RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 IQCGQ9H095 443 aaKnown RBP14.37□□□□□ -0.11
SLX4-201ENST00000294008 GEN1Q17RS7 908 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 PDRG1Q9NUG6 133 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 CUX2O14529 1486 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 SPOUT1Q5T280 376 aaKnown RBP14.37□□□□□ -0.11
SLX4-201ENST00000294008 ANAPC4Q9UJX5 808 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 CARMIL1Q5VZK9 1371 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 RIOK3O14730 519 aaKnown RBP14.37□□□□□ -0.11
SLX4-201ENST00000294008 KRT85P78386 507 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 RASA3Q14644 834 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 IDEP14735 1019 aa14.36□□□□□ -0.11
SLX4-201ENST00000294008 CCDC6Q16204 474 aa14.36□□□□□ -0.11
SLX4-201ENST00000294008 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
SLX4-201ENST00000294008 CRCPO75575 148 aa14.36□□□□□ -0.11
SLX4-201ENST00000294008 GABPAQ06546 454 aa14.36□□□□□ -0.11
SLX4-201ENST00000294008 CUL4BQ13620 913 aa14.36□□□□□ -0.11
SLX4-201ENST00000294008 BLOC1S2Q6QNY1 142 aa14.36□□□□□ -0.11
SLX4-201ENST00000294008 MPRIPQ6WCQ1 1025 aa14.36□□□□□ -0.11
SLX4-201ENST00000294008 PPP1R12AO14974 1030 aaPredicted RBP14.36□□□□□ -0.11
SLX4-201ENST00000294008 BCAR3O75815 825 aa14.36□□□□□ -0.11
SLX4-201ENST00000294008 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
SLX4-201ENST00000294008 STARD3NLO95772 234 aa14.35□□□□□ -0.11
SLX4-201ENST00000294008 MTIF2P46199 727 aaKnown RBP14.35□□□□□ -0.11
SLX4-201ENST00000294008 CSPG5O95196 566 aa14.35□□□□□ -0.11
SLX4-201ENST00000294008 KIF4BQ2VIQ3 1234 aa14.35□□□□□ -0.11
SLX4-201ENST00000294008 TRAK2O60296 914 aa14.35□□□□□ -0.11
SLX4-201ENST00000294008 SP4Q02446 784 aa14.35□□□□□ -0.11
SLX4-201ENST00000294008 ZBTB16Q05516 673 aa14.35□□□□□ -0.11
SLX4-201ENST00000294008 PPME1Q9Y570 386 aa14.35□□□□□ -0.11
SLX4-201ENST00000294008 TCHPQ9BT92 498 aa14.35□□□□□ -0.11
SLX4-201ENST00000294008 POLR3GO15318 223 aaPredicted RBP14.34□□□□□ -0.11
SLX4-201ENST00000294008 STX6O43752 255 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 RSPH3Q86UC2 560 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 BANK1Q8NDB2 785 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 ZBTB9Q96C00 473 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 IL1RAPL2Q9NP60 686 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 SMTNL1A8MU46 457 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 GSTA5Q7RTV2 222 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 NOD1Q9Y239 953 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 KMT5BQ4FZB7 885 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 NAPBQ9H115 298 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 CLGNO14967 610 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 EPSTI1Q96J88 318 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 RAB34Q9BZG1 259 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 ZBTB21Q9ULJ3 1066 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 EEF2P13639 858 aaKnown RBP14.34□□□□□ -0.11
SLX4-201ENST00000294008 ERCC5P28715 1186 aaPredicted RBP14.34□□□□□ -0.11
SLX4-201ENST00000294008 CTCFLQ8NI51 663 aaPredicted RBP14.34□□□□□ -0.11
SLX4-201ENST00000294008 CLSTN2Q9H4D0 955 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 CTNNA3Q9UI47 895 aa14.34□□□□□ -0.11
SLX4-201ENST00000294008 ZBTB24O43167 697 aaPredicted RBP14.33□□□□□ -0.11
SLX4-201ENST00000294008 CCT6BQ92526 530 aa14.33□□□□□ -0.11
SLX4-201ENST00000294008 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.11
SLX4-201ENST00000294008 TMOD3Q9NYL9 352 aa14.33□□□□□ -0.12
SLX4-201ENST00000294008 NCBP1Q09161 790 aaKnown RBP14.33□□□□□ -0.12
SLX4-201ENST00000294008 CCDC194A0A1B0GVG4 234 aa14.33□□□□□ -0.12
SLX4-201ENST00000294008 PAFAH1B1P43034 410 aa14.33□□□□□ -0.12
SLX4-201ENST00000294008 CCDC65Q8IXS2 484 aa14.32□□□□□ -0.12
SLX4-201ENST00000294008 MBD3O95983 291 aa14.32□□□□□ -0.12
SLX4-201ENST00000294008 TWISTNBQ3B726 338 aaPredicted RBP14.32□□□□□ -0.12
SLX4-201ENST00000294008 ATF7IPQ6VMQ6 1270 aa14.32□□□□□ -0.12
SLX4-201ENST00000294008 WAPLQ7Z5K2 1190 aa14.32□□□□□ -0.12
SLX4-201ENST00000294008 PRKAR2BP31323 418 aa14.32□□□□□ -0.12
SLX4-201ENST00000294008 ERCC3P19447 782 aa14.32□□□□□ -0.12
SLX4-201ENST00000294008 NUP62CLQ9H1M0 184 aa14.32□□□□□ -0.12
SLX4-201ENST00000294008 FGFR1OPO95684 399 aaKnown RBP14.32□□□□□ -0.12
SLX4-201ENST00000294008 SRGAP3O43295 1099 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 NOL3O60936 208 aaKnown RBP14.31□□□□□ -0.12
SLX4-201ENST00000294008 GNL1P36915 607 aaPredicted RBP14.31□□□□□ -0.12
SLX4-201ENST00000294008 UBXN4Q92575 508 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 VEZTQ9HBM0 779 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 IFIT1P09914 478 aaKnown RBP14.31□□□□□ -0.12
SLX4-201ENST00000294008 ISM2Q6H9L7 571 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 SULT6B1Q6IMI4 303 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 NUTM1Q86Y26 1132 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
SLX4-201ENST00000294008 RNF34Q969K3 372 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 URI1O94763 535 aaPredicted RBP14.31□□□□□ -0.12
SLX4-201ENST00000294008 IRX5P78411 483 aaPredicted RBP14.31□□□□□ -0.12
SLX4-201ENST00000294008 GTF3C6Q969F1 213 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 NOB1Q9ULX3 412 aaKnown RBP14.31□□□□□ -0.12
SLX4-201ENST00000294008 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 GOLGA8AA7E2F4 631 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 GOLGA8BA8MQT2 603 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 CCDC50Q8IVM0 306 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 PANK2Q9BZ23 570 aa14.31□□□□□ -0.12
SLX4-201ENST00000294008 CASTP20810 708 aaKnown RBP14.3□□□□□ -0.12
SLX4-201ENST00000294008 CALML4Q96GE6 196 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 GPTP24298 496 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 TTC21AQ8NDW8 1320 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 MRE11P49959 708 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 NAA25Q14CX7 972 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 SRCIN1Q9C0H9 1055 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 SEPT10Q9P0V9 454 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 LPXNO60711 386 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 GMNNO75496 209 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 DHX57Q6P158 1386 aaKnown RBP14.3□□□□□ -0.12
SLX4-201ENST00000294008 ANKFY1Q9P2R3 1169 aa14.3□□□□□ -0.12
SLX4-201ENST00000294008 PPP2R5DQ14738 602 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms