RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 RFC4P35249 363 aa15.83■□□□□ 0.12
HPS3-201ENST00000296051 DDB1Q16531 1140 aa15.83■□□□□ 0.12
HPS3-201ENST00000296051 ZNF622Q969S3 477 aaKnown RBP eCLIP15.83■□□□□ 0.12
HPS3-201ENST00000296051 CNPY2Q9Y2B0 182 aa15.83■□□□□ 0.12
HPS3-201ENST00000296051 NOC3LQ8WTT2 800 aaKnown RBP15.82■□□□□ 0.12
HPS3-201ENST00000296051 MYD88Q99836 296 aa15.82■□□□□ 0.12
HPS3-201ENST00000296051 LRRFIP2Q9Y608 721 aaKnown RBP15.82■□□□□ 0.12
HPS3-201ENST00000296051 ASXL1Q8IXJ9 1541 aa15.82■□□□□ 0.12
HPS3-201ENST00000296051 USP48Q86UV5 1035 aa15.82■□□□□ 0.12
HPS3-201ENST00000296051 AACSQ86V21 672 aa15.82■□□□□ 0.12
HPS3-201ENST00000296051 RPGRQ92834 1020 aaKnown RBP15.82■□□□□ 0.12
HPS3-201ENST00000296051 TNNT1P13805 278 aa15.81■□□□□ 0.12
HPS3-201ENST00000296051 NACAP1Q9BZK3 213 aa15.81■□□□□ 0.12
HPS3-201ENST00000296051 PLCH2O75038 1416 aa15.81■□□□□ 0.12
HPS3-201ENST00000296051 GPS2Q13227 327 aa15.81■□□□□ 0.12
HPS3-201ENST00000296051 HSP90AB2PQ58FF8 381 aa15.81■□□□□ 0.12
HPS3-201ENST00000296051 LRRC59Q96AG4 307 aaKnown RBP15.81■□□□□ 0.12
HPS3-201ENST00000296051 CCDC66A2RUB6 948 aa15.81■□□□□ 0.12
HPS3-201ENST00000296051 NAT10Q9H0A0 1025 aaKnown RBP15.81■□□□□ 0.12
HPS3-201ENST00000296051 CFAP43Q8NDM7 1665 aa15.8■□□□□ 0.12
HPS3-201ENST00000296051 TTLL12Q14166 644 aaPredicted RBP15.8■□□□□ 0.12
HPS3-201ENST00000296051 STK38Q15208 465 aa15.8■□□□□ 0.12
HPS3-201ENST00000296051 LARP1Q6PKG0 1096 aaKnown RBP15.8■□□□□ 0.12
HPS3-201ENST00000296051 AEBP1Q8IUX7 1158 aa15.8■□□□□ 0.12
HPS3-201ENST00000296051 CCDC47Q96A33 483 aaKnown RBP15.8■□□□□ 0.12
HPS3-201ENST00000296051 TCOF1Q13428 1488 aaKnown RBP15.8■□□□□ 0.12
HPS3-201ENST00000296051 STX6O43752 255 aa15.8■□□□□ 0.12
HPS3-201ENST00000296051 NECAB1Q8N987 351 aa15.8■□□□□ 0.12
HPS3-201ENST00000296051 PHACTR3Q96KR7 559 aa15.8■□□□□ 0.12
HPS3-201ENST00000296051 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.8■□□□□ 0.12
HPS3-201ENST00000296051 V9GYY5 206 aaPredicted RBP15.8■□□□□ 0.12
HPS3-201ENST00000296051 GUCY1B3Q02153 619 aa15.79■□□□□ 0.12
HPS3-201ENST00000296051 PKP1Q13835 747 aa15.79■□□□□ 0.12
HPS3-201ENST00000296051 ABCC11Q96J66 1382 aa15.79■□□□□ 0.12
HPS3-201ENST00000296051 ZBTB9Q96C00 473 aa15.79■□□□□ 0.12
HPS3-201ENST00000296051 PLEKHM2Q8IWE5 1019 aa15.79■□□□□ 0.12
HPS3-201ENST00000296051 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.79■□□□□ 0.12
HPS3-201ENST00000296051 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
HPS3-201ENST00000296051 KDM5BQ9UGL1 1544 aa15.79■□□□□ 0.12
HPS3-201ENST00000296051 RAB11FIP3O75154 756 aa15.79■□□□□ 0.12
HPS3-201ENST00000296051 XBP1P17861 261 aa15.79■□□□□ 0.12
HPS3-201ENST00000296051 RBM25P49756 843 aaKnown RBP15.78■□□□□ 0.12
HPS3-201ENST00000296051 BRPF1P55201 1214 aaPredicted RBP15.78■□□□□ 0.12
HPS3-201ENST00000296051 ZMYM3Q14202 1370 aa15.78■□□□□ 0.12
HPS3-201ENST00000296051 ZCRB1Q8TBF4 217 aaKnown RBP15.78■□□□□ 0.12
HPS3-201ENST00000296051 PCMTD1Q96MG8 357 aaPredicted RBP15.78■□□□□ 0.12
HPS3-201ENST00000296051 LIMCH1Q9UPQ0 1083 aa15.78■□□□□ 0.12
HPS3-201ENST00000296051 ANXA1P04083 346 aa15.78■□□□□ 0.12
HPS3-201ENST00000296051 ATP5J2-PTCD1G3V325 749 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 VAMP4O75379 141 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 MCM5P33992 734 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 BOLA2Q9H3K6 86 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 A2MP01023 1474 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 KDM6BO15054 1643 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 GJB2P29033 226 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 TDO2P48775 406 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 PDE1AP54750 535 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 PTPN14Q15678 1187 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 ZMYM4Q5VZL5 1548 aa15.77■□□□□ 0.12
HPS3-201ENST00000296051 A0A087WZG4 1122 aa15.77■□□□□ 0.11
HPS3-201ENST00000296051 SERPINC1P01008 464 aa15.77■□□□□ 0.11
HPS3-201ENST00000296051 TSR1Q2NL82 804 aaKnown RBP15.77■□□□□ 0.11
HPS3-201ENST00000296051 MRPL50Q8N5N7 158 aaKnown RBP15.77■□□□□ 0.11
HPS3-201ENST00000296051 ANTXR1Q9H6X2 564 aa15.77■□□□□ 0.11
HPS3-201ENST00000296051 BRMS1Q9HCU9 246 aa15.77■□□□□ 0.11
HPS3-201ENST00000296051 CLIP2Q9UDT6 1046 aa15.77■□□□□ 0.11
HPS3-201ENST00000296051 IFIT5Q13325 482 aaKnown RBP15.76■□□□□ 0.11
HPS3-201ENST00000296051 TRAPPC8Q9Y2L5 1435 aa15.76■□□□□ 0.11
HPS3-201ENST00000296051 CD2BP2O95400 341 aaKnown RBP15.76■□□□□ 0.11
HPS3-201ENST00000296051 IFIT1P09914 478 aaKnown RBP15.76■□□□□ 0.11
HPS3-201ENST00000296051 TMEM132AQ24JP5 1023 aa15.76■□□□□ 0.11
HPS3-201ENST00000296051 CCDC186Q7Z3E2 898 aa15.76■□□□□ 0.11
HPS3-201ENST00000296051 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
HPS3-201ENST00000296051 POLR3AO14802 1390 aaPredicted RBP15.76■□□□□ 0.11
HPS3-201ENST00000296051 WDR7Q9Y4E6 1490 aa15.76■□□□□ 0.11
HPS3-201ENST00000296051 CAVIN4Q5BKX8 364 aa15.76■□□□□ 0.11
HPS3-201ENST00000296051 CCDC8Q9H0W5 538 aaPredicted RBP15.76■□□□□ 0.11
HPS3-201ENST00000296051 NUP133Q8WUM0 1156 aa15.76■□□□□ 0.11
HPS3-201ENST00000296051 USP26Q9BXU7 913 aa15.76■□□□□ 0.11
HPS3-201ENST00000296051 TPM1P09493 284 aa15.75■□□□□ 0.11
HPS3-201ENST00000296051 TFCP2L1Q9NZI6 479 aa15.75■□□□□ 0.11
HPS3-201ENST00000296051 ZBTB7BO15156 539 aaPredicted RBP15.75■□□□□ 0.11
HPS3-201ENST00000296051 WDR78Q5VTH9 848 aa15.75■□□□□ 0.11
HPS3-201ENST00000296051 CPA1P15085 419 aa15.75■□□□□ 0.11
HPS3-201ENST00000296051 DNM1Q05193 864 aaKnown RBP15.75■□□□□ 0.11
HPS3-201ENST00000296051 SLC39A6Q13433 755 aa15.75■□□□□ 0.11
HPS3-201ENST00000296051 COL17A1Q9UMD9 1497 aaPredicted RBP15.75■□□□□ 0.11
HPS3-201ENST00000296051 RAPGEF6Q8TEU7 1601 aa15.75■□□□□ 0.11
HPS3-201ENST00000296051 ZNF165P49910 485 aa15.74■□□□□ 0.11
HPS3-201ENST00000296051 GRM1Q13255 1194 aa15.74■□□□□ 0.11
HPS3-201ENST00000296051 NOL7Q9UMY1 257 aaKnown RBP15.74■□□□□ 0.11
HPS3-201ENST00000296051 BLMP54132 1417 aaPredicted RBP15.74■□□□□ 0.11
HPS3-201ENST00000296051 POLR3GO15318 223 aaPredicted RBP15.74■□□□□ 0.11
HPS3-201ENST00000296051 ATP6V1AP38606 617 aa15.74■□□□□ 0.11
HPS3-201ENST00000296051 HSP90AB3PQ58FF7 597 aa15.74■□□□□ 0.11
HPS3-201ENST00000296051 ANKRD44Q8N8A2 993 aa15.74■□□□□ 0.11
HPS3-201ENST00000296051 TMX1Q9H3N1 280 aa15.74■□□□□ 0.11
HPS3-201ENST00000296051 DBF4Q9UBU7 674 aaPredicted RBP15.74■□□□□ 0.11
HPS3-201ENST00000296051 PIK3C2GO75747 1445 aa15.74■□□□□ 0.11
HPS3-201ENST00000296051 TTC21BQ7Z4L5 1316 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms