RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TJP1Q07157 1748 aa19.45■□□□□ 0.7
CCDC140-201ENST00000295226 PLSCR1O15162 318 aa19.45■□□□□ 0.7
CCDC140-201ENST00000295226 TXNRD1Q16881 649 aa19.45■□□□□ 0.7
CCDC140-201ENST00000295226 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
CCDC140-201ENST00000295226 SLC4A2P04920 1241 aa19.44■□□□□ 0.7
CCDC140-201ENST00000295226 MYL6BP14649 208 aa19.44■□□□□ 0.7
CCDC140-201ENST00000295226 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
CCDC140-201ENST00000295226 TEX13AQ9BXU3 409 aaPredicted RBP19.44■□□□□ 0.7
CCDC140-201ENST00000295226 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
CCDC140-201ENST00000295226 STARD3NLO95772 234 aa19.43■□□□□ 0.7
CCDC140-201ENST00000295226 SF3B2Q13435 895 aaKnown RBP19.43■□□□□ 0.7
CCDC140-201ENST00000295226 PDIA6Q15084 440 aa19.43■□□□□ 0.7
CCDC140-201ENST00000295226 EZH2Q15910 746 aaKnown RBP19.43■□□□□ 0.7
CCDC140-201ENST00000295226 NBPF14Q5TI25 921 aa19.43■□□□□ 0.7
CCDC140-201ENST00000295226 NBPF10Q6P3W6 841 aaKnown RBP19.43■□□□□ 0.7
CCDC140-201ENST00000295226 G2E3Q7L622 706 aa19.43■□□□□ 0.7
CCDC140-201ENST00000295226 MRPL50Q8N5N7 158 aaKnown RBP19.43■□□□□ 0.7
CCDC140-201ENST00000295226 NBPF15Q8N660 670 aa19.43■□□□□ 0.7
CCDC140-201ENST00000295226 SOS1Q07889 1333 aaPredicted RBP19.43■□□□□ 0.7
CCDC140-201ENST00000295226 PLIN1O60240 522 aa19.42■□□□□ 0.7
CCDC140-201ENST00000295226 NEFLP07196 543 aa19.42■□□□□ 0.7
CCDC140-201ENST00000295226 CANXP27824 592 aaKnown RBP19.42■□□□□ 0.7
CCDC140-201ENST00000295226 CRKLP46109 303 aaKnown RBP19.42■□□□□ 0.7
CCDC140-201ENST00000295226 ALDH1L2Q3SY69 923 aa19.42■□□□□ 0.7
CCDC140-201ENST00000295226 SMIM5Q71RC9 77 aa19.42■□□□□ 0.7
CCDC140-201ENST00000295226 STK31Q9BXU1 1019 aa19.42■□□□□ 0.7
CCDC140-201ENST00000295226 PHAXQ9H814 394 aaKnown RBP19.42■□□□□ 0.7
CCDC140-201ENST00000295226 LAMB4A4D0S4 1761 aa19.41■□□□□ 0.7
CCDC140-201ENST00000295226 INTS5Q6P9B9 1019 aaKnown RBP19.41■□□□□ 0.7
CCDC140-201ENST00000295226 ZNF428Q96B54 188 aa19.41■□□□□ 0.7
CCDC140-201ENST00000295226 CAMKK2Q96RR4 588 aa19.41■□□□□ 0.7
CCDC140-201ENST00000295226 ZBTB1Q9Y2K1 713 aa19.41■□□□□ 0.7
CCDC140-201ENST00000295226 FRAT1Q92837 279 aaPredicted RBP19.4■□□□□ 0.7
CCDC140-201ENST00000295226 DBF4Q9UBU7 674 aaPredicted RBP19.4■□□□□ 0.7
CCDC140-201ENST00000295226 ZNF330Q9Y3S2 320 aaPredicted RBP19.4■□□□□ 0.7
CCDC140-201ENST00000295226 MYH14Q7Z406 1995 aaKnown RBP19.4■□□□□ 0.7
CCDC140-201ENST00000295226 SLC27A3Q5K4L6 730 aa19.4■□□□□ 0.7
CCDC140-201ENST00000295226 UPF1Q92900 1129 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCDC140-201ENST00000295226 DDX21Q9NR30 783 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCDC140-201ENST00000295226 NOB1Q9ULX3 412 aaKnown RBP19.4■□□□□ 0.7
CCDC140-201ENST00000295226 BAG6P46379 1132 aa19.39■□□□□ 0.69
CCDC140-201ENST00000295226 CCDC87Q9NVE4 849 aa19.39■□□□□ 0.69
CCDC140-201ENST00000295226 AIMP1Q12904 312 aaKnown RBP19.38■□□□□ 0.69
CCDC140-201ENST00000295226 LRP10Q7Z4F1 713 aa19.38■□□□□ 0.69
CCDC140-201ENST00000295226 TNNQ9UQP3 1299 aa19.38■□□□□ 0.69
CCDC140-201ENST00000295226 TAF1LQ8IZX4 1826 aa19.38■□□□□ 0.69
CCDC140-201ENST00000295226 COL5A3P25940 1745 aaPredicted RBP19.37■□□□□ 0.69
CCDC140-201ENST00000295226 ZNF831Q5JPB2 1677 aa19.37■□□□□ 0.69
CCDC140-201ENST00000295226 AMIGO3Q86WK7 504 aa19.36■□□□□ 0.69
CCDC140-201ENST00000295226 COPS6Q7L5N1 327 aa19.36■□□□□ 0.69
CCDC140-201ENST00000295226 CCDC125Q86Z20 511 aa19.36■□□□□ 0.69
CCDC140-201ENST00000295226 XAGE3Q8WTP9 111 aa19.36■□□□□ 0.69
CCDC140-201ENST00000295226 ARXQ96QS3 562 aa19.36■□□□□ 0.69
CCDC140-201ENST00000295226 CHMP4AQ9BY43 222 aa19.36■□□□□ 0.69
CCDC140-201ENST00000295226 HYPKQ9NX55 129 aa19.36■□□□□ 0.69
CCDC140-201ENST00000295226 CICQ96RK0 1608 aaPredicted RBP19.35■□□□□ 0.69
CCDC140-201ENST00000295226 GNPATO15228 680 aa19.35■□□□□ 0.69
CCDC140-201ENST00000295226 FLIIQ13045 1269 aa19.35■□□□□ 0.69
CCDC140-201ENST00000295226 CNTNAP4Q9C0A0 1308 aa19.34■□□□□ 0.69
CCDC140-201ENST00000295226 TTLL7Q6ZT98 887 aa19.34■□□□□ 0.69
CCDC140-201ENST00000295226 C4BP0C0L5 1744 aa19.34■□□□□ 0.69
CCDC140-201ENST00000295226 ERBB4Q15303 1308 aa19.34■□□□□ 0.69
CCDC140-201ENST00000295226 BRPF1P55201 1214 aaPredicted RBP19.33■□□□□ 0.69
CCDC140-201ENST00000295226 RRP1P56182 461 aaKnown RBP19.33■□□□□ 0.69
CCDC140-201ENST00000295226 RC3H1Q5TC82 1133 aaKnown RBP19.33■□□□□ 0.69
CCDC140-201ENST00000295226 CACNA1FO60840 1977 aa19.33■□□□□ 0.68
CCDC140-201ENST00000295226 F6X3S4 739 aa19.33■□□□□ 0.68
CCDC140-201ENST00000295226 FKBP5Q13451 457 aaPredicted RBP19.33■□□□□ 0.68
CCDC140-201ENST00000295226 ZNF827Q17R98 1081 aa19.33■□□□□ 0.68
CCDC140-201ENST00000295226 CLUAP1Q96AJ1 413 aa19.33■□□□□ 0.68
CCDC140-201ENST00000295226 AK7Q96M32 723 aa19.33■□□□□ 0.68
CCDC140-201ENST00000295226 PHF14O94880 888 aa19.32■□□□□ 0.68
CCDC140-201ENST00000295226 EIF5P55010 431 aaKnown RBP19.32■□□□□ 0.68
CCDC140-201ENST00000295226 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
CCDC140-201ENST00000295226 TBC1D2BQ9UPU7 963 aa19.32■□□□□ 0.68
CCDC140-201ENST00000295226 KIF16BQ96L93 1317 aa19.32■□□□□ 0.68
CCDC140-201ENST00000295226 RGPD3A6NKT7 1758 aaPredicted RBP19.31■□□□□ 0.68
CCDC140-201ENST00000295226 RGPD4Q7Z3J3 1758 aa19.31■□□□□ 0.68
CCDC140-201ENST00000295226 RPS6KA4O75676 772 aa19.31■□□□□ 0.68
CCDC140-201ENST00000295226 IL6STP40189 918 aaPredicted RBP19.31■□□□□ 0.68
CCDC140-201ENST00000295226 IRX6P78412 446 aaPredicted RBP19.31■□□□□ 0.68
CCDC140-201ENST00000295226 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
CCDC140-201ENST00000295226 TRIM27P14373 513 aa19.3■□□□□ 0.68
CCDC140-201ENST00000295226 ANO8Q9HCE9 1232 aaPredicted RBP19.3■□□□□ 0.68
CCDC140-201ENST00000295226 RREB1Q92766 1687 aa19.3■□□□□ 0.68
CCDC140-201ENST00000295226 PI4KAP2A4QPH2 592 aa19.3■□□□□ 0.68
CCDC140-201ENST00000295226 ATF7IPQ6VMQ6 1270 aa19.3■□□□□ 0.68
CCDC140-201ENST00000295226 PI4KAP1Q8N8J0 262 aa19.3■□□□□ 0.68
CCDC140-201ENST00000295226 AKT1S1Q96B36 256 aa19.3■□□□□ 0.68
CCDC140-201ENST00000295226 ZBTB3Q9H5J0 574 aa19.3■□□□□ 0.68
CCDC140-201ENST00000295226 RTCBQ9Y3I0 505 aaKnown RBP19.3■□□□□ 0.68
CCDC140-201ENST00000295226 RNF123Q5XPI4 1314 aa19.29■□□□□ 0.68
CCDC140-201ENST00000295226 IPO8O15397 1037 aaKnown RBP19.29■□□□□ 0.68
CCDC140-201ENST00000295226 RLBP1P12271 317 aa19.29■□□□□ 0.68
CCDC140-201ENST00000295226 PANK1Q8TE04 598 aa19.29■□□□□ 0.68
CCDC140-201ENST00000295226 ANKRD13DQ6ZTN6 518 aa19.28■□□□□ 0.68
CCDC140-201ENST00000295226 NPM2Q86SE8 214 aaKnown RBP19.28■□□□□ 0.68
CCDC140-201ENST00000295226 DZIP3Q86Y13 1208 aaKnown RBP19.28■□□□□ 0.68
CCDC140-201ENST00000295226 TFCP2L1Q9NZI6 479 aa19.28■□□□□ 0.68
CCDC140-201ENST00000295226 PTPRCP08575 1304 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms