RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 JAKMIP1Q96N16 626 aaKnown RBP17.65■□□□□ 0.42
CCNF-201ENST00000293968 ZHX1Q9UKY1 873 aaPredicted RBP17.65■□□□□ 0.42
CCNF-201ENST00000293968 PHAXQ9H814 394 aaKnown RBP17.65■□□□□ 0.42
CCNF-201ENST00000293968 LIMCH1Q9UPQ0 1083 aa17.65■□□□□ 0.42
CCNF-201ENST00000293968 RASEFQ8IZ41 740 aa17.64■□□□□ 0.41
CCNF-201ENST00000293968 SNX14Q9Y5W7 946 aa17.64■□□□□ 0.41
CCNF-201ENST00000293968 UBE2HP62256 183 aa17.64■□□□□ 0.41
CCNF-201ENST00000293968 PRPF40BQ6NWY9 871 aaKnown RBP17.64■□□□□ 0.41
CCNF-201ENST00000293968 CDC42BPGQ6DT37 1551 aa17.63■□□□□ 0.41
CCNF-201ENST00000293968 KIF20BQ96Q89 1820 aa17.63■□□□□ 0.41
CCNF-201ENST00000293968 GJB2P29033 226 aa17.63■□□□□ 0.41
CCNF-201ENST00000293968 HSPA4P34932 840 aa17.63■□□□□ 0.41
CCNF-201ENST00000293968 RHPN1Q8TCX5 695 aa17.63■□□□□ 0.41
CCNF-201ENST00000293968 ANXA1P04083 346 aa17.63■□□□□ 0.41
CCNF-201ENST00000293968 NECAB1Q8N987 351 aa17.63■□□□□ 0.41
CCNF-201ENST00000293968 F13A1P00488 732 aa17.62■□□□□ 0.41
CCNF-201ENST00000293968 HMGN5P82970 282 aaKnown RBP17.62■□□□□ 0.41
CCNF-201ENST00000293968 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
CCNF-201ENST00000293968 PIBF1Q8WXW3 757 aa17.62■□□□□ 0.41
CCNF-201ENST00000293968 EYA1Q99502 592 aa17.62■□□□□ 0.41
CCNF-201ENST00000293968 HDGFP51858 240 aaKnown RBP17.62■□□□□ 0.41
CCNF-201ENST00000293968 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
CCNF-201ENST00000293968 KIF3AQ9Y496 699 aa17.62■□□□□ 0.41
CCNF-201ENST00000293968 LETM1O95202 739 aaPredicted RBP17.62■□□□□ 0.41
CCNF-201ENST00000293968 MYRIPQ8NFW9 859 aa17.62■□□□□ 0.41
CCNF-201ENST00000293968 PDRG1Q9NUG6 133 aa17.62■□□□□ 0.41
CCNF-201ENST00000293968 ANKRD26Q9UPS8 1709 aa17.62■□□□□ 0.41
CCNF-201ENST00000293968 UVSSAQ2YD98 709 aa17.61■□□□□ 0.41
CCNF-201ENST00000293968 SLC26A8Q96RN1 970 aa17.61■□□□□ 0.41
CCNF-201ENST00000293968 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
CCNF-201ENST00000293968 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
CCNF-201ENST00000293968 NLRP6P59044 892 aa17.61■□□□□ 0.41
CCNF-201ENST00000293968 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
CCNF-201ENST00000293968 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
CCNF-201ENST00000293968 KDM4AO75164 1064 aa17.61■□□□□ 0.41
CCNF-201ENST00000293968 FAM69CQ0P6D2 419 aa17.61■□□□□ 0.41
CCNF-201ENST00000293968 SOS1Q07889 1333 aaPredicted RBP17.61■□□□□ 0.41
CCNF-201ENST00000293968 FAM173BQ6P4H8 233 aa17.6■□□□□ 0.41
CCNF-201ENST00000293968 TCEANC2Q96MN5 208 aa17.6■□□□□ 0.41
CCNF-201ENST00000293968 SGSM2O43147 1006 aa17.6■□□□□ 0.41
CCNF-201ENST00000293968 LARGE1O95461 756 aa17.6■□□□□ 0.41
CCNF-201ENST00000293968 CKAP2LQ8IYA6 745 aa17.6■□□□□ 0.41
CCNF-201ENST00000293968 SPDYE4A6NLX3 237 aa17.59■□□□□ 0.41
CCNF-201ENST00000293968 TAF7Q15545 349 aaPredicted RBP17.59■□□□□ 0.41
CCNF-201ENST00000293968 PPP4R3BQ5MIZ7 849 aa17.59■□□□□ 0.41
CCNF-201ENST00000293968 GOLGA6L6A8MZA4 724 aa17.59■□□□□ 0.41
CCNF-201ENST00000293968 KIF1BPQ96EK5 621 aa17.59■□□□□ 0.41
CCNF-201ENST00000293968 STAP2Q9UGK3 403 aa17.59■□□□□ 0.41
CCNF-201ENST00000293968 DIP2CQ9Y2E4 1556 aa17.59■□□□□ 0.41
CCNF-201ENST00000293968 RAD50Q92878 1312 aa17.58■□□□□ 0.41
CCNF-201ENST00000293968 CYP46A1Q9Y6A2 500 aa17.58■□□□□ 0.41
CCNF-201ENST00000293968 IFIT2P09913 472 aaKnown RBP17.58■□□□□ 0.41
CCNF-201ENST00000293968 NBPF7P0C2Y1 421 aaPredicted RBP17.58■□□□□ 0.41
CCNF-201ENST00000293968 STK3Q13188 491 aa17.58■□□□□ 0.41
CCNF-201ENST00000293968 LARP1BQ659C4 914 aaKnown RBP17.58■□□□□ 0.41
CCNF-201ENST00000293968 CCDC94Q9BW85 323 aaPredicted RBP17.58■□□□□ 0.41
CCNF-201ENST00000293968 CCDC192P0DO97 292 aa17.58■□□□□ 0.4
CCNF-201ENST00000293968 PRIMPOLQ96LW4 560 aa17.58■□□□□ 0.4
CCNF-201ENST00000293968 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.4
CCNF-201ENST00000293968 CRB1P82279 1406 aa17.58■□□□□ 0.4
CCNF-201ENST00000293968 SALL3Q9BXA9 1300 aa17.58■□□□□ 0.4
CCNF-201ENST00000293968 ZKSCAN1P17029 563 aaPredicted RBP17.58■□□□□ 0.4
CCNF-201ENST00000293968 RUFY2Q8WXA3 655 aa17.57■□□□□ 0.4
CCNF-201ENST00000293968 C9orf78Q9NZ63 289 aaPredicted RBP17.57■□□□□ 0.4
CCNF-201ENST00000293968 TFIP11Q9UBB9 837 aaKnown RBP17.57■□□□□ 0.4
CCNF-201ENST00000293968 CLASRPQ8N2M8 674 aaKnown RBP17.57■□□□□ 0.4
CCNF-201ENST00000293968 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
CCNF-201ENST00000293968 RAB11FIP3O75154 756 aa17.56■□□□□ 0.4
CCNF-201ENST00000293968 PYCARDQ9ULZ3 195 aa17.56■□□□□ 0.4
CCNF-201ENST00000293968 PI4KAP2A4QPH2 592 aa17.56■□□□□ 0.4
CCNF-201ENST00000293968 ADCK5Q3MIX3 580 aa17.56■□□□□ 0.4
CCNF-201ENST00000293968 PI4KAP1Q8N8J0 262 aa17.56■□□□□ 0.4
CCNF-201ENST00000293968 FOSBP53539 338 aa17.55■□□□□ 0.4
CCNF-201ENST00000293968 LSG1Q9H089 658 aaKnown RBP17.55■□□□□ 0.4
CCNF-201ENST00000293968 NEO1Q92859 1461 aa17.55■□□□□ 0.4
CCNF-201ENST00000293968 PTH1RQ03431 593 aa17.55■□□□□ 0.4
CCNF-201ENST00000293968 ZNF592Q92610 1267 aa17.55■□□□□ 0.4
CCNF-201ENST00000293968 GPATCH3Q96I76 525 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 TRIM5Q9C035 493 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
CCNF-201ENST00000293968 PTGS1P23219 599 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 LUZP1Q86V48 1076 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 PDCL2Q8N4E4 241 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 NUP62CLQ9H1M0 184 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 SSH2Q76I76 1423 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 BICD2Q8TD16 824 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 SSH3Q8TE77 659 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 IL17REQ8NFR9 667 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 PI4K2BQ8TCG2 481 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 CHPF2Q9P2E5 772 aa17.54■□□□□ 0.4
CCNF-201ENST00000293968 DLG5Q8TDM6 1919 aa17.53■□□□□ 0.4
CCNF-201ENST00000293968 KRT85P78386 507 aa17.53■□□□□ 0.4
CCNF-201ENST00000293968 AACSQ86V21 672 aa17.53■□□□□ 0.4
CCNF-201ENST00000293968 TNMDQ9H2S6 317 aa17.53■□□□□ 0.4
CCNF-201ENST00000293968 GLRX3O76003 335 aaKnown RBP17.53■□□□□ 0.4
CCNF-201ENST00000293968 A2ML1A8K2U0 1454 aa17.53■□□□□ 0.4
CCNF-201ENST00000293968 CEBPZQ03701 1054 aaKnown RBP17.53■□□□□ 0.4
CCNF-201ENST00000293968 MAP3K11Q16584 847 aa17.53■□□□□ 0.4
CCNF-201ENST00000293968 C16orf45Q96MC5 204 aaPredicted RBP17.53■□□□□ 0.4
CCNF-201ENST00000293968 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms