PBRM1-201ENST00000296302 TFIP11Q9UBB9 837 aaKnown RBP12.8□□□□□ -0.36
PBRM1-201ENST00000296302 PCDHB15Q9Y5E8 787 aa12.8□□□□□ -0.36
PBRM1-201ENST00000296302 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
PBRM1-201ENST00000296302 USO1O60763 962 aaKnown RBP12.8□□□□□ -0.36
PBRM1-201ENST00000296302 CNNM3Q8NE01 707 aa12.8□□□□□ -0.36
PBRM1-201ENST00000296302 ZHX3Q9H4I2 956 aa12.8□□□□□ -0.36
PBRM1-201ENST00000296302 GIMAP6Q6P9H5 292 aa12.79□□□□□ -0.36
PBRM1-201ENST00000296302 ZSCAN16Q9H4T2 348 aaPredicted RBP12.79□□□□□ -0.36
PBRM1-201ENST00000296302 MYL6BP14649 208 aa12.79□□□□□ -0.36
PBRM1-201ENST00000296302 RBM25P49756 843 aaKnown RBP12.79□□□□□ -0.36
PBRM1-201ENST00000296302 SLC26A8Q96RN1 970 aa12.79□□□□□ -0.36
PBRM1-201ENST00000296302 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
PBRM1-201ENST00000296302 MCM10Q7L590 875 aa12.79□□□□□ -0.36
PBRM1-201ENST00000296302 EZRP15311 586 aaKnown RBP12.79□□□□□ -0.36
PBRM1-201ENST00000296302 KLHL10Q6JEL2 608 aa12.79□□□□□ -0.36
PBRM1-201ENST00000296302 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
PBRM1-201ENST00000296302 ATF3P18847 181 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 RAI14Q9P0K7 980 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 CABP4P57796 275 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 ECHDC1Q9NTX5 307 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 IVLP07476 585 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 LUZP1Q86V48 1076 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 SRRTQ9BXP5 876 aaKnown RBP12.78□□□□□ -0.36
PBRM1-201ENST00000296302 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
PBRM1-201ENST00000296302 CTR9Q6PD62 1173 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 CCDC186Q7Z3E2 898 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
PBRM1-201ENST00000296302 ZNF830Q96NB3 372 aaPredicted RBP12.78□□□□□ -0.36
PBRM1-201ENST00000296302 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
PBRM1-201ENST00000296302 SKILP12757 684 aa12.77□□□□□ -0.36
PBRM1-201ENST00000296302 GNG11P61952 73 aa12.77□□□□□ -0.36
PBRM1-201ENST00000296302 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.36
PBRM1-201ENST00000296302 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.36
PBRM1-201ENST00000296302 SCAF11Q99590 1463 aaKnown RBP12.77□□□□□ -0.36
PBRM1-201ENST00000296302 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.36
PBRM1-201ENST00000296302 ARFGAP3Q9NP61 516 aa12.77□□□□□ -0.36
PBRM1-201ENST00000296302 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.36
PBRM1-201ENST00000296302 USP48Q86UV5 1035 aa12.77□□□□□ -0.37
PBRM1-201ENST00000296302 ANKRD62A6NC57 917 aa12.77□□□□□ -0.37
PBRM1-201ENST00000296302 DYDC1Q8WWB3 177 aa12.77□□□□□ -0.37
PBRM1-201ENST00000296302 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.37
PBRM1-201ENST00000296302 CDK13Q14004 1512 aaKnown RBP12.77□□□□□ -0.37
PBRM1-201ENST00000296302 CAMSAP2Q08AD1 1489 aa12.77□□□□□ -0.37
PBRM1-201ENST00000296302 GBP2P32456 591 aaPredicted RBP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 GUCY1B3Q02153 619 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 RNF187Q5TA31 235 aaPredicted RBP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 MPHOSPH8Q99549 860 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 FEZ1Q99689 392 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 F6X3S4 739 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 SLU7O95391 586 aaKnown RBP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 SDSP20132 328 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 SAMD1Q6SPF0 538 aaPredicted RBP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 FGFR1OPO95684 399 aaKnown RBP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 SSBP05455 408 aaKnown RBP eCLIP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 SMAP1Q8IYB5 467 aaPredicted RBP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 CCDC12Q8WUD4 166 aaPredicted RBP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 IDH1O75874 414 aaKnown RBP12.76□□□□□ -0.37
PBRM1-201ENST00000296302 MAPKBP1O60336 1514 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 ESCO1Q5FWF5 840 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 DNAAF4Q8WXU2 420 aa12.76□□□□□ -0.37
PBRM1-201ENST00000296302 RALGAPBQ86X10 1494 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 KANK3Q6NY19 840 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 CACNA2D4Q7Z3S7 1137 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
PBRM1-201ENST00000296302 SEPT11Q9NVA2 429 aaKnown RBP12.75□□□□□ -0.37
PBRM1-201ENST00000296302 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 BIN1O00499 593 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 IFFO1Q0D2I5 559 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 ANO6Q4KMQ2 910 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 VPS36Q86VN1 386 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 EHBP1Q8NDI1 1231 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 ALS2CR12Q96Q35 445 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 TTC12Q9H892 705 aaPredicted RBP12.75□□□□□ -0.37
PBRM1-201ENST00000296302 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 CNPY2Q9Y2B0 182 aa12.75□□□□□ -0.37
PBRM1-201ENST00000296302 IFIT1P09914 478 aaKnown RBP12.75□□□□□ -0.37
PBRM1-201ENST00000296302 NUDT16Q96DE0 195 aaKnown RBP12.75□□□□□ -0.37
PBRM1-201ENST00000296302 FLIIQ13045 1269 aa12.74□□□□□ -0.37
PBRM1-201ENST00000296302 CCDC102BQ68D86 513 aa12.74□□□□□ -0.37
PBRM1-201ENST00000296302 TSG101Q99816 390 aa12.74□□□□□ -0.37
PBRM1-201ENST00000296302 LARP6Q9BRS8 491 aaKnown RBP12.74□□□□□ -0.37
PBRM1-201ENST00000296302 PARD3Q8TEW0 1356 aa12.74□□□□□ -0.37
PBRM1-201ENST00000296302 GOLGA8BA8MQT2 603 aa12.74□□□□□ -0.37
PBRM1-201ENST00000296302 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
PBRM1-201ENST00000296302 PPP1R12BO60237 982 aaPredicted RBP12.74□□□□□ -0.37
PBRM1-201ENST00000296302 PYM1Q9BRP8 204 aaKnown RBP12.74□□□□□ -0.37
PBRM1-201ENST00000296302 CCDC8Q9H0W5 538 aaPredicted RBP12.74□□□□□ -0.37
PBRM1-201ENST00000296302 OGFRQ9NZT2 677 aa12.74□□□□□ -0.37
PBRM1-201ENST00000296302 TERF1P54274 439 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms