RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 LRP10Q7Z4F1 713 aa11.45□□□□□ -0.58
PDPN-201ENST00000294489 RPAP2Q8IXW5 612 aaPredicted RBP11.45□□□□□ -0.58
PDPN-201ENST00000294489 DOT1LQ8TEK3 1739 aa11.45□□□□□ -0.58
PDPN-201ENST00000294489 CHD1LQ86WJ1 897 aa11.45□□□□□ -0.58
PDPN-201ENST00000294489 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDPN-201ENST00000294489 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
PDPN-201ENST00000294489 SPATA31A1Q5TZJ5 1347 aa11.45□□□□□ -0.58
PDPN-201ENST00000294489 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
PDPN-201ENST00000294489 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
PDPN-201ENST00000294489 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
PDPN-201ENST00000294489 ZNF496Q96IT1 587 aaPredicted RBP11.44□□□□□ -0.58
PDPN-201ENST00000294489 MEIS3Q99687 375 aa11.44□□□□□ -0.58
PDPN-201ENST00000294489 CDCA7Q9BWT1 371 aaPredicted RBP11.44□□□□□ -0.58
PDPN-201ENST00000294489 JCADQ9P266 1359 aa11.44□□□□□ -0.58
PDPN-201ENST00000294489 SLC39A6Q13433 755 aa11.44□□□□□ -0.58
PDPN-201ENST00000294489 CEP85Q6P2H3 762 aa11.44□□□□□ -0.58
PDPN-201ENST00000294489 UPF2Q9HAU5 1272 aaKnown RBP11.44□□□□□ -0.58
PDPN-201ENST00000294489 SNRPA1P09661 255 aaKnown RBP11.44□□□□□ -0.58
PDPN-201ENST00000294489 FMNL2Q96PY5 1086 aa11.44□□□□□ -0.58
PDPN-201ENST00000294489 EIF2S2P20042 333 aaKnown RBP11.43□□□□□ -0.58
PDPN-201ENST00000294489 BEND3Q5T5X7 828 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 DCTPP1Q9H773 170 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 ERBB4Q15303 1308 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 SPATA31A5Q5VU36 1347 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 SPATA31A7Q8IWB4 1347 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 UBAP1LF5GYI3 381 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 PROSER3Q2NL68 480 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 ANKRD45Q5TZF3 282 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 SLC4A10Q6U841 1118 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 LNPKQ9C0E8 428 aa11.43□□□□□ -0.58
PDPN-201ENST00000294489 ZNF831Q5JPB2 1677 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 TJP1Q07157 1748 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 BARGINQ6ZT62 677 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 RREB1Q92766 1687 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 GNAI3P08754 354 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 KSR2Q6VAB6 950 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 DNAAF4Q8WXU2 420 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 USP44Q9H0E7 712 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 BCL9O00512 1426 aa11.42□□□□□ -0.58
PDPN-201ENST00000294489 THSD7AQ9UPZ6 1657 aa11.41□□□□□ -0.58
PDPN-201ENST00000294489 AFDNP55196 1824 aaKnown RBP11.41□□□□□ -0.58
PDPN-201ENST00000294489 TUBGCP6Q96RT7 1819 aa11.41□□□□□ -0.58
PDPN-201ENST00000294489 BCL9LQ86UU0 1499 aa11.41□□□□□ -0.58
PDPN-201ENST00000294489 TTC5Q8N0Z6 440 aa11.41□□□□□ -0.58
PDPN-201ENST00000294489 CERKQ8TCT0 537 aa11.41□□□□□ -0.58
PDPN-201ENST00000294489 UTYO14607 1347 aa11.41□□□□□ -0.58
PDPN-201ENST00000294489 SPATA31A6Q5VVP1 1343 aa11.41□□□□□ -0.58
PDPN-201ENST00000294489 ALDH1L1O75891 902 aa11.4□□□□□ -0.58
PDPN-201ENST00000294489 GNAI2P04899 355 aa11.4□□□□□ -0.58
PDPN-201ENST00000294489 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
PDPN-201ENST00000294489 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
PDPN-201ENST00000294489 USP16Q9Y5T5 823 aa11.4□□□□□ -0.58
PDPN-201ENST00000294489 DDX54Q8TDD1 881 aaKnown RBP11.4□□□□□ -0.59
PDPN-201ENST00000294489 SRCIN1Q9C0H9 1055 aa11.4□□□□□ -0.59
PDPN-201ENST00000294489 HMMRO75330 724 aa11.39□□□□□ -0.59
PDPN-201ENST00000294489 SEC24BO95487 1268 aa11.39□□□□□ -0.59
PDPN-201ENST00000294489 VSIG10Q8N0Z9 540 aa11.39□□□□□ -0.59
PDPN-201ENST00000294489 ATP8B2P98198 1209 aa11.39□□□□□ -0.59
PDPN-201ENST00000294489 FNBP4Q8N3X1 1017 aaPredicted RBP11.39□□□□□ -0.59
PDPN-201ENST00000294489 ADAMTS2O95450 1211 aa11.38□□□□□ -0.59
PDPN-201ENST00000294489 ANXA1P04083 346 aa11.38□□□□□ -0.59
PDPN-201ENST00000294489 EXOC5O00471 708 aa11.38□□□□□ -0.59
PDPN-201ENST00000294489 MAP3K2Q9Y2U5 619 aa11.38□□□□□ -0.59
PDPN-201ENST00000294489 COL15A1P39059 1388 aa11.38□□□□□ -0.59
PDPN-201ENST00000294489 EIF5BO60841 1220 aaKnown RBP11.38□□□□□ -0.59
PDPN-201ENST00000294489 DDX58O95786 925 aaKnown RBP11.38□□□□□ -0.59
PDPN-201ENST00000294489 UNC5CLQ8IV45 518 aa11.38□□□□□ -0.59
PDPN-201ENST00000294489 PIGBQ92521 554 aa11.38□□□□□ -0.59
PDPN-201ENST00000294489 USP35Q9P2H5 1018 aa11.38□□□□□ -0.59
PDPN-201ENST00000294489 POLA2Q14181 598 aa11.37□□□□□ -0.59
PDPN-201ENST00000294489 VPS72Q15906 364 aa11.37□□□□□ -0.59
PDPN-201ENST00000294489 BMP2KLQ5H9B9 411 aa11.37□□□□□ -0.59
PDPN-201ENST00000294489 TMOD3Q9NYL9 352 aa11.37□□□□□ -0.59
PDPN-201ENST00000294489 LINS1Q8NG48 757 aa11.37□□□□□ -0.59
PDPN-201ENST00000294489 MTX1Q13505 466 aa11.36□□□□□ -0.59
PDPN-201ENST00000294489 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
PDPN-201ENST00000294489 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
PDPN-201ENST00000294489 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
PDPN-201ENST00000294489 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
PDPN-201ENST00000294489 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
PDPN-201ENST00000294489 SSH3Q8TE77 659 aa11.36□□□□□ -0.59
PDPN-201ENST00000294489 COL5A3P25940 1745 aaPredicted RBP11.36□□□□□ -0.59
PDPN-201ENST00000294489 ANKRD36CQ5JPF3 1778 aa11.36□□□□□ -0.59
PDPN-201ENST00000294489 UBTFL1P0CB47 393 aaPredicted RBP11.35□□□□□ -0.59
PDPN-201ENST00000294489 XAGE3Q8WTP9 111 aa11.35□□□□□ -0.59
PDPN-201ENST00000294489 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
PDPN-201ENST00000294489 NUTM2BA6NNL0 878 aaPredicted RBP11.35□□□□□ -0.59
PDPN-201ENST00000294489 NUTM2EB1AL46 878 aaPredicted RBP11.35□□□□□ -0.59
PDPN-201ENST00000294489 NUTM2AQ8IVF1 878 aaPredicted RBP11.35□□□□□ -0.59
PDPN-201ENST00000294489 TBC1D32Q96NH3 1257 aa11.35□□□□□ -0.59
PDPN-201ENST00000294489 LRRFIP2Q9Y608 721 aaKnown RBP11.35□□□□□ -0.59
PDPN-201ENST00000294489 IGKV5-2P06315 115 aa11.35□□□□□ -0.59
PDPN-201ENST00000294489 TEX13AQ9BXU3 409 aaPredicted RBP11.35□□□□□ -0.59
PDPN-201ENST00000294489 NBPF7P0C2Y1 421 aaPredicted RBP11.34□□□□□ -0.59
PDPN-201ENST00000294489 COPS6Q7L5N1 327 aa11.34□□□□□ -0.59
PDPN-201ENST00000294489 NHSQ6T4R5 1651 aa11.34□□□□□ -0.59
PDPN-201ENST00000294489 PNMA6EA0A0J9YXQ4 647 aa11.34□□□□□ -0.59
PDPN-201ENST00000294489 BECN1Q14457 450 aa11.34□□□□□ -0.59
PDPN-201ENST00000294489 PLBD2Q8NHP8 589 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms